RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C STO1P34160 861 aaKnown RBP6.85□□□□□ -1.31
YIR043CYIR043C WHI3P34761 661 aaKnown RBP6.85□□□□□ -1.31
YIR043CYIR043C YKR078WP36158 585 aaKnown RBP6.85□□□□□ -1.31
YIR043CYIR043C GIC1P38785 314 aa6.85□□□□□ -1.31
YIR043CYIR043C NPP2P39997 493 aa6.85□□□□□ -1.31
YIR043CYIR043C MGS1P40151 587 aa6.85□□□□□ -1.31
YIR043CYIR043C MMM1P41800 426 aa6.85□□□□□ -1.31
YIR043CYIR043C YJR120WP47157 116 aa6.85□□□□□ -1.31
YIR043CYIR043C MTC3P53077 123 aa6.85□□□□□ -1.31
YIR043CYIR043C MET13P53128 600 aa6.85□□□□□ -1.31
YIR043CYIR043C SRT1Q03175 343 aa6.85□□□□□ -1.31
YIR043CYIR043C RSC3Q06639 885 aa6.85□□□□□ -1.31
YIR043CYIR043C TOP1P04786 769 aa6.84□□□□□ -1.31
YIR043CYIR043C SFL1P20134 766 aa6.84□□□□□ -1.31
YIR043CYIR043C PER1P25625 357 aa6.84□□□□□ -1.31
YIR043CYIR043C PCL2P25693 308 aa6.84□□□□□ -1.31
YIR043CYIR043C YEL1P34225 687 aa6.84□□□□□ -1.31
YIR043CYIR043C MTC2P34246 357 aa6.84□□□□□ -1.31
YIR043CYIR043C AKR1P39010 764 aa6.84□□□□□ -1.31
YIR043CYIR043C NUG1P40010 520 aaKnown RBP6.84□□□□□ -1.31
YIR043CYIR043C PRY1P47032 299 aa6.84□□□□□ -1.31
YIR043CYIR043C SFB2P53953 876 aa6.84□□□□□ -1.31
YIR043CYIR043C TDA6Q06466 467 aa6.84□□□□□ -1.31
YIR043CYIR043C SAM35P14693 329 aa6.83□□□□□ -1.32
YIR043CYIR043C SRO9P25567 434 aaKnown RBP6.83□□□□□ -1.32
YIR043CYIR043C TRK2P28584 889 aa6.83□□□□□ -1.32
YIR043CYIR043C MCX1P38323 520 aaPredicted RBP6.83□□□□□ -1.32
YIR043CYIR043C CAF16P43569 289 aa6.83□□□□□ -1.32
YIR043CYIR043C TY4A-JP47023 414 aa6.83□□□□□ -1.32
YIR043CYIR043C ARI1P53111 347 aaKnown RBP6.83□□□□□ -1.32
YIR043CYIR043C ATP25Q03153 612 aa6.83□□□□□ -1.32
YIR043CYIR043C HFD1Q04458 532 aa6.83□□□□□ -1.32
YIR043CYIR043C NBA1Q08229 501 aaKnown RBP6.83□□□□□ -1.32
YIR043CYIR043C FUN30P31380 1131 aa6.82□□□□□ -1.32
YIR043CYIR043C MDL2P33311 773 aa6.82□□□□□ -1.32
YIR043CYIR043C RRT14P40470 206 aa6.82□□□□□ -1.32
YIR043CYIR043C RSC58Q07979 502 aa6.82□□□□□ -1.32
YIR043CYIR043C OSW2Q12202 724 aa6.82□□□□□ -1.32
YIR043CYIR043C MPH2P0CD99 609 aa6.81□□□□□ -1.32
YIR043CYIR043C ACE2P21192 770 aa6.81□□□□□ -1.32
YIR043CYIR043C TPM2P40414 161 aa6.81□□□□□ -1.32
YIR043CYIR043C NIT1P40447 199 aa6.81□□□□□ -1.32
YIR043CYIR043C NOP2P40991 618 aaKnown RBP6.81□□□□□ -1.32
YIR043CYIR043C CIT3P43635 486 aa6.81□□□□□ -1.32
YIR043CYIR043C MTQ2Q03920 221 aaPredicted RBP6.81□□□□□ -1.32
YIR043CYIR043C REH1Q06709 432 aa6.81□□□□□ -1.32
YIR043CYIR043C GUD1Q07729 489 aa6.81□□□□□ -1.32
YIR043CYIR043C SVS1Q12254 260 aa6.81□□□□□ -1.32
YIR043CYIR043C RFA1P22336 621 aaKnown RBP6.8□□□□□ -1.32
YIR043CYIR043C PRP19P32523 503 aaKnown RBP6.8□□□□□ -1.32
YIR043CYIR043C MCD4P36051 919 aa6.8□□□□□ -1.32
YIR043CYIR043C GPP1P41277 250 aaKnown RBP6.8□□□□□ -1.32
YIR043CYIR043C YJR096WP47137 282 aa6.8□□□□□ -1.32
YIR043CYIR043C HFM1P51979 1187 aa6.8□□□□□ -1.32
YIR043CYIR043C YKE2P52553 114 aa6.8□□□□□ -1.32
YIR043CYIR043C RCM1P53972 490 aa6.8□□□□□ -1.32
YIR043CYIR043C SDH1Q00711 640 aa6.8□□□□□ -1.32
YIR043CYIR043C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
YIR043CYIR043C YFL066CP43538 392 aa6.79□□□□□ -1.32
YIR043CYIR043C AIM14P53109 570 aa6.79□□□□□ -1.32
YIR043CYIR043C PEX8P53248 589 aa6.79□□□□□ -1.32
YIR043CYIR043C SNP1Q00916 300 aaPredicted RBP6.79□□□□□ -1.32
YIR043CYIR043C YOR059CQ08448 450 aaKnown RBP6.79□□□□□ -1.32
YIR043CYIR043C DAL7P21826 554 aa6.78□□□□□ -1.32
YIR043CYIR043C EUG1P32474 517 aa6.78□□□□□ -1.32
YIR043CYIR043C HOG1P32485 435 aa6.78□□□□□ -1.32
YIR043CYIR043C AIM26P32858 118 aa6.78□□□□□ -1.32
YIR043CYIR043C ENP1P38333 483 aaKnown RBP6.78□□□□□ -1.32
YIR043CYIR043C PCM1P38628 557 aaKnown RBP6.78□□□□□ -1.32
YIR043CYIR043C SLN1P39928 1220 aaPredicted RBP6.78□□□□□ -1.32
YIR043CYIR043C NSG2P53898 299 aa6.78□□□□□ -1.32
YIR043CYIR043C COG8Q04632 607 aa6.78□□□□□ -1.32
YIR043CYIR043C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
YIR043CYIR043C GIN4Q12263 1142 aa6.78□□□□□ -1.32
YIR043CYIR043C RPN10P38886 268 aaKnown RBP6.77□□□□□ -1.33
YIR043CYIR043C ALY2P47029 1046 aa6.77□□□□□ -1.33
YIR043CYIR043C TAD1P53065 400 aa6.77□□□□□ -1.33
YIR043CYIR043C ATG33Q06485 197 aa6.77□□□□□ -1.33
YIR043CYIR043C XYL2Q07993 356 aa6.77□□□□□ -1.33
YIR043CYIR043C TRE2Q08693 809 aa6.77□□□□□ -1.33
YIR043CYIR043C TRE1Q08919 783 aa6.77□□□□□ -1.33
YIR043CYIR043C YDR215CQ12240 137 aa6.77□□□□□ -1.33
YIR043CYIR043C HMG1P12683 1054 aa6.76□□□□□ -1.33
YIR043CYIR043C YBR071WP38243 211 aa6.76□□□□□ -1.33
YIR043CYIR043C PTC7P38797 343 aa6.76□□□□□ -1.33
YIR043CYIR043C CKB2P38930 258 aa6.76□□□□□ -1.33
YIR043CYIR043C PEX7P39108 375 aa6.76□□□□□ -1.33
YIR043CYIR043C GTS1P40956 396 aa6.76□□□□□ -1.33
YIR043CYIR043C NOG2P53742 486 aaKnown RBP6.76□□□□□ -1.33
YIR043CYIR043C GUP2Q08929 609 aa6.76□□□□□ -1.33
YIR043CYIR043C TMA7Q3E764 64 aaKnown RBP6.76□□□□□ -1.33
YIR043CYIR043C NOT3P06102 836 aaKnown RBP6.75□□□□□ -1.33
YIR043CYIR043C YCL002CP25565 263 aa6.75□□□□□ -1.33
YIR043CYIR043C RPC82P32349 654 aa6.75□□□□□ -1.33
YIR043CYIR043C SEC6P32844 805 aa6.75□□□□□ -1.33
YIR043CYIR043C TAT1P38085 619 aa6.75□□□□□ -1.33
YIR043CYIR043C RFC5P38251 354 aa6.75□□□□□ -1.33
YIR043CYIR043C YAP1801P38856 637 aa6.75□□□□□ -1.33
YIR043CYIR043C DOT6P40059 670 aaKnown RBP6.75□□□□□ -1.33
YIR043CYIR043C CEP3P40969 608 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms