RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C EEB1Q02891 456 aa6.7□□□□□ -1.34
NEM1YHR004C EFT1P32324 842 aaKnown RBP6.69□□□□□ -1.34
NEM1YHR004C NCS6P53088 359 aa6.69□□□□□ -1.34
NEM1YHR004C HRQ1Q05549 1077 aa6.69□□□□□ -1.34
NEM1YHR004C RPC82P32349 654 aa6.68□□□□□ -1.34
NEM1YHR004C MNR2P35724 969 aa6.68□□□□□ -1.34
NEM1YHR004C YKL151CP36059 337 aa6.68□□□□□ -1.34
NEM1YHR004C SAH1P39954 449 aaKnown RBP6.68□□□□□ -1.34
NEM1YHR004C SRP1Q02821 542 aaKnown RBP6.68□□□□□ -1.34
NEM1YHR004C KTR4P38131 464 aa6.66□□□□□ -1.34
NEM1YHR004C SUL1P38359 859 aa6.66□□□□□ -1.34
NEM1YHR004C GIC1P38785 314 aa6.66□□□□□ -1.34
NEM1YHR004C YLR225CQ05948 407 aaKnown RBP6.66□□□□□ -1.34
NEM1YHR004C CAD1P24813 409 aaKnown RBP6.65□□□□□ -1.35
NEM1YHR004C KAR4P25583 335 aa6.65□□□□□ -1.35
NEM1YHR004C OYE2Q03558 400 aaKnown RBP6.65□□□□□ -1.35
NEM1YHR004C YOL073CQ08232 322 aa6.64□□□□□ -1.35
NEM1YHR004C STU2P46675 888 aa6.63□□□□□ -1.35
NEM1YHR004C TAF7Q05021 590 aa6.63□□□□□ -1.35
NEM1YHR004C YLR040CQ07988 224 aa6.63□□□□□ -1.35
NEM1YHR004C TIM44Q01852 431 aa6.62□□□□□ -1.35
NEM1YHR004C LAS17Q12446 633 aa6.62□□□□□ -1.35
NEM1YHR004C MCH5Q08777 521 aa6.61□□□□□ -1.35
NEM1YHR004C ERG4P25340 473 aa6.6□□□□□ -1.35
NEM1YHR004C WHI4Q07655 649 aaKnown RBP6.6□□□□□ -1.35
NEM1YHR004C SED4P25365 1065 aa6.59□□□□□ -1.35
NEM1YHR004C YGR053CP53234 283 aa6.59□□□□□ -1.35
NEM1YHR004C YPR196WQ06595 470 aa6.59□□□□□ -1.35
NEM1YHR004C OMS1Q06668 471 aa6.59□□□□□ -1.35
NEM1YHR004C ACF2Q12168 779 aa6.59□□□□□ -1.35
NEM1YHR004C TRP4P07285 380 aaPredicted RBP6.58□□□□□ -1.36
NEM1YHR004C UPC2Q12151 913 aa6.58□□□□□ -1.36
NEM1YHR004C CDC12P32468 407 aaKnown RBP6.57□□□□□ -1.36
NEM1YHR004C BUL1P48524 976 aa6.57□□□□□ -1.36
NEM1YHR004C SFB2P53953 876 aa6.57□□□□□ -1.36
NEM1YHR004C RNT1Q02555 471 aa6.57□□□□□ -1.36
NEM1YHR004C YML020WQ03722 664 aa6.57□□□□□ -1.36
NEM1YHR004C GYP7P48365 746 aa6.55□□□□□ -1.36
NEM1YHR004C RAI1P53063 387 aaKnown RBP6.55□□□□□ -1.36
NEM1YHR004C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
NEM1YHR004C TMN2Q04562 672 aa6.55□□□□□ -1.36
NEM1YHR004C YKR078WP36158 585 aaKnown RBP6.54□□□□□ -1.36
NEM1YHR004C YER158CP40095 573 aa6.54□□□□□ -1.36
NEM1YHR004C QRI1P43123 477 aaKnown RBP6.54□□□□□ -1.36
NEM1YHR004C STB4P50104 949 aa6.54□□□□□ -1.36
NEM1YHR004C DUS3Q06053 668 aaKnown RBP6.54□□□□□ -1.36
NEM1YHR004C SBA1P28707 216 aaKnown RBP6.53□□□□□ -1.36
NEM1YHR004C ABD1P32783 436 aaPredicted RBP6.53□□□□□ -1.36
NEM1YHR004C NPP2P39997 493 aa6.53□□□□□ -1.36
NEM1YHR004C ESC2Q06340 456 aa6.52□□□□□ -1.37
NEM1YHR004C AGP1P25376 633 aa6.51□□□□□ -1.37
NEM1YHR004C VPS30Q02948 557 aa6.51□□□□□ -1.37
NEM1YHR004C GDE1Q02979 1223 aa6.51□□□□□ -1.37
NEM1YHR004C YMR206WQ03695 313 aa6.51□□□□□ -1.37
NEM1YHR004C NOP8Q08287 484 aaPredicted RBP6.51□□□□□ -1.37
NEM1YHR004C PPR1P07272 904 aaPredicted RBP6.5□□□□□ -1.37
NEM1YHR004C NAP1P25293 417 aaKnown RBP6.5□□□□□ -1.37
NEM1YHR004C CDC48P25694 835 aaKnown RBP6.5□□□□□ -1.37
NEM1YHR004C MBP1P39678 833 aa6.5□□□□□ -1.37
NEM1YHR004C FAA4P47912 694 aaKnown RBP6.5□□□□□ -1.37
NEM1YHR004C IRC10Q08118 586 aa6.5□□□□□ -1.37
NEM1YHR004C CLN2P20438 545 aa6.5□□□□□ -1.37
NEM1YHR004C STE14P32584 239 aa6.5□□□□□ -1.37
NEM1YHR004C ATF1P40353 525 aa6.5□□□□□ -1.37
NEM1YHR004C FAL1Q12099 399 aaKnown RBP6.5□□□□□ -1.37
NEM1YHR004C ALG7P07286 448 aa6.49□□□□□ -1.37
NEM1YHR004C NOT3P06102 836 aaKnown RBP6.48□□□□□ -1.37
NEM1YHR004C PPH3P32345 308 aa6.48□□□□□ -1.37
NEM1YHR004C PEX19Q07418 342 aa6.48□□□□□ -1.37
NEM1YHR004C BDF2Q07442 638 aa6.48□□□□□ -1.37
NEM1YHR004C ADE8P04161 214 aa6.47□□□□□ -1.37
NEM1YHR004C TSL1P38427 1098 aaKnown RBP6.47□□□□□ -1.37
NEM1YHR004C GUS1P46655 708 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
NEM1YHR004C CUE2P36075 443 aaKnown RBP6.46□□□□□ -1.38
NEM1YHR004C YDR306CQ06640 478 aa6.46□□□□□ -1.38
NEM1YHR004C STE13P33894 931 aa6.45□□□□□ -1.38
NEM1YHR004C CWC24P53769 259 aa6.45□□□□□ -1.38
NEM1YHR004C SHE9Q04172 456 aa6.45□□□□□ -1.38
NEM1YHR004C HBT1Q07653 1046 aaKnown RBP6.45□□□□□ -1.38
NEM1YHR004C MTH1P35198 433 aa6.44□□□□□ -1.38
NEM1YHR004C YBR238CP38330 731 aaKnown RBP6.44□□□□□ -1.38
NEM1YHR004C YKE2P52553 114 aa6.44□□□□□ -1.38
NEM1YHR004C TPO2P53283 614 aa6.44□□□□□ -1.38
NEM1YHR004C MET3P08536 511 aa6.43□□□□□ -1.38
NEM1YHR004C DAS1P47005 663 aa6.43□□□□□ -1.38
NEM1YHR004C SCT1P32784 759 aa6.42□□□□□ -1.38
NEM1YHR004C SPC42P36094 363 aa6.42□□□□□ -1.38
NEM1YHR004C VBA5P36172 582 aa6.42□□□□□ -1.38
NEM1YHR004C MAD1P40957 749 aa6.42□□□□□ -1.38
NEM1YHR004C SLU7Q02775 382 aaKnown RBP6.42□□□□□ -1.38
NEM1YHR004C MUK1Q02866 612 aa6.42□□□□□ -1.38
NEM1YHR004C VPS16Q03308 798 aa6.42□□□□□ -1.38
NEM1YHR004C DLT1Q04216 342 aa6.42□□□□□ -1.38
NEM1YHR004C SSL1Q04673 461 aaPredicted RBP6.42□□□□□ -1.38
NEM1YHR004C SWM1Q12379 170 aa6.42□□□□□ -1.38
NEM1YHR004C AAR2P32357 355 aaPredicted RBP6.41□□□□□ -1.38
NEM1YHR004C SDP1P40479 209 aa6.41□□□□□ -1.38
NEM1YHR004C GND2P53319 492 aa6.41□□□□□ -1.38
NEM1YHR004C ERG5P54781 538 aa6.41□□□□□ -1.38
NEM1YHR004C LGE1Q02796 332 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 61.9 ms