RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR046C	YMR046C	ERR2	P0CX11	437 aa		4.6	□□□□□ -1.67
YMR046C	YMR046C	TOP3	P13099	656 aa		4.6	□□□□□ -1.67
YMR046C	YMR046C	NPP1	P25353	742 aa		4.6	□□□□□ -1.67
YMR046C	YMR046C	APL1	P27351	700 aa		4.6	□□□□□ -1.67
YMR046C	YMR046C	BET3	P36149	193 aa		4.6	□□□□□ -1.67
YMR046C	YMR046C	AIM3	P38266	947 aa	Known RBP	4.6	□□□□□ -1.67
YMR046C	YMR046C	GIC1	P38785	314 aa		4.6	□□□□□ -1.67
YMR046C	YMR046C	SRT1	Q03175	343 aa		4.6	□□□□□ -1.67
YMR046C	YMR046C	RSM24	Q03976	319 aa		4.6	□□□□□ -1.67
YMR046C	YMR046C	OSW2	Q12202	724 aa		4.6	□□□□□ -1.67
YMR046C	YMR046C	MSD1	P15179	658 aa	Known RBP	4.59	□□□□□ -1.67
YMR046C	YMR046C	SCT1	P32784	759 aa		4.59	□□□□□ -1.67
YMR046C	YMR046C	PPG1	P32838	368 aa		4.59	□□□□□ -1.67
YMR046C	YMR046C	AFR1	P33304	620 aa		4.59	□□□□□ -1.67
YMR046C	YMR046C	ERT1	P38140	529 aa		4.59	□□□□□ -1.67
YMR046C	YMR046C	ETP1	P38748	585 aa	Known RBP	4.59	□□□□□ -1.67
YMR046C	YMR046C	GYP7	P48365	746 aa		4.59	□□□□□ -1.67
YMR046C	YMR046C	LCD1	Q04377	747 aa		4.59	□□□□□ -1.67
YMR046C	YMR046C	TOM70	P07213	617 aa	Known RBP	4.58	□□□□□ -1.68
YMR046C	YMR046C	PHO8	P11491	566 aa		4.58	□□□□□ -1.68
YMR046C	YMR046C	KIN2	P13186	1147 aa	Known RBP	4.58	□□□□□ -1.68
YMR046C	YMR046C	FUN30	P31380	1131 aa		4.58	□□□□□ -1.68
YMR046C	YMR046C	DOM34	P33309	386 aa		4.58	□□□□□ -1.68
YMR046C	YMR046C	PET10	P36139	283 aa		4.58	□□□□□ -1.68
YMR046C	YMR046C	NPP2	P39997	493 aa		4.58	□□□□□ -1.68
YMR046C	YMR046C	ENV11	P53246	860 aa		4.58	□□□□□ -1.68
YMR046C	YMR046C	XYL2	Q07993	356 aa		4.58	□□□□□ -1.68
YMR046C	YMR046C	RIB2	Q12362	591 aa	Known RBP	4.58	□□□□□ -1.68
YMR046C	YMR046C	CMP2	P14747	604 aa		4.57	□□□□□ -1.68
YMR046C	YMR046C	YKR078W	P36158	585 aa	Known RBP	4.57	□□□□□ -1.68
YMR046C	YMR046C	TSL1	P38427	1098 aa	Known RBP	4.57	□□□□□ -1.68
YMR046C	YMR046C	NMD2	P38798	1089 aa	Known RBP	4.57	□□□□□ -1.68
YMR046C	YMR046C	YER158C	P40095	573 aa		4.57	□□□□□ -1.68
YMR046C	YMR046C	TOK1	P40310	691 aa		4.57	□□□□□ -1.68
YMR046C	YMR046C	UBP6	P43593	499 aa	Known RBP	4.57	□□□□□ -1.68
YMR046C	YMR046C	SFB2	P53953	876 aa		4.57	□□□□□ -1.68
YMR046C	YMR046C	BUL2	Q03758	920 aa	Known RBP	4.57	□□□□□ -1.68
YMR046C	YMR046C	YPR196W	Q06595	470 aa		4.57	□□□□□ -1.68
YMR046C	YMR046C	YLR125W	Q12138	136 aa		4.57	□□□□□ -1.68
YMR046C	YMR046C	CYC1	P00044	109 aa	Predicted RBP	4.56	□□□□□ -1.68
YMR046C	YMR046C	CDC48	P25694	835 aa	Known RBP	4.56	□□□□□ -1.68
YMR046C	YMR046C	REC104	P33323	182 aa		4.56	□□□□□ -1.68
YMR046C	YMR046C	YAP1801	P38856	637 aa		4.56	□□□□□ -1.68
YMR046C	YMR046C	CCM1	P48237	864 aa	Predicted RBP	4.56	□□□□□ -1.68
YMR046C	YMR046C	ALG12	P53730	551 aa		4.56	□□□□□ -1.68
YMR046C	YMR046C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
YMR046C	YMR046C	YDL177C	Q12257	170 aa		4.56	□□□□□ -1.68
YMR046C	YMR046C	MET6	P05694	767 aa	Known RBP	4.55	□□□□□ -1.68
YMR046C	YMR046C	SRM1	P21827	482 aa		4.55	□□□□□ -1.68
YMR046C	YMR046C	THI4	P32318	326 aa		4.55	□□□□□ -1.68
YMR046C	YMR046C	RRP14	P36080	434 aa	Known RBP	4.55	□□□□□ -1.68
YMR046C	YMR046C	ECM21	P38167	1117 aa	Known RBP	4.55	□□□□□ -1.68
YMR046C	YMR046C	RIM8	P53179	542 aa		4.55	□□□□□ -1.68
YMR046C	YMR046C	MSC2	Q03455	724 aa		4.55	□□□□□ -1.68
YMR046C	YMR046C	SIZ1	Q04195	904 aa		4.55	□□□□□ -1.68
YMR046C	YMR046C	GAL10	P04397	699 aa		4.54	□□□□□ -1.68
YMR046C	YMR046C	GDH3	P39708	457 aa		4.54	□□□□□ -1.68
YMR046C	YMR046C	HSV2	P50079	448 aa	Predicted RBP	4.54	□□□□□ -1.68
YMR046C	YMR046C	ENA1	P13587	1091 aa		4.53	□□□□□ -1.68
YMR046C	YMR046C	YKE2	P52553	114 aa		4.53	□□□□□ -1.68
YMR046C	YMR046C	SNO2	P53823	222 aa		4.53	□□□□□ -1.68
YMR046C	YMR046C	MRPL22	P53881	309 aa		4.53	□□□□□ -1.68
YMR046C	YMR046C	ENA2	Q01896	1091 aa		4.53	□□□□□ -1.68
YMR046C	YMR046C	YOR352W	Q08816	343 aa		4.53	□□□□□ -1.68
YMR046C	YMR046C	PNS1	Q12412	539 aa		4.53	□□□□□ -1.68
YMR046C	YMR046C	ENA5	Q12691	1091 aa		4.53	□□□□□ -1.68
YMR046C	YMR046C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
YMR046C	YMR046C	RPC82	P32349	654 aa		4.52	□□□□□ -1.69
YMR046C	YMR046C	SRP101	P32916	621 aa		4.52	□□□□□ -1.69
YMR046C	YMR046C	YBR238C	P38330	731 aa	Known RBP	4.52	□□□□□ -1.69
YMR046C	YMR046C	ZRG8	P40021	1076 aa		4.52	□□□□□ -1.69
YMR046C	YMR046C	ALG2	P43636	503 aa		4.52	□□□□□ -1.69
YMR046C	YMR046C	ROT1	Q03691	256 aa		4.52	□□□□□ -1.69
YMR046C	YMR046C	SGD1	Q06132	899 aa		4.52	□□□□□ -1.69
YMR046C	YMR046C	TUB2	P02557	457 aa	Known RBP	4.51	□□□□□ -1.69
YMR046C	YMR046C	TOD6	P34219	525 aa		4.51	□□□□□ -1.69
YMR046C	YMR046C	MAL11	P53048	616 aa		4.51	□□□□□ -1.69
YMR046C	YMR046C	YGR012W	P53206	393 aa		4.51	□□□□□ -1.69
YMR046C	YMR046C	PLB2	Q03674	706 aa		4.51	□□□□□ -1.69
YMR046C	YMR046C	POB3	Q04636	552 aa	Known RBP	4.51	□□□□□ -1.69
YMR046C	YMR046C	ENV7	Q12003	364 aa		4.51	□□□□□ -1.69
YMR046C	YMR046C	NOT3	P06102	836 aa	Known RBP	4.5	□□□□□ -1.69
YMR046C	YMR046C	HSF1	P10961	833 aa		4.5	□□□□□ -1.69
YMR046C	YMR046C	RAD53	P22216	821 aa		4.5	□□□□□ -1.69
YMR046C	YMR046C	RFA1	P22336	621 aa	Known RBP	4.5	□□□□□ -1.69
YMR046C	YMR046C	MSH2	P25847	964 aa		4.5	□□□□□ -1.69
YMR046C	YMR046C	LAM1	P38851	1228 aa		4.5	□□□□□ -1.69
YMR046C	YMR046C	GYP8	P43570	497 aa		4.5	□□□□□ -1.69
YMR046C	YMR046C	NIT3	P49954	291 aa		4.5	□□□□□ -1.69
YMR046C	YMR046C	YGR283C	P53336	341 aa	Predicted RBP	4.5	□□□□□ -1.69
YMR046C	YMR046C	CDA1	Q06702	301 aa		4.5	□□□□□ -1.69
YMR046C	YMR046C	MPH2	P0CD99	609 aa		4.49	□□□□□ -1.69
YMR046C	YMR046C	BRN1	P38170	754 aa		4.49	□□□□□ -1.69
YMR046C	YMR046C	MND2	P40577	368 aa		4.49	□□□□□ -1.69
YMR046C	YMR046C	GTF1	P53260	183 aa	Predicted RBP	4.49	□□□□□ -1.69
YMR046C	YMR046C	DAM1	P53267	343 aa		4.49	□□□□□ -1.69
YMR046C	YMR046C	SPC29	P33419	253 aa		4.48	□□□□□ -1.69
YMR046C	YMR046C	EMC3	P36039	253 aa		4.48	□□□□□ -1.69
YMR046C	YMR046C	MNN1	P39106	762 aa		4.48	□□□□□ -1.69
YMR046C	YMR046C	MEF2	P39677	819 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 55 ms