RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	YPR196W	Q06595	470 aa		5.94	□□□□□ -1.46
EBP2	YKL172W	RPP2A	P05319	106 aa	Known RBP	5.93	□□□□□ -1.46
EBP2	YKL172W	CIT2	P08679	460 aa		5.93	□□□□□ -1.46
EBP2	YKL172W	CMP2	P14747	604 aa		5.93	□□□□□ -1.46
EBP2	YKL172W	MSD1	P15179	658 aa	Known RBP	5.93	□□□□□ -1.46
EBP2	YKL172W	TIM23	P32897	222 aa		5.93	□□□□□ -1.46
EBP2	YKL172W	AFR1	P33304	620 aa		5.93	□□□□□ -1.46
EBP2	YKL172W	ECM21	P38167	1117 aa	Known RBP	5.93	□□□□□ -1.46
EBP2	YKL172W	UBP6	P43593	499 aa	Known RBP	5.93	□□□□□ -1.46
EBP2	YKL172W	BUL2	Q03758	920 aa	Known RBP	5.93	□□□□□ -1.46
EBP2	YKL172W	SGD1	Q06132	899 aa		5.93	□□□□□ -1.46
EBP2	YKL172W	YDL177C	Q12257	170 aa		5.93	□□□□□ -1.46
EBP2	YKL172W	YPR071W	Q12346	211 aa		5.93	□□□□□ -1.46
EBP2	YKL172W	GLT1	Q12680	2145 aa	Known RBP	5.92	□□□□□ -1.46
EBP2	YKL172W	PHO8	P11491	566 aa		5.92	□□□□□ -1.46
EBP2	YKL172W	NPP1	P25353	742 aa		5.92	□□□□□ -1.46
EBP2	YKL172W	LRG1	P35688	1017 aa		5.92	□□□□□ -1.46
EBP2	YKL172W	RRP14	P36080	434 aa	Known RBP	5.92	□□□□□ -1.46
EBP2	YKL172W	BET3	P36149	193 aa		5.92	□□□□□ -1.46
EBP2	YKL172W	TOK1	P40310	691 aa		5.92	□□□□□ -1.46
EBP2	YKL172W	PRP43	P53131	767 aa	Known RBP	5.92	□□□□□ -1.46
EBP2	YKL172W	PBP1	P53297	722 aa	Known RBP	5.92	□□□□□ -1.46
EBP2	YKL172W	MRPL22	P53881	309 aa		5.92	□□□□□ -1.46
EBP2	YKL172W	TOP3	P13099	656 aa		5.91	□□□□□ -1.46
EBP2	YKL172W	PPG1	P32838	368 aa		5.91	□□□□□ -1.46
EBP2	YKL172W	PSP2	P50109	593 aa	Known RBP	5.91	□□□□□ -1.46
EBP2	YKL172W	YKE2	P52553	114 aa		5.91	□□□□□ -1.46
EBP2	YKL172W	RTA1	P53047	317 aa		5.91	□□□□□ -1.46
EBP2	YKL172W	XYL2	Q07993	356 aa		5.91	□□□□□ -1.46
EBP2	YKL172W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.91	□□□□□ -1.46	not detected
EBP2	YKL172W	HSF1	P10961	833 aa		5.9	□□□□□ -1.46
EBP2	YKL172W	NPP2	P39997	493 aa		5.9	□□□□□ -1.46
EBP2	YKL172W	ZRG8	P40021	1076 aa		5.9	□□□□□ -1.46
EBP2	YKL172W	NIT1	P40447	199 aa		5.9	□□□□□ -1.46
EBP2	YKL172W	NIT3	P49954	291 aa		5.9	□□□□□ -1.46
EBP2	YKL172W	YGR012W	P53206	393 aa		5.9	□□□□□ -1.46
EBP2	YKL172W	RNH70	P53331	553 aa		5.9	□□□□□ -1.46
EBP2	YKL172W	POB3	Q04636	552 aa	Known RBP	5.9	□□□□□ -1.46
EBP2	YKL172W	GAL10	P04397	699 aa		5.89	□□□□□ -1.47
EBP2	YKL172W	ENA1	P13587	1091 aa		5.89	□□□□□ -1.47
EBP2	YKL172W	SFB2	P53953	876 aa		5.89	□□□□□ -1.47
EBP2	YKL172W	ENA2	Q01896	1091 aa		5.89	□□□□□ -1.47
EBP2	YKL172W	VPS30	Q02948	557 aa		5.89	□□□□□ -1.47
EBP2	YKL172W	ENA5	Q12691	1091 aa		5.89	□□□□□ -1.47
EBP2	YKL172W	MET6	P05694	767 aa	Known RBP	5.88	□□□□□ -1.47
EBP2	YKL172W	ERR1	P0CX10	437 aa		5.88	□□□□□ -1.47
EBP2	YKL172W	ERR2	P0CX11	437 aa		5.88	□□□□□ -1.47
EBP2	YKL172W	SRM1	P21827	482 aa		5.88	□□□□□ -1.47
EBP2	YKL172W	SEG2	P34250	1132 aa		5.88	□□□□□ -1.47
EBP2	YKL172W	ATG19	P35193	415 aa		5.88	□□□□□ -1.47
EBP2	YKL172W	LAM1	P38851	1228 aa		5.88	□□□□□ -1.47
EBP2	YKL172W	MND2	P40577	368 aa		5.88	□□□□□ -1.47
EBP2	YKL172W	ALG2	P43636	503 aa		5.88	□□□□□ -1.47
EBP2	YKL172W	MPH2	P0CD99	609 aa		5.87	□□□□□ -1.47
EBP2	YKL172W	GAS1	P22146	559 aa	Known RBP	5.87	□□□□□ -1.47
EBP2	YKL172W	RFA1	P22336	621 aa	Known RBP	5.87	□□□□□ -1.47
EBP2	YKL172W	THI4	P32318	326 aa		5.87	□□□□□ -1.47
EBP2	YKL172W	SRP101	P32916	621 aa		5.87	□□□□□ -1.47
EBP2	YKL172W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
EBP2	YKL172W	HSV2	P50079	448 aa	Predicted RBP	5.87	□□□□□ -1.47
EBP2	YKL172W	RAI1	P53063	387 aa	Known RBP	5.87	□□□□□ -1.47
EBP2	YKL172W	DAM1	P53267	343 aa		5.87	□□□□□ -1.47
EBP2	YKL172W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
EBP2	YKL172W	ALG12	P53730	551 aa		5.87	□□□□□ -1.47
EBP2	YKL172W	CDA1	Q06702	301 aa		5.87	□□□□□ -1.47
EBP2	YKL172W	ELM1	P32801	640 aa		5.86	□□□□□ -1.47
EBP2	YKL172W	TSA1	P34760	196 aa	Known RBP	5.86	□□□□□ -1.47
EBP2	YKL172W	EMC3	P36039	253 aa		5.86	□□□□□ -1.47
EBP2	YKL172W	ERT1	P38140	529 aa		5.86	□□□□□ -1.47
EBP2	YKL172W	POA1	P38218	177 aa		5.86	□□□□□ -1.47
EBP2	YKL172W	GDH3	P39708	457 aa		5.86	□□□□□ -1.47
EBP2	YKL172W	SOD2	P00447	233 aa		5.85	□□□□□ -1.47
EBP2	YKL172W	NOT3	P06102	836 aa	Known RBP	5.85	□□□□□ -1.47
EBP2	YKL172W	MEF2	P39677	819 aa		5.85	□□□□□ -1.47
EBP2	YKL172W	GCN5	Q03330	439 aa		5.85	□□□□□ -1.47
EBP2	YKL172W	ROT1	Q03691	256 aa		5.85	□□□□□ -1.47
EBP2	YKL172W	CDA2	Q06703	312 aa		5.85	□□□□□ -1.47
EBP2	YKL172W	RXT3	Q07458	294 aa		5.85	□□□□□ -1.47
EBP2	YKL172W	ENV7	Q12003	364 aa		5.85	□□□□□ -1.47
EBP2	YKL172W	RPS13	P05756	151 aa	Known RBP	5.84	□□□□□ -1.47
EBP2	YKL172W	SPE1	P08432	466 aa		5.84	□□□□□ -1.47
EBP2	YKL172W	AVT1	P47082	602 aa		5.84	□□□□□ -1.47
EBP2	YKL172W	RIM8	P53179	542 aa		5.84	□□□□□ -1.47
EBP2	YKL172W	UGO1	Q03327	502 aa		5.84	□□□□□ -1.47
EBP2	YKL172W	YDR132C	Q03900	495 aa		5.84	□□□□□ -1.47
EBP2	YKL172W	REH1	Q06709	432 aa		5.84	□□□□□ -1.47
EBP2	YKL172W	GPB1	Q08886	897 aa		5.84	□□□□□ -1.47
EBP2	YKL172W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
EBP2	YKL172W	GSY1	P23337	708 aa		5.83	□□□□□ -1.48
EBP2	YKL172W	MSH2	P25847	964 aa		5.83	□□□□□ -1.48
EBP2	YKL172W	URA1	P28272	314 aa	Predicted RBP	5.83	□□□□□ -1.48
EBP2	YKL172W	STE13	P33894	931 aa		5.83	□□□□□ -1.48
EBP2	YKL172W	YGR283C	P53336	341 aa	Predicted RBP	5.83	□□□□□ -1.48
EBP2	YKL172W	NOG2	P53742	486 aa	Known RBP	5.83	□□□□□ -1.48
EBP2	YKL172W	PLB2	Q03674	706 aa		5.83	□□□□□ -1.48
EBP2	YKL172W	UTP14	Q04500	899 aa	Known RBP	5.83	□□□□□ -1.48
EBP2	YKL172W	ADY3	Q07732	790 aa		5.83	□□□□□ -1.48
EBP2	YKL172W	TPO1	Q07824	586 aa		5.83	□□□□□ -1.48
EBP2	YKL172W	RPS9A	O13516	197 aa	Known RBP	5.82	□□□□□ -1.48
EBP2	YKL172W	PRP6	P19735	899 aa	Predicted RBP	5.82	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 44 ms