RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C NPP1P25353 742 aa5.09□□□□□ -1.59
RUB1YDR139C CDC48P25694 835 aaKnown RBP5.09□□□□□ -1.59
RUB1YDR139C AFR1P33304 620 aa5.09□□□□□ -1.59
RUB1YDR139C TSA1P34760 196 aaKnown RBP5.09□□□□□ -1.59
RUB1YDR139C YBR284WP38150 797 aa5.09□□□□□ -1.59
RUB1YDR139C ECM21P38167 1117 aaKnown RBP5.09□□□□□ -1.59
RUB1YDR139C TSL1P38427 1098 aaKnown RBP5.09□□□□□ -1.59
RUB1YDR139C LAM1P38851 1228 aa5.09□□□□□ -1.59
RUB1YDR139C NPP2P39997 493 aa5.09□□□□□ -1.59
RUB1YDR139C CHZ1P40019 153 aaPredicted RBP5.09□□□□□ -1.59
RUB1YDR139C CCM1P48237 864 aaPredicted RBP5.09□□□□□ -1.59
RUB1YDR139C SFB2P53953 876 aa5.09□□□□□ -1.59
RUB1YDR139C YPR196WQ06595 470 aa5.09□□□□□ -1.59
RUB1YDR139C CDA2Q06703 312 aa5.09□□□□□ -1.59
RUB1YDR139C CAN1P04817 590 aa5.08□□□□□ -1.6
RUB1YDR139C SRM1P21827 482 aa5.08□□□□□ -1.6
RUB1YDR139C DOM34P33309 386 aa5.08□□□□□ -1.6
RUB1YDR139C PET10P36139 283 aa5.08□□□□□ -1.6
RUB1YDR139C PBP1P53297 722 aaKnown RBP5.08□□□□□ -1.6
RUB1YDR139C ROT1Q03691 256 aa5.08□□□□□ -1.6
RUB1YDR139C YPR071WQ12346 211 aa5.08□□□□□ -1.6
RUB1YDR139C MSD1P15179 658 aaKnown RBP5.07□□□□□ -1.6
RUB1YDR139C REC104P33323 182 aa5.07□□□□□ -1.6
RUB1YDR139C PBP2P38151 413 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
RUB1YDR139C YBR238CP38330 731 aaKnown RBP5.07□□□□□ -1.6
RUB1YDR139C ZRG8P40021 1076 aa5.07□□□□□ -1.6
RUB1YDR139C TOK1P40310 691 aa5.07□□□□□ -1.6
RUB1YDR139C OSW7P43611 510 aa5.07□□□□□ -1.6
RUB1YDR139C BUL2Q03758 920 aaKnown RBP5.07□□□□□ -1.6
RUB1YDR139C PPM2Q08282 695 aa5.07□□□□□ -1.6
RUB1YDR139C TOP3P13099 656 aa5.06□□□□□ -1.6
RUB1YDR139C ENA1P13587 1091 aa5.06□□□□□ -1.6
RUB1YDR139C SRP101P32916 621 aa5.06□□□□□ -1.6
RUB1YDR139C BET3P36149 193 aa5.06□□□□□ -1.6
RUB1YDR139C AIM3P38266 947 aaKnown RBP5.06□□□□□ -1.6
RUB1YDR139C MEF2P39677 819 aa5.06□□□□□ -1.6
RUB1YDR139C MND2P40577 368 aa5.06□□□□□ -1.6
RUB1YDR139C YKE2P52553 114 aa5.06□□□□□ -1.6
RUB1YDR139C RTA1P53047 317 aa5.06□□□□□ -1.6
RUB1YDR139C YGR012WP53206 393 aa5.06□□□□□ -1.6
RUB1YDR139C ENA2Q01896 1091 aa5.06□□□□□ -1.6
RUB1YDR139C PLB2Q03674 706 aa5.06□□□□□ -1.6
RUB1YDR139C ENA5Q12691 1091 aa5.06□□□□□ -1.6
RUB1YDR139C SOD2P00447 233 aa5.05□□□□□ -1.6
RUB1YDR139C TOM70P07213 617 aaKnown RBP5.05□□□□□ -1.6
RUB1YDR139C HSF1P10961 833 aa5.05□□□□□ -1.6
RUB1YDR139C BUD6P41697 788 aa5.05□□□□□ -1.6
RUB1YDR139C UBP6P43593 499 aaKnown RBP5.05□□□□□ -1.6
RUB1YDR139C RIM8P53179 542 aa5.05□□□□□ -1.6
RUB1YDR139C ORC1P54784 914 aaPredicted RBP5.05□□□□□ -1.6
RUB1YDR139C GCN5Q03330 439 aa5.05□□□□□ -1.6
RUB1YDR139C YDR132CQ03900 495 aa5.05□□□□□ -1.6
RUB1YDR139C RPP2AP05319 106 aaKnown RBP5.04□□□□□ -1.6
RUB1YDR139C RPS13P05756 151 aaKnown RBP5.04□□□□□ -1.6
RUB1YDR139C PRP6P19735 899 aaPredicted RBP5.04□□□□□ -1.6
RUB1YDR139C YKL222CP35995 705 aa5.04□□□□□ -1.6
RUB1YDR139C ERT1P38140 529 aa5.04□□□□□ -1.6
RUB1YDR139C POA1P38218 177 aa5.04□□□□□ -1.6
RUB1YDR139C NUP82P40368 713 aa5.04□□□□□ -1.6
RUB1YDR139C PSP2P50109 593 aaKnown RBP5.04□□□□□ -1.6
RUB1YDR139C SPT20P50875 604 aa5.04□□□□□ -1.6
RUB1YDR139C GTF1P53260 183 aaPredicted RBP5.04□□□□□ -1.6
RUB1YDR139C DUS4Q06063 367 aa5.04□□□□□ -1.6
RUB1YDR139C CDA1Q06702 301 aa5.04□□□□□ -1.6
RUB1YDR139C RXT3Q07458 294 aa5.04□□□□□ -1.6
RUB1YDR139C YPL277CQ08989 487 aa5.04□□□□□ -1.6
RUB1YDR139C TIM23P32897 222 aa5.03□□□□□ -1.6
RUB1YDR139C TPO1Q07824 586 aa5.03□□□□□ -1.6
RUB1YDR139C GPB1Q08886 897 aa5.03□□□□□ -1.6
RUB1YDR139C NOT3P06102 836 aaKnown RBP5.02□□□□□ -1.61
RUB1YDR139C SPE1P08432 466 aa5.02□□□□□ -1.61
RUB1YDR139C CIT2P08679 460 aa5.02□□□□□ -1.61
RUB1YDR139C YCR015CP25616 317 aa5.02□□□□□ -1.61
RUB1YDR139C RAI1P53063 387 aaKnown RBP5.02□□□□□ -1.61
RUB1YDR139C VPS30Q02948 557 aa5.02□□□□□ -1.61
RUB1YDR139C YLR125WQ12138 136 aa5.02□□□□□ -1.61
RUB1YDR139C ERR1P0CX10 437 aa5.01□□□□□ -1.61
RUB1YDR139C ERR2P0CX11 437 aa5.01□□□□□ -1.61
RUB1YDR139C RFA1P22336 621 aaKnown RBP5.01□□□□□ -1.61
RUB1YDR139C TOD6P34219 525 aa5.01□□□□□ -1.61
RUB1YDR139C NIT3P49954 291 aa5.01□□□□□ -1.61
RUB1YDR139C ACK1Q07622 623 aaPredicted RBP5.01□□□□□ -1.61
RUB1YDR139C ADY3Q07732 790 aa5.01□□□□□ -1.61
RUB1YDR139C CDC6P09119 513 aa5□□□□□ -1.61
RUB1YDR139C MPH2P0CD99 609 aa5□□□□□ -1.61
RUB1YDR139C PHO8P11491 566 aa5□□□□□ -1.61
RUB1YDR139C EMC1P25574 760 aa5□□□□□ -1.61
RUB1YDR139C STE13P33894 931 aa5□□□□□ -1.61
RUB1YDR139C ATG19P35193 415 aa5□□□□□ -1.61
RUB1YDR139C ALG2P43636 503 aa5□□□□□ -1.61
RUB1YDR139C MET12P46151 657 aa5□□□□□ -1.61
RUB1YDR139C GCV2P49095 1034 aa5□□□□□ -1.61
RUB1YDR139C VPS62P53285 467 aa5□□□□□ -1.61
RUB1YDR139C ENV7Q12003 364 aa5□□□□□ -1.61
RUB1YDR139C HMI1Q12039 706 aa5□□□□□ -1.61
RUB1YDR139C CDC20P26309 610 aa4.99□□□□□ -1.61
RUB1YDR139C THI80P35202 319 aa4.99□□□□□ -1.61
RUB1YDR139C EMC3P36039 253 aa4.99□□□□□ -1.61
RUB1YDR139C GDH3P39708 457 aa4.99□□□□□ -1.61
RUB1YDR139C NOP12Q08208 459 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 102.4 ms