RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeast

Gene YPT52, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT52	YKR014C	RAD4	P14736	754 aa		4.96	□□□□□ -1.62
YPT52	YKR014C	CDC48	P25694	835 aa	Known RBP	4.96	□□□□□ -1.62
YPT52	YKR014C	CDC20	P26309	610 aa		4.96	□□□□□ -1.62
YPT52	YKR014C	SIT1	P39980	628 aa		4.96	□□□□□ -1.62
YPT52	YKR014C	ALR2	P43553	858 aa		4.96	□□□□□ -1.62
YPT52	YKR014C	TPO1	Q07824	586 aa		4.96	□□□□□ -1.62
YPT52	YKR014C	FMP25	Q08023	583 aa		4.96	□□□□□ -1.62
YPT52	YKR014C	EMC1	P25574	760 aa		4.95	□□□□□ -1.62
YPT52	YKR014C	ARE1	P25628	610 aa		4.95	□□□□□ -1.62
YPT52	YKR014C	ATG19	P35193	415 aa		4.95	□□□□□ -1.62
YPT52	YKR014C	FLR1	P38124	548 aa		4.95	□□□□□ -1.62
YPT52	YKR014C	TAT2	P38967	592 aa		4.95	□□□□□ -1.62
YPT52	YKR014C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
YPT52	YKR014C	MET12	P46151	657 aa		4.95	□□□□□ -1.62
YPT52	YKR014C	TIM54	P47045	478 aa		4.95	□□□□□ -1.62
YPT52	YKR014C	CCM1	P48237	864 aa	Predicted RBP	4.95	□□□□□ -1.62
YPT52	YKR014C	GCV2	P49095	1034 aa		4.95	□□□□□ -1.62
YPT52	YKR014C	UTP8	P53276	713 aa	Known RBP	4.95	□□□□□ -1.62
YPT52	YKR014C	VPS62	P53285	467 aa		4.95	□□□□□ -1.62
YPT52	YKR014C	VPS30	Q02948	557 aa		4.95	□□□□□ -1.62
YPT52	YKR014C	CLU1	Q03690	1277 aa	Known RBP	4.95	□□□□□ -1.62
YPT52	YKR014C	NOP12	Q08208	459 aa	Known RBP	4.95	□□□□□ -1.62
YPT52	YKR014C	HSP60	P19882	572 aa	Known RBP	4.94	□□□□□ -1.62
YPT52	YKR014C	YCR015C	P25616	317 aa		4.94	□□□□□ -1.62
YPT52	YKR014C	RPL8B	P29453	256 aa	Known RBP	4.94	□□□□□ -1.62
YPT52	YKR014C	SRP101	P32916	621 aa		4.94	□□□□□ -1.62
YPT52	YKR014C	GIP4	P39732	760 aa		4.94	□□□□□ -1.62
YPT52	YKR014C	PFD1	P46988	109 aa		4.94	□□□□□ -1.62
YPT52	YKR014C	LCD1	Q04377	747 aa		4.94	□□□□□ -1.62
YPT52	YKR014C	HMI1	Q12039	706 aa		4.94	□□□□□ -1.62
YPT52	YKR014C	HIS5	P07172	385 aa		4.93	□□□□□ -1.62
YPT52	YKR014C	HUL4	P40985	892 aa		4.93	□□□□□ -1.62
YPT52	YKR014C	YGR125W	P53273	1036 aa		4.93	□□□□□ -1.62
YPT52	YKR014C	SFB2	P53953	876 aa		4.93	□□□□□ -1.62
YPT52	YKR014C	YAP6	Q03935	383 aa		4.93	□□□□□ -1.62
YPT52	YKR014C	CDA1	Q06702	301 aa		4.93	□□□□□ -1.62
YPT52	YKR014C	SPE1	P08432	466 aa		4.92	□□□□□ -1.62
YPT52	YKR014C	CDC6	P09119	513 aa		4.92	□□□□□ -1.62
YPT52	YKR014C	STE11	P23561	717 aa		4.92	□□□□□ -1.62
YPT52	YKR014C	TSL1	P38427	1098 aa	Known RBP	4.92	□□□□□ -1.62
YPT52	YKR014C	MNN10	P50108	393 aa	Known RBP	4.92	□□□□□ -1.62
YPT52	YKR014C	YLR224W	Q05947	369 aa		4.92	□□□□□ -1.62
YPT52	YKR014C	ADY3	Q07732	790 aa		4.92	□□□□□ -1.62
YPT52	YKR014C	RFA1	P22336	621 aa	Known RBP	4.91	□□□□□ -1.62
YPT52	YKR014C	REC104	P33323	182 aa		4.91	□□□□□ -1.62
YPT52	YKR014C	IOC3	P43596	787 aa		4.91	□□□□□ -1.62
YPT52	YKR014C	TAF1	P46677	1066 aa		4.91	□□□□□ -1.62
YPT52	YKR014C	RAI1	P53063	387 aa	Known RBP	4.91	□□□□□ -1.62
YPT52	YKR014C	URN1	Q06525	465 aa	Known RBP	4.91	□□□□□ -1.62
YPT52	YKR014C	UBX5	Q06682	500 aa		4.91	□□□□□ -1.62
YPT52	YKR014C	YDL124W	Q07551	312 aa	Known RBP	4.91	□□□□□ -1.62
YPT52	YKR014C	YPR071W	Q12346	211 aa		4.91	□□□□□ -1.62
YPT52	YKR014C	CIT1	P00890	479 aa		4.9	□□□□□ -1.63
YPT52	YKR014C	NOT3	P06102	836 aa	Known RBP	4.9	□□□□□ -1.63
YPT52	YKR014C	HBS1	P32769	611 aa	Known RBP	4.9	□□□□□ -1.63
YPT52	YKR014C	SHM2	P37291	469 aa	Known RBP	4.9	□□□□□ -1.63
YPT52	YKR014C	YBR284W	P38150	797 aa		4.9	□□□□□ -1.63
YPT52	YKR014C	NPP2	P39997	493 aa		4.9	□□□□□ -1.63
YPT52	YKR014C	MCM6	P53091	1017 aa	Known RBP	4.9	□□□□□ -1.63
YPT52	YKR014C	TMA10	Q06177	86 aa		4.9	□□□□□ -1.63
YPT52	YKR014C	YOR131C	Q12486	218 aa		4.9	□□□□□ -1.63
YPT52	YKR014C	NPP1	P25353	742 aa		4.89	□□□□□ -1.63
YPT52	YKR014C	YBR238C	P38330	731 aa	Known RBP	4.89	□□□□□ -1.63
YPT52	YKR014C	GGA2	P38817	585 aa	Known RBP	4.89	□□□□□ -1.63
YPT52	YKR014C	PLB1	P39105	664 aa		4.89	□□□□□ -1.63
YPT52	YKR014C	CHA4	P43634	648 aa		4.89	□□□□□ -1.63
YPT52	YKR014C	FLC1	Q08967	793 aa		4.89	□□□□□ -1.63
YPT52	YKR014C	CDC53	Q12018	815 aa	Known RBP	4.89	□□□□□ -1.63
YPT52	YKR014C	HBN1	Q96VH4	193 aa		4.89	□□□□□ -1.63
YPT52	YKR014C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
YPT52	YKR014C	CTS1	P29029	562 aa		4.88	□□□□□ -1.63
YPT52	YKR014C	LST4	P34239	828 aa		4.88	□□□□□ -1.63
YPT52	YKR014C	NIT3	P49954	291 aa		4.88	□□□□□ -1.63
YPT52	YKR014C	YKE2	P52553	114 aa		4.88	□□□□□ -1.63
YPT52	YKR014C	HUL5	P53119	910 aa		4.88	□□□□□ -1.63
YPT52	YKR014C	PET10	P36139	283 aa		4.87	□□□□□ -1.63
YPT52	YKR014C	TOK1	P40310	691 aa		4.87	□□□□□ -1.63
YPT52	YKR014C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
YPT52	YKR014C	YOL098C	Q12496	1037 aa		4.87	□□□□□ -1.63
YPT52	YKR014C	RPS9A	O13516	197 aa	Known RBP	4.86	□□□□□ -1.63
YPT52	YKR014C	TOM70	P07213	617 aa	Known RBP	4.86	□□□□□ -1.63
YPT52	YKR014C	GAL11	P19659	1081 aa		4.86	□□□□□ -1.63
YPT52	YKR014C	HCM1	P25364	564 aa		4.86	□□□□□ -1.63
YPT52	YKR014C	SED4	P25365	1065 aa		4.86	□□□□□ -1.63
YPT52	YKR014C	SRP40	P32583	406 aa	Predicted RBP	4.86	□□□□□ -1.63
YPT52	YKR014C	AFR1	P33304	620 aa		4.86	□□□□□ -1.63
YPT52	YKR014C	STE13	P33894	931 aa		4.86	□□□□□ -1.63
YPT52	YKR014C	URM1	P40554	99 aa	Predicted RBP	4.86	□□□□□ -1.63
YPT52	YKR014C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
YPT52	YKR014C	NSE3	Q05541	303 aa		4.86	□□□□□ -1.63
YPT52	YKR014C	BDF2	Q07442	638 aa		4.86	□□□□□ -1.63
YPT52	YKR014C	TUB2	P02557	457 aa	Known RBP	4.85	□□□□□ -1.63
YPT52	YKR014C	MPH2	P0CD99	609 aa		4.85	□□□□□ -1.63
YPT52	YKR014C	MSD1	P15179	658 aa	Known RBP	4.85	□□□□□ -1.63
YPT52	YKR014C	TYE7	P33122	291 aa	Predicted RBP	4.85	□□□□□ -1.63
YPT52	YKR014C	CEP3	P40969	608 aa		4.85	□□□□□ -1.63
YPT52	YKR014C	GSF2	Q04697	403 aa	Known RBP	4.85	□□□□□ -1.63
YPT52	YKR014C	YHR020W	P38708	688 aa	Known RBP	4.84	□□□□□ -1.63
YPT52	YKR014C	RSP5	P39940	809 aa	Known RBP	4.84	□□□□□ -1.63
YPT52	YKR014C	UBP6	P43593	499 aa	Known RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms