RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W RIB2Q12362 591 aaKnown RBP5.89□□□□□ -1.47
ROT1YMR200W DAS1P47005 663 aa5.88□□□□□ -1.47
ROT1YMR200W TYW3P53177 273 aa5.88□□□□□ -1.47
ROT1YMR200W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
ROT1YMR200W FLC1Q08967 793 aa5.88□□□□□ -1.47
ROT1YMR200W ERR1P0CX10 437 aa5.87□□□□□ -1.47
ROT1YMR200W ERR2P0CX11 437 aa5.87□□□□□ -1.47
ROT1YMR200W MCM7P38132 845 aa5.87□□□□□ -1.47
ROT1YMR200W YHR020WP38708 688 aaKnown RBP5.87□□□□□ -1.47
ROT1YMR200W SPF1P39986 1215 aaKnown RBP5.87□□□□□ -1.47
ROT1YMR200W HNT2P49775 206 aa5.87□□□□□ -1.47
ROT1YMR200W ENV11P53246 860 aa5.87□□□□□ -1.47
ROT1YMR200W EEB1Q02891 456 aa5.87□□□□□ -1.47
ROT1YMR200W SGD1Q06132 899 aa5.87□□□□□ -1.47
ROT1YMR200W OPI10Q08202 246 aa5.87□□□□□ -1.47
ROT1YMR200W NYV1Q12255 253 aa5.87□□□□□ -1.47
ROT1YMR200W TMA7Q3E764 64 aaKnown RBP5.87□□□□□ -1.47
ROT1YMR200W SFP1P32432 683 aa5.86□□□□□ -1.47
ROT1YMR200W LAM1P38851 1228 aa5.86□□□□□ -1.47
ROT1YMR200W SNF7P39929 240 aaKnown RBP5.86□□□□□ -1.47
ROT1YMR200W RSP5P39940 809 aaKnown RBP5.86□□□□□ -1.47
ROT1YMR200W MXR1P40029 184 aa5.86□□□□□ -1.47
ROT1YMR200W PLB2Q03674 706 aa5.86□□□□□ -1.47
ROT1YMR200W ERP4Q12450 207 aa5.86□□□□□ -1.47
ROT1YMR200W TMA17Q12513 150 aa5.86□□□□□ -1.47
ROT1YMR200W TRP2P00899 507 aaKnown RBP5.85□□□□□ -1.47
ROT1YMR200W BAS1P22035 811 aa5.85□□□□□ -1.47
ROT1YMR200W DBP2P24783 546 aaKnown RBP5.85□□□□□ -1.47
ROT1YMR200W CDC11P32458 415 aa5.85□□□□□ -1.47
ROT1YMR200W YFR016CP43597 1233 aaKnown RBP5.85□□□□□ -1.47
ROT1YMR200W YGR021WP53212 290 aa5.85□□□□□ -1.47
ROT1YMR200W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
ROT1YMR200W ROT1Q03691 256 aa5.85□□□□□ -1.47
ROT1YMR200W GNT1Q12096 491 aa5.85□□□□□ -1.47
ROT1YMR200W GAL10P04397 699 aa5.84□□□□□ -1.47
ROT1YMR200W CDC34P14682 295 aa5.84□□□□□ -1.47
ROT1YMR200W RPL8AP17076 256 aaKnown RBP5.84□□□□□ -1.47
ROT1YMR200W MOT2P34909 587 aaKnown RBP5.84□□□□□ -1.47
ROT1YMR200W YKL069WP36088 180 aa5.84□□□□□ -1.47
ROT1YMR200W RFC5P38251 354 aa5.84□□□□□ -1.47
ROT1YMR200W MEF2P39677 819 aa5.84□□□□□ -1.47
ROT1YMR200W YGR125WP53273 1036 aa5.84□□□□□ -1.47
ROT1YMR200W GCN5Q03330 439 aa5.84□□□□□ -1.47
ROT1YMR200W TMA46Q12000 345 aaKnown RBP5.84□□□□□ -1.47
ROT1YMR200W YPL066WQ12194 479 aa5.84□□□□□ -1.47
ROT1YMR200W SVS1Q12254 260 aa5.84□□□□□ -1.47
ROT1YMR200W RPL11AP0C0W9 174 aaKnown RBP5.83□□□□□ -1.48
ROT1YMR200W CMP2P14747 604 aa5.83□□□□□ -1.48
ROT1YMR200W YEF3P16521 1044 aaKnown RBP5.83□□□□□ -1.48
ROT1YMR200W LYP1P32487 611 aa5.83□□□□□ -1.48
ROT1YMR200W RPS0AP32905 252 aaKnown RBP5.83□□□□□ -1.48
ROT1YMR200W MTC2P34246 357 aa5.83□□□□□ -1.48
ROT1YMR200W RPS0BP46654 252 aaKnown RBP5.83□□□□□ -1.48
ROT1YMR200W YJR120WP47157 116 aa5.83□□□□□ -1.48
ROT1YMR200W SPT20P50875 604 aa5.83□□□□□ -1.48
ROT1YMR200W SND1Q04007 877 aa5.83□□□□□ -1.48
ROT1YMR200W NTG2Q08214 380 aa5.83□□□□□ -1.48
ROT1YMR200W FAL1Q12099 399 aaKnown RBP5.83□□□□□ -1.48
ROT1YMR200W RPL11BQ3E757 174 aaPredicted RBP5.83□□□□□ -1.48
ROT1YMR200W PRE10P21242 288 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
ROT1YMR200W HIR1P32479 840 aa5.82□□□□□ -1.48
ROT1YMR200W BLI1P35727 113 aa5.82□□□□□ -1.48
ROT1YMR200W HLJ1P48353 224 aa5.82□□□□□ -1.48
ROT1YMR200W YGR237CP50089 785 aa5.82□□□□□ -1.48
ROT1YMR200W RSM24Q03976 319 aa5.82□□□□□ -1.48
ROT1YMR200W DUS4Q06063 367 aa5.82□□□□□ -1.48
ROT1YMR200W OSH2Q12451 1283 aa5.82□□□□□ -1.48
ROT1YMR200W BI4P03879 638 aa5.81□□□□□ -1.48
ROT1YMR200W ATP4P05626 244 aa5.81□□□□□ -1.48
ROT1YMR200W NFU1P32860 256 aa5.81□□□□□ -1.48
ROT1YMR200W SLA2P33338 968 aa5.81□□□□□ -1.48
ROT1YMR200W UGA2P38067 497 aa5.81□□□□□ -1.48
ROT1YMR200W VID27P40157 782 aa5.81□□□□□ -1.48
ROT1YMR200W YGR053CP53234 283 aa5.81□□□□□ -1.48
ROT1YMR200W CLU1Q03690 1277 aaKnown RBP5.81□□□□□ -1.48
ROT1YMR200W ATG13Q06628 738 aa5.81□□□□□ -1.48
ROT1YMR200W YOR352WQ08816 343 aa5.81□□□□□ -1.48
ROT1YMR200W INO1P11986 533 aa5.8□□□□□ -1.48
ROT1YMR200W MSH2P25847 964 aa5.8□□□□□ -1.48
ROT1YMR200W GGA2P38817 585 aaKnown RBP5.8□□□□□ -1.48
ROT1YMR200W PNT1P38969 423 aa5.8□□□□□ -1.48
ROT1YMR200W SPO75Q07798 868 aa5.8□□□□□ -1.48
ROT1YMR200W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
ROT1YMR200W ACM1Q08981 209 aa5.8□□□□□ -1.48
ROT1YMR200W NUP145P49687 1317 aa5.79□□□□□ -1.48
ROT1YMR200W CIT1P00890 479 aa5.79□□□□□ -1.48
ROT1YMR200W CAN1P04817 590 aa5.79□□□□□ -1.48
ROT1YMR200W CDC6P09119 513 aa5.79□□□□□ -1.48
ROT1YMR200W ACE2P21192 770 aa5.79□□□□□ -1.48
ROT1YMR200W APL1P27351 700 aa5.79□□□□□ -1.48
ROT1YMR200W IES5P40060 125 aa5.79□□□□□ -1.48
ROT1YMR200W MDM1Q01846 1127 aa5.79□□□□□ -1.48
ROT1YMR200W TFB2Q02939 513 aa5.79□□□□□ -1.48
ROT1YMR200W ESC2Q06340 456 aa5.79□□□□□ -1.48
ROT1YMR200W SPP382Q06411 708 aaPredicted RBP5.79□□□□□ -1.48
ROT1YMR200W YLR358CO13565 187 aa5.78□□□□□ -1.48
ROT1YMR200W PIF1P07271 859 aa5.78□□□□□ -1.48
ROT1YMR200W HSP60P19882 572 aaKnown RBP5.78□□□□□ -1.48
ROT1YMR200W CTS1P29029 562 aa5.78□□□□□ -1.48
ROT1YMR200W YBR184WP38299 523 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms