RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W SRP101P32916 621 aa3.66□□□□□ -1.82
NIC96YFR002W POA1P38218 177 aa3.66□□□□□ -1.82
NIC96YFR002W PBY1P38254 753 aa3.66□□□□□ -1.82
NIC96YFR002W IRR1P40541 1150 aa3.66□□□□□ -1.82
NIC96YFR002W PFD1P46988 109 aa3.66□□□□□ -1.82
NIC96YFR002W YGR012WP53206 393 aa3.66□□□□□ -1.82
NIC96YFR002W ENA2Q01896 1091 aa3.66□□□□□ -1.82
NIC96YFR002W ENA5Q12691 1091 aa3.66□□□□□ -1.82
NIC96YFR002W NPP1P25353 742 aa3.65□□□□□ -1.83
NIC96YFR002W GYP7P48365 746 aa3.65□□□□□ -1.83
NIC96YFR002W YDR306CQ06640 478 aa3.65□□□□□ -1.83
NIC96YFR002W THO2P53552 1597 aaKnown RBP3.65□□□□□ -1.83
NIC96YFR002W STE11P23561 717 aa3.65□□□□□ -1.83
NIC96YFR002W YBR184WP38299 523 aa3.65□□□□□ -1.83
NIC96YFR002W TSL1P38427 1098 aaKnown RBP3.65□□□□□ -1.83
NIC96YFR002W HIS5P07172 385 aa3.64□□□□□ -1.83
NIC96YFR002W CHA4P43634 648 aa3.64□□□□□ -1.83
NIC96YFR002W SPE1P08432 466 aa3.64□□□□□ -1.83
NIC96YFR002W GRX1P25373 110 aaKnown RBP3.64□□□□□ -1.83
NIC96YFR002W HBS1P32769 611 aaKnown RBP3.64□□□□□ -1.83
NIC96YFR002W PLB1P39105 664 aa3.64□□□□□ -1.83
NIC96YFR002W SIT1P39980 628 aa3.64□□□□□ -1.83
NIC96YFR002W HSF1P10961 833 aa3.63□□□□□ -1.83
NIC96YFR002W YER158CP40095 573 aa3.63□□□□□ -1.83
NIC96YFR002W MNN10P50108 393 aaKnown RBP3.63□□□□□ -1.83
NIC96YFR002W YKE2P52553 114 aa3.63□□□□□ -1.83
NIC96YFR002W MCM6P53091 1017 aaKnown RBP3.63□□□□□ -1.83
NIC96YFR002W BUL2Q03758 920 aaKnown RBP3.63□□□□□ -1.83
NIC96YFR002W PPH3P32345 308 aa3.63□□□□□ -1.83
NIC96YFR002W YKR078WP36158 585 aaKnown RBP3.63□□□□□ -1.83
NIC96YFR002W ERT1P38140 529 aa3.63□□□□□ -1.83
NIC96YFR002W FMP25Q08023 583 aa3.63□□□□□ -1.83
NIC96YFR002W RPC82P32349 654 aa3.62□□□□□ -1.83
NIC96YFR002W YBR238CP38330 731 aaKnown RBP3.62□□□□□ -1.83
NIC96YFR002W WRS1Q12109 432 aaKnown RBP3.62□□□□□ -1.83
NIC96YFR002W AAR2P32357 355 aaPredicted RBP3.62□□□□□ -1.83
NIC96YFR002W CCC2P38995 1004 aa3.62□□□□□ -1.83
NIC96YFR002W URM1P40554 99 aaPredicted RBP3.62□□□□□ -1.83
NIC96YFR002W WHI4Q07655 649 aaKnown RBP3.62□□□□□ -1.83
NIC96YFR002W KCS1Q12494 1050 aa3.61□□□□□ -1.83
NIC96YFR002W REV3P14284 1504 aa3.61□□□□□ -1.83
NIC96YFR002W PRP9P19736 530 aaKnown RBP3.61□□□□□ -1.83
NIC96YFR002W CDC48P25694 835 aaKnown RBP3.61□□□□□ -1.83
NIC96YFR002W YRO2P38079 344 aa3.61□□□□□ -1.83
NIC96YFR002W PHO23P50947 330 aa3.61□□□□□ -1.83
NIC96YFR002W NAN1Q02931 896 aaKnown RBP3.61□□□□□ -1.83
NIC96YFR002W YPR196WQ06595 470 aa3.61□□□□□ -1.83
NIC96YFR002W PMA1P05030 918 aaKnown RBP3.6□□□□□ -1.83
NIC96YFR002W HCM1P25364 564 aa3.6□□□□□ -1.83
NIC96YFR002W RPL8BP29453 256 aaKnown RBP3.6□□□□□ -1.83
NIC96YFR002W DCG1P32460 244 aa3.6□□□□□ -1.83
NIC96YFR002W PSP2P50109 593 aaKnown RBP3.6□□□□□ -1.83
NIC96YFR002W EXG2P52911 562 aa3.6□□□□□ -1.83
NIC96YFR002W NCS6P53088 359 aa3.6□□□□□ -1.83
NIC96YFR002W NOP7P53261 605 aaKnown RBP3.6□□□□□ -1.83
NIC96YFR002W UTP8P53276 713 aaKnown RBP3.6□□□□□ -1.83
NIC96YFR002W NTO1Q12311 748 aa3.6□□□□□ -1.83
NIC96YFR002W ADE8P04161 214 aa3.6□□□□□ -1.83
NIC96YFR002W ALR2P43553 858 aa3.6□□□□□ -1.83
NIC96YFR002W RAI1P53063 387 aaKnown RBP3.6□□□□□ -1.83
NIC96YFR002W TUB2P02557 457 aaKnown RBP3.59□□□□□ -1.83
NIC96YFR002W RPP2AP05319 106 aaKnown RBP3.59□□□□□ -1.83
NIC96YFR002W TOK1P40310 691 aa3.59□□□□□ -1.83
NIC96YFR002W UBX5Q06682 500 aa3.59□□□□□ -1.83
NIC96YFR002W NPC2Q12408 173 aa3.59□□□□□ -1.83
NIC96YFR002W RAD4P14736 754 aa3.59□□□□□ -1.84
NIC96YFR002W TPO2P53283 614 aa3.59□□□□□ -1.84
NIC96YFR002W GSF2Q04697 403 aaKnown RBP3.59□□□□□ -1.84
NIC96YFR002W LAS17Q12446 633 aa3.59□□□□□ -1.84
NIC96YFR002W NOT3P06102 836 aaKnown RBP3.58□□□□□ -1.84
NIC96YFR002W TRM2P33753 639 aa3.58□□□□□ -1.84
NIC96YFR002W ATG19P35193 415 aa3.58□□□□□ -1.84
NIC96YFR002W YBR284WP38150 797 aa3.58□□□□□ -1.84
NIC96YFR002W UPC2Q12151 913 aa3.58□□□□□ -1.84
NIC96YFR002W STE14P32584 239 aa3.58□□□□□ -1.84
NIC96YFR002W LCD1Q04377 747 aa3.58□□□□□ -1.84
NIC96YFR002W EAF1Q06337 982 aa3.58□□□□□ -1.84
NIC96YFR002W YPR071WQ12346 211 aa3.58□□□□□ -1.84
NIC96YFR002W HBN1Q96VH4 193 aa3.58□□□□□ -1.84
NIC96YFR002W STE13P33894 931 aa3.57□□□□□ -1.84
NIC96YFR002W CCM1P48237 864 aaPredicted RBP3.57□□□□□ -1.84
NIC96YFR002W ERP6P53198 216 aa3.57□□□□□ -1.84
NIC96YFR002W SSL1Q04673 461 aaPredicted RBP3.57□□□□□ -1.84
NIC96YFR002W SPO75Q07798 868 aa3.57□□□□□ -1.84
NIC96YFR002W PUS9Q12069 462 aa3.57□□□□□ -1.84
NIC96YFR002W PMI40P29952 429 aaKnown RBP3.56□□□□□ -1.84
NIC96YFR002W DEF1P35732 738 aaKnown RBP3.56□□□□□ -1.84
NIC96YFR002W YHR020WP38708 688 aaKnown RBP3.56□□□□□ -1.84
NIC96YFR002W FBP1P09201 348 aa3.56□□□□□ -1.84
NIC96YFR002W TOP3P13099 656 aa3.56□□□□□ -1.84
NIC96YFR002W MSD1P15179 658 aaKnown RBP3.56□□□□□ -1.84
NIC96YFR002W PET10P36139 283 aa3.56□□□□□ -1.84
NIC96YFR002W SUN4P53616 420 aa3.56□□□□□ -1.84
NIC96YFR002W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
NIC96YFR002W KAR4P25583 335 aa3.55□□□□□ -1.84
NIC96YFR002W ARE1P25628 610 aa3.55□□□□□ -1.84
NIC96YFR002W CDC11P32458 415 aa3.55□□□□□ -1.84
NIC96YFR002W RPD3P32561 433 aa3.55□□□□□ -1.84
NIC96YFR002W REC104P33323 182 aa3.55□□□□□ -1.84
NIC96YFR002W IOC3P43596 787 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms