RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C TYS1P36421 394 aaKnown RBP2.89□□□□□ -1.95
UBP11YKR098C GIC1P38785 314 aa2.89□□□□□ -1.95
UBP11YKR098C NOP2P40991 618 aaKnown RBP2.89□□□□□ -1.95
UBP11YKR098C MET13P53128 600 aa2.89□□□□□ -1.95
UBP11YKR098C DAM1P53267 343 aa2.89□□□□□ -1.95
UBP11YKR098C YNR014WP53719 212 aa2.89□□□□□ -1.95
UBP11YKR098C SRT1Q03175 343 aa2.89□□□□□ -1.95
UBP11YKR098C MET7Q08645 548 aa2.89□□□□□ -1.95
UBP11YKR098C FAP7Q12055 197 aaPredicted RBP2.89□□□□□ -1.95
UBP11YKR098C YVC1Q12324 675 aa2.89□□□□□ -1.95
UBP11YKR098C COQ4O13525 335 aa2.88□□□□□ -1.95
UBP11YKR098C ACE2P21192 770 aa2.88□□□□□ -1.95
UBP11YKR098C MCD4P36051 919 aa2.88□□□□□ -1.95
UBP11YKR098C YBR238CP38330 731 aaKnown RBP2.88□□□□□ -1.95
UBP11YKR098C PIK1P39104 1066 aa2.88□□□□□ -1.95
UBP11YKR098C YER158CP40095 573 aa2.88□□□□□ -1.95
UBP11YKR098C GPP1P41277 250 aaKnown RBP2.88□□□□□ -1.95
UBP11YKR098C YGR035CP53222 116 aa2.88□□□□□ -1.95
UBP11YKR098C MTQ2Q03920 221 aaPredicted RBP2.88□□□□□ -1.95
UBP11YKR098C AI1P03875 834 aa2.88□□□□□ -1.95
UBP11YKR098C SRO9P25567 434 aaKnown RBP2.88□□□□□ -1.95
UBP11YKR098C RSC6P25632 483 aa2.88□□□□□ -1.95
UBP11YKR098C CDC48P25694 835 aaKnown RBP2.88□□□□□ -1.95
UBP11YKR098C FUN30P31380 1131 aa2.88□□□□□ -1.95
UBP11YKR098C EUG1P32474 517 aa2.88□□□□□ -1.95
UBP11YKR098C STO1P34160 861 aaKnown RBP2.88□□□□□ -1.95
UBP11YKR098C YHL012WP38709 493 aa2.88□□□□□ -1.95
UBP11YKR098C RRT14P40470 206 aa2.88□□□□□ -1.95
UBP11YKR098C SFB2P53953 876 aa2.88□□□□□ -1.95
UBP11YKR098C HFD1Q04458 532 aa2.88□□□□□ -1.95
UBP11YKR098C YBR071WP38243 211 aa2.87□□□□□ -1.95
UBP11YKR098C CCZ1P38273 704 aa2.87□□□□□ -1.95
UBP11YKR098C PCM1P38628 557 aaKnown RBP2.87□□□□□ -1.95
UBP11YKR098C NIT1P40447 199 aa2.87□□□□□ -1.95
UBP11YKR098C YFL066CP43538 392 aa2.87□□□□□ -1.95
UBP11YKR098C NIT3P49954 291 aa2.87□□□□□ -1.95
UBP11YKR098C ARI1P53111 347 aaKnown RBP2.87□□□□□ -1.95
UBP11YKR098C COG6P53959 839 aa2.87□□□□□ -1.95
UBP11YKR098C YDR514CQ04408 483 aa2.87□□□□□ -1.95
UBP11YKR098C COG8Q04632 607 aa2.87□□□□□ -1.95
UBP11YKR098C MPH2P0CD99 609 aa2.87□□□□□ -1.95
UBP11YKR098C PER1P25625 357 aa2.87□□□□□ -1.95
UBP11YKR098C TRK2P28584 889 aa2.87□□□□□ -1.95
UBP11YKR098C HOG1P32485 435 aa2.87□□□□□ -1.95
UBP11YKR098C SEC6P32844 805 aa2.87□□□□□ -1.95
UBP11YKR098C MMM1P41800 426 aa2.87□□□□□ -1.95
UBP11YKR098C YJR096WP47137 282 aa2.87□□□□□ -1.95
UBP11YKR098C SNP1Q00916 300 aaPredicted RBP2.87□□□□□ -1.95
UBP11YKR098C ATG33Q06485 197 aa2.87□□□□□ -1.95
UBP11YKR098C NAM7P30771 971 aaKnown RBP2.86□□□□□ -1.95
UBP11YKR098C MDL2P33311 773 aa2.86□□□□□ -1.95
UBP11YKR098C WHI3P34761 661 aaKnown RBP2.86□□□□□ -1.95
UBP11YKR098C MCX1P38323 520 aaPredicted RBP2.86□□□□□ -1.95
UBP11YKR098C CKB2P38930 258 aa2.86□□□□□ -1.95
UBP11YKR098C HXT16P47185 567 aa2.86□□□□□ -1.95
UBP11YKR098C HFM1P51979 1187 aa2.86□□□□□ -1.95
UBP11YKR098C AIM14P53109 570 aa2.86□□□□□ -1.95
UBP11YKR098C TDA6Q06466 467 aa2.86□□□□□ -1.95
UBP11YKR098C GUD1Q07729 489 aa2.86□□□□□ -1.95
UBP11YKR098C RSC58Q07979 502 aa2.86□□□□□ -1.95
UBP11YKR098C XYL2Q07993 356 aa2.86□□□□□ -1.95
UBP11YKR098C MIH1P23748 554 aa2.85□□□□□ -1.95
UBP11YKR098C PRP19P32523 503 aaKnown RBP2.85□□□□□ -1.95
UBP11YKR098C YAP1801P38856 637 aa2.85□□□□□ -1.95
UBP11YKR098C PMC1P38929 1173 aaPredicted RBP2.85□□□□□ -1.95
UBP11YKR098C CIT3P43635 486 aa2.85□□□□□ -1.95
UBP11YKR098C PRY1P47032 299 aa2.85□□□□□ -1.95
UBP11YKR098C TAD1P53065 400 aa2.85□□□□□ -1.95
UBP11YKR098C SDH1Q00711 640 aa2.85□□□□□ -1.95
UBP11YKR098C SND1Q04007 877 aa2.85□□□□□ -1.95
UBP11YKR098C YPR196WQ06595 470 aa2.85□□□□□ -1.95
UBP11YKR098C REH1Q06709 432 aa2.85□□□□□ -1.95
UBP11YKR098C NBA1Q08229 501 aaKnown RBP2.85□□□□□ -1.95
UBP11YKR098C YOR059CQ08448 450 aaKnown RBP2.85□□□□□ -1.95
UBP11YKR098C GUP2Q08929 609 aa2.85□□□□□ -1.95
UBP11YKR098C SVS1Q12254 260 aa2.85□□□□□ -1.95
UBP11YKR098C GIN4Q12263 1142 aa2.85□□□□□ -1.95
UBP11YKR098C HMG1P12683 1054 aa2.85□□□□□ -1.95
UBP11YKR098C RPC82P32349 654 aa2.85□□□□□ -1.95
UBP11YKR098C ECM21P38167 1117 aaKnown RBP2.85□□□□□ -1.95
UBP11YKR098C AKR1P39010 764 aa2.85□□□□□ -1.95
UBP11YKR098C OYE3P41816 400 aaPredicted RBP2.85□□□□□ -1.95
UBP11YKR098C PEX14P53112 341 aa2.85□□□□□ -1.95
UBP11YKR098C TGL2P54857 326 aa2.85□□□□□ -1.95
UBP11YKR098C NHX1Q04121 633 aa2.85□□□□□ -1.95
UBP11YKR098C RSB1Q08417 382 aa2.85□□□□□ -1.95
UBP11YKR098C THI72Q08579 599 aa2.85□□□□□ -1.95
UBP11YKR098C TRE2Q08693 809 aa2.85□□□□□ -1.95
UBP11YKR098C YOR378WQ08902 515 aa2.85□□□□□ -1.95
UBP11YKR098C YTM1Q12024 460 aaPredicted RBP2.85□□□□□ -1.95
UBP11YKR098C SLX4Q12098 748 aa2.85□□□□□ -1.95
UBP11YKR098C TMA7Q3E764 64 aaKnown RBP2.85□□□□□ -1.95
UBP11YKR098C DAL7P21826 554 aa2.84□□□□□ -1.95
UBP11YKR098C YCL002CP25565 263 aa2.84□□□□□ -1.95
UBP11YKR098C PLC1P32383 869 aa2.84□□□□□ -1.95
UBP11YKR098C PEX7P39108 375 aa2.84□□□□□ -1.95
UBP11YKR098C OAF1P39720 1047 aaPredicted RBP2.84□□□□□ -1.95
UBP11YKR098C NOG2P53742 486 aaKnown RBP2.84□□□□□ -1.95
UBP11YKR098C RCM1P53972 490 aa2.84□□□□□ -1.95
UBP11YKR098C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms