RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C PDC6P26263 563 aaKnown RBP6.67□□□□□ -1.34
VPS72YDR485C AAR2P32357 355 aaPredicted RBP6.67□□□□□ -1.34
VPS72YDR485C NEM1P38757 446 aa6.67□□□□□ -1.34
VPS72YDR485C IML2P47031 731 aa6.67□□□□□ -1.34
VPS72YDR485C UTP5Q04177 643 aaKnown RBP6.67□□□□□ -1.34
VPS72YDR485C BRE4Q07660 1125 aa6.67□□□□□ -1.34
VPS72YDR485C YOL114CQ12322 202 aa6.67□□□□□ -1.34
VPS72YDR485C LEU1P07264 779 aaKnown RBP6.67□□□□□ -1.34
VPS72YDR485C HXT6P39003 570 aaKnown RBP6.67□□□□□ -1.34
VPS72YDR485C HXT7P39004 570 aa6.67□□□□□ -1.34
VPS72YDR485C YGR283CP53336 341 aaPredicted RBP6.67□□□□□ -1.34
VPS72YDR485C SEC18P18759 758 aaKnown RBP6.66□□□□□ -1.34
VPS72YDR485C SAN1P22470 610 aa6.66□□□□□ -1.34
VPS72YDR485C SPT23P35210 1082 aa6.66□□□□□ -1.34
VPS72YDR485C SGM1P47166 707 aa6.66□□□□□ -1.34
VPS72YDR485C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
VPS72YDR485C SDH2P21801 266 aa6.66□□□□□ -1.34
VPS72YDR485C BCD1P38772 366 aa6.66□□□□□ -1.34
VPS72YDR485C TAD1P53065 400 aa6.66□□□□□ -1.34
VPS72YDR485C YLR352WQ06479 807 aa6.66□□□□□ -1.34
VPS72YDR485C BI4P03879 638 aa6.65□□□□□ -1.34
VPS72YDR485C MLS1P30952 554 aa6.65□□□□□ -1.34
VPS72YDR485C HOG1P32485 435 aa6.65□□□□□ -1.34
VPS72YDR485C ADD66P36040 267 aa6.65□□□□□ -1.34
VPS72YDR485C NOP4P37838 685 aaKnown RBP6.65□□□□□ -1.34
VPS72YDR485C TOK1P40310 691 aa6.65□□□□□ -1.34
VPS72YDR485C YTA6P40328 754 aa6.65□□□□□ -1.34
VPS72YDR485C FUS1P11710 512 aa6.65□□□□□ -1.35
VPS72YDR485C DBP2P24783 546 aaKnown RBP6.65□□□□□ -1.35
VPS72YDR485C NPP1P25353 742 aa6.65□□□□□ -1.35
VPS72YDR485C STO1P34160 861 aaKnown RBP6.65□□□□□ -1.35
VPS72YDR485C YBR238CP38330 731 aaKnown RBP6.65□□□□□ -1.35
VPS72YDR485C SHU2P38957 223 aa6.65□□□□□ -1.35
VPS72YDR485C SLS1P42900 643 aa6.65□□□□□ -1.35
VPS72YDR485C TAN1P53072 289 aaPredicted RBP6.65□□□□□ -1.35
VPS72YDR485C YAP1802P53309 568 aa6.65□□□□□ -1.35
VPS72YDR485C CNM67P53865 581 aaKnown RBP6.65□□□□□ -1.35
VPS72YDR485C SPN1Q06505 410 aaPredicted RBP6.65□□□□□ -1.35
VPS72YDR485C NHA1Q99271 985 aa6.65□□□□□ -1.35
VPS72YDR485C RET1P22276 1149 aaKnown RBP6.64□□□□□ -1.35
VPS72YDR485C MUD2P36084 527 aaKnown RBP6.64□□□□□ -1.35
VPS72YDR485C TFA2P36145 328 aa6.64□□□□□ -1.35
VPS72YDR485C DOT6P40059 670 aaKnown RBP6.64□□□□□ -1.35
VPS72YDR485C SPP1Q03012 353 aa6.64□□□□□ -1.35
VPS72YDR485C ATP25Q03153 612 aa6.64□□□□□ -1.35
VPS72YDR485C LCD1Q04377 747 aa6.64□□□□□ -1.35
VPS72YDR485C COG8Q04632 607 aa6.64□□□□□ -1.35
VPS72YDR485C DUS3Q06053 668 aaKnown RBP6.64□□□□□ -1.35
VPS72YDR485C HTS1P07263 546 aaKnown RBP6.64□□□□□ -1.35
VPS72YDR485C SPO16P17122 198 aa6.64□□□□□ -1.35
VPS72YDR485C DID4P36108 232 aa6.64□□□□□ -1.35
VPS72YDR485C SLD3P53135 668 aa6.64□□□□□ -1.35
VPS72YDR485C SPC19Q03954 165 aa6.64□□□□□ -1.35
VPS72YDR485C PEX15Q08215 383 aa6.64□□□□□ -1.35
VPS72YDR485C GUP2Q08929 609 aa6.64□□□□□ -1.35
VPS72YDR485C NCR1Q12200 1170 aa6.64□□□□□ -1.35
VPS72YDR485C DHR2P36009 735 aaPredicted RBP6.63□□□□□ -1.35
VPS72YDR485C ABZ1P37254 787 aaPredicted RBP6.63□□□□□ -1.35
VPS72YDR485C PSY4P38193 441 aa6.63□□□□□ -1.35
VPS72YDR485C RGA1P39083 1007 aa6.63□□□□□ -1.35
VPS72YDR485C YGR153WP48238 217 aa6.63□□□□□ -1.35
VPS72YDR485C PPT1P53043 513 aa6.63□□□□□ -1.35
VPS72YDR485C SKY1Q03656 742 aa6.63□□□□□ -1.35
VPS72YDR485C ARA2Q04212 335 aa6.63□□□□□ -1.35
VPS72YDR485C NAT1P12945 854 aaKnown RBP6.62□□□□□ -1.35
VPS72YDR485C CCR4P31384 837 aaKnown RBP6.62□□□□□ -1.35
VPS72YDR485C PET309P32522 965 aaPredicted RBP6.62□□□□□ -1.35
VPS72YDR485C VMA8P32610 256 aaKnown RBP6.62□□□□□ -1.35
VPS72YDR485C ALG3P38179 458 aa6.62□□□□□ -1.35
VPS72YDR485C HNT2P49775 206 aa6.62□□□□□ -1.35
VPS72YDR485C YGR016WP53209 190 aa6.62□□□□□ -1.35
VPS72YDR485C RSC58Q07979 502 aa6.62□□□□□ -1.35
VPS72YDR485C GNT1Q12096 491 aa6.62□□□□□ -1.35
VPS72YDR485C HSP82P02829 709 aaKnown RBP6.62□□□□□ -1.35
VPS72YDR485C PHO81P17442 1178 aa6.62□□□□□ -1.35
VPS72YDR485C TPM1P17536 199 aaKnown RBP6.62□□□□□ -1.35
VPS72YDR485C YKU70P32807 602 aa6.62□□□□□ -1.35
VPS72YDR485C PNT1P38969 423 aa6.62□□□□□ -1.35
VPS72YDR485C SPS1P08458 490 aa6.61□□□□□ -1.35
VPS72YDR485C MET8P15807 274 aa6.61□□□□□ -1.35
VPS72YDR485C AAC3P18238 307 aa6.61□□□□□ -1.35
VPS72YDR485C SHM2P37291 469 aaKnown RBP6.61□□□□□ -1.35
VPS72YDR485C SAP30P38429 201 aa6.61□□□□□ -1.35
VPS72YDR485C YER156CP40093 338 aaKnown RBP6.61□□□□□ -1.35
VPS72YDR485C YJR124CP47159 448 aa6.61□□□□□ -1.35
VPS72YDR485C RGA2Q06407 1009 aa6.61□□□□□ -1.35
VPS72YDR485C RGP1P16664 663 aa6.61□□□□□ -1.35
VPS72YDR485C YKL077WP36081 392 aa6.61□□□□□ -1.35
VPS72YDR485C YRO2P38079 344 aa6.61□□□□□ -1.35
VPS72YDR485C EMP65P40085 556 aa6.61□□□□□ -1.35
VPS72YDR485C RET2P43621 546 aa6.61□□□□□ -1.35
VPS72YDR485C YNR065CP53751 1116 aa6.61□□□□□ -1.35
VPS72YDR485C TAF11Q04226 346 aa6.61□□□□□ -1.35
VPS72YDR485C HIM1Q06674 414 aa6.61□□□□□ -1.35
VPS72YDR485C MET7Q08645 548 aa6.61□□□□□ -1.35
VPS72YDR485C RPS21BQ3E754 87 aaKnown RBP6.61□□□□□ -1.35
VPS72YDR485C ATP12P22135 325 aa6.6□□□□□ -1.35
VPS72YDR485C RER1P25560 188 aa6.6□□□□□ -1.35
VPS72YDR485C PER1P25625 357 aa6.6□□□□□ -1.35
VPS72YDR485C VRP1P37370 817 aa6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms