RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C DOM34P33309 386 aa6.4□□□□□ -1.38
BLS1YLR408C POL12P38121 705 aaPredicted RBP6.4□□□□□ -1.38
BLS1YLR408C ECM21P38167 1117 aaKnown RBP6.4□□□□□ -1.38
BLS1YLR408C ETP1P38748 585 aaKnown RBP6.4□□□□□ -1.38
BLS1YLR408C NMD2P38798 1089 aaKnown RBP6.4□□□□□ -1.38
BLS1YLR408C TOK1P40310 691 aa6.4□□□□□ -1.38
BLS1YLR408C UBP6P43593 499 aaKnown RBP6.4□□□□□ -1.38
BLS1YLR408C ECL1P48235 211 aa6.4□□□□□ -1.38
BLS1YLR408C TIM23P32897 222 aa6.39□□□□□ -1.39
BLS1YLR408C YER158CP40095 573 aa6.39□□□□□ -1.39
BLS1YLR408C CCM1P48237 864 aaPredicted RBP6.39□□□□□ -1.39
BLS1YLR408C RNH70P53331 553 aa6.39□□□□□ -1.39
BLS1YLR408C CYC1P00044 109 aaPredicted RBP6.38□□□□□ -1.39
BLS1YLR408C ERR1P0CX10 437 aa6.38□□□□□ -1.39
BLS1YLR408C ERR2P0CX11 437 aa6.38□□□□□ -1.39
BLS1YLR408C CDC48P25694 835 aaKnown RBP6.38□□□□□ -1.39
BLS1YLR408C RRP14P36080 434 aaKnown RBP6.38□□□□□ -1.39
BLS1YLR408C SFB2P53953 876 aa6.38□□□□□ -1.39
BLS1YLR408C REC104P33323 182 aa6.37□□□□□ -1.39
BLS1YLR408C ERT1P38140 529 aa6.37□□□□□ -1.39
BLS1YLR408C SNO2P53823 222 aa6.37□□□□□ -1.39
BLS1YLR408C YLR125WQ12138 136 aa6.37□□□□□ -1.39
BLS1YLR408C AIM44Q99299 758 aa6.37□□□□□ -1.39
BLS1YLR408C GLT1Q12680 2145 aaKnown RBP6.37□□□□□ -1.39
BLS1YLR408C PHO8P11491 566 aa6.36□□□□□ -1.39
BLS1YLR408C CMP2P14747 604 aa6.36□□□□□ -1.39
BLS1YLR408C GDH3P39708 457 aa6.36□□□□□ -1.39
BLS1YLR408C GAL10P04397 699 aa6.35□□□□□ -1.39
BLS1YLR408C TSA1P34760 196 aaKnown RBP6.35□□□□□ -1.39
BLS1YLR408C MAL11P53048 616 aa6.35□□□□□ -1.39
BLS1YLR408C MRPL22P53881 309 aa6.35□□□□□ -1.39
BLS1YLR408C PLB2Q03674 706 aa6.35□□□□□ -1.39
BLS1YLR408C SGD1Q06132 899 aa6.35□□□□□ -1.39
BLS1YLR408C TOM70P07213 617 aaKnown RBP6.34□□□□□ -1.39
BLS1YLR408C SEG2P34250 1132 aa6.34□□□□□ -1.39
BLS1YLR408C LAM1P38851 1228 aa6.34□□□□□ -1.39
BLS1YLR408C ALG12P53730 551 aa6.34□□□□□ -1.39
BLS1YLR408C CDA1Q06702 301 aa6.34□□□□□ -1.39
BLS1YLR408C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
BLS1YLR408C ENV7Q12003 364 aa6.33□□□□□ -1.4
BLS1YLR408C HSF1P10961 833 aa6.32□□□□□ -1.4
BLS1YLR408C MSH2P25847 964 aa6.32□□□□□ -1.4
BLS1YLR408C MEF2P39677 819 aa6.32□□□□□ -1.4
BLS1YLR408C MND2P40577 368 aa6.32□□□□□ -1.4
BLS1YLR408C ALG2P43636 503 aa6.32□□□□□ -1.4
BLS1YLR408C YGR012WP53206 393 aa6.32□□□□□ -1.4
BLS1YLR408C YGR283CP53336 341 aaPredicted RBP6.32□□□□□ -1.4
BLS1YLR408C YDR132CQ03900 495 aa6.32□□□□□ -1.4
BLS1YLR408C DUS4Q06063 367 aa6.32□□□□□ -1.4
BLS1YLR408C CDA2Q06703 312 aa6.32□□□□□ -1.4
BLS1YLR408C PPG1P32838 368 aa6.31□□□□□ -1.4
BLS1YLR408C ZRG8P40021 1076 aa6.31□□□□□ -1.4
BLS1YLR408C NIT1P40447 199 aa6.31□□□□□ -1.4
BLS1YLR408C HSV2P50079 448 aaPredicted RBP6.31□□□□□ -1.4
BLS1YLR408C YPR196WQ06595 470 aa6.31□□□□□ -1.4
BLS1YLR408C MET6P05694 767 aaKnown RBP6.3□□□□□ -1.4
BLS1YLR408C CDC6P09119 513 aa6.3□□□□□ -1.4
BLS1YLR408C THI4P32318 326 aa6.3□□□□□ -1.4
BLS1YLR408C EMC3P36039 253 aa6.3□□□□□ -1.4
BLS1YLR408C PBP1P53297 722 aaKnown RBP6.3□□□□□ -1.4
BLS1YLR408C ROT1Q03691 256 aa6.3□□□□□ -1.4
BLS1YLR408C NOT3P06102 836 aaKnown RBP6.29□□□□□ -1.4
BLS1YLR408C ELM1P32801 640 aa6.29□□□□□ -1.4
BLS1YLR408C SRP101P32916 621 aa6.29□□□□□ -1.4
BLS1YLR408C STE13P33894 931 aa6.29□□□□□ -1.4
BLS1YLR408C GYP8P43570 497 aa6.29□□□□□ -1.4
BLS1YLR408C DAM1P53267 343 aa6.29□□□□□ -1.4
BLS1YLR408C DOS2P54858 310 aa6.29□□□□□ -1.4
BLS1YLR408C ATP25Q03153 612 aa6.29□□□□□ -1.4
BLS1YLR408C GCN5Q03330 439 aa6.29□□□□□ -1.4
BLS1YLR408C POB3Q04636 552 aaKnown RBP6.29□□□□□ -1.4
BLS1YLR408C ADY3Q07732 790 aa6.29□□□□□ -1.4
BLS1YLR408C TPO1Q07824 586 aa6.29□□□□□ -1.4
BLS1YLR408C MDM12Q92328 271 aa6.29□□□□□ -1.4
BLS1YLR408C MPH2P0CD99 609 aa6.28□□□□□ -1.4
BLS1YLR408C SPC29P33419 253 aa6.28□□□□□ -1.4
BLS1YLR408C RAI1P53063 387 aaKnown RBP6.28□□□□□ -1.4
BLS1YLR408C UGO1Q03327 502 aa6.28□□□□□ -1.4
BLS1YLR408C YOR352WQ08816 343 aa6.28□□□□□ -1.4
BLS1YLR408C SOD2P00447 233 aa6.27□□□□□ -1.41
BLS1YLR408C PHR1P05066 565 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
BLS1YLR408C ENA1P13587 1091 aa6.27□□□□□ -1.41
BLS1YLR408C RAD53P22216 821 aa6.27□□□□□ -1.41
BLS1YLR408C MET12P46151 657 aa6.27□□□□□ -1.41
BLS1YLR408C TY4A-JP47023 414 aa6.27□□□□□ -1.41
BLS1YLR408C NIT3P49954 291 aa6.27□□□□□ -1.41
BLS1YLR408C VPS62P53285 467 aa6.27□□□□□ -1.41
BLS1YLR408C NRD1P53617 575 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
BLS1YLR408C HDA1P53973 706 aa6.27□□□□□ -1.41
BLS1YLR408C ENA2Q01896 1091 aa6.27□□□□□ -1.41
BLS1YLR408C YPL277CQ08989 487 aa6.27□□□□□ -1.41
BLS1YLR408C ENA5Q12691 1091 aa6.27□□□□□ -1.41
BLS1YLR408C SPE1P08432 466 aa6.26□□□□□ -1.41
BLS1YLR408C FBP1P09201 348 aa6.26□□□□□ -1.41
BLS1YLR408C GAS1P22146 559 aaKnown RBP6.26□□□□□ -1.41
BLS1YLR408C ATG19P35193 415 aa6.26□□□□□ -1.41
BLS1YLR408C POA1P38218 177 aa6.26□□□□□ -1.41
BLS1YLR408C RIM8P53179 542 aa6.26□□□□□ -1.41
BLS1YLR408C GPB1Q08886 897 aa6.26□□□□□ -1.41
BLS1YLR408C HMI1Q12039 706 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms