RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	SRP101	P32916	621 aa		4.14	□□□□□ -1.75
SWF1	YDR126W	KRI1	P42846	591 aa	Known RBP	4.14	□□□□□ -1.75
SWF1	YDR126W	YGR053C	P53234	283 aa		4.14	□□□□□ -1.75
SWF1	YDR126W	NPC2	Q12408	173 aa		4.14	□□□□□ -1.75
SWF1	YDR126W	RPC82	P32349	654 aa		4.13	□□□□□ -1.75
SWF1	YDR126W	YPT53	P36019	220 aa		4.13	□□□□□ -1.75
SWF1	YDR126W	SAH1	P39954	449 aa	Known RBP	4.13	□□□□□ -1.75
SWF1	YDR126W	NCS6	P53088	359 aa		4.13	□□□□□ -1.75
SWF1	YDR126W	SRP1	Q02821	542 aa	Known RBP	4.12	□□□□□ -1.75
SWF1	YDR126W	GUP2	Q08929	609 aa		4.12	□□□□□ -1.75
SWF1	YDR126W	CDC12	P32468	407 aa	Known RBP	4.11	□□□□□ -1.75
SWF1	YDR126W	OAR1	P35731	278 aa		4.11	□□□□□ -1.75
SWF1	YDR126W	NPP2	P39997	493 aa		4.11	□□□□□ -1.75
SWF1	YDR126W	ESC2	Q06340	456 aa		4.11	□□□□□ -1.75
SWF1	YDR126W	PPM2	Q08282	695 aa		4.11	□□□□□ -1.75
SWF1	YDR126W	LAS17	Q12446	633 aa		4.11	□□□□□ -1.75
SWF1	YDR126W	KAR4	P25583	335 aa		4.1	□□□□□ -1.75
SWF1	YDR126W	SBA1	P28707	216 aa	Known RBP	4.1	□□□□□ -1.75
SWF1	YDR126W	ABD1	P32783	436 aa	Predicted RBP	4.1	□□□□□ -1.75
SWF1	YDR126W	MOH1	P38191	138 aa		4.1	□□□□□ -1.75
SWF1	YDR126W	FAA4	P47912	694 aa	Known RBP	4.1	□□□□□ -1.75
SWF1	YDR126W	AGP1	P25376	633 aa		4.09	□□□□□ -1.75
SWF1	YDR126W	EFT1	P32324	842 aa	Known RBP	4.09	□□□□□ -1.75
SWF1	YDR126W	GYP7	P48365	746 aa		4.09	□□□□□ -1.75
SWF1	YDR126W	BUL1	P48524	976 aa		4.09	□□□□□ -1.75
SWF1	YDR126W	SFB2	P53953	876 aa		4.09	□□□□□ -1.75
SWF1	YDR126W	CLN2	P20438	545 aa		4.08	□□□□□ -1.76
SWF1	YDR126W	YKR078W	P36158	585 aa	Known RBP	4.08	□□□□□ -1.76
SWF1	YDR126W	GDE1	Q02979	1223 aa		4.08	□□□□□ -1.76
SWF1	YDR126W	WHI4	Q07655	649 aa	Known RBP	4.08	□□□□□ -1.76
SWF1	YDR126W	NAP1	P25293	417 aa	Known RBP	4.07	□□□□□ -1.76
SWF1	YDR126W	KTR4	P38131	464 aa		4.07	□□□□□ -1.76
SWF1	YDR126W	MBP1	P39678	833 aa		4.07	□□□□□ -1.76
SWF1	YDR126W	YER158C	P40095	573 aa		4.07	□□□□□ -1.76
SWF1	YDR126W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SWF1	YDR126W	DUS3	Q06053	668 aa	Known RBP	4.07	□□□□□ -1.76
SWF1	YDR126W	UPC2	Q12151	913 aa		4.07	□□□□□ -1.76
SWF1	YDR126W	YBR238C	P38330	731 aa	Known RBP	4.06	□□□□□ -1.76
SWF1	YDR126W	UBA2	P52488	636 aa		4.06	□□□□□ -1.76
SWF1	YDR126W	YLR040C	Q07988	224 aa		4.06	□□□□□ -1.76
SWF1	YDR126W	YOL073C	Q08232	322 aa		4.06	□□□□□ -1.76
SWF1	YDR126W	FAL1	Q12099	399 aa	Known RBP	4.06	□□□□□ -1.76
SWF1	YDR126W	SED4	P25365	1065 aa		4.05	□□□□□ -1.76
SWF1	YDR126W	STE14	P32584	239 aa		4.05	□□□□□ -1.76
SWF1	YDR126W	RAI1	P53063	387 aa	Known RBP	4.05	□□□□□ -1.76
SWF1	YDR126W	SHE9	Q04172	456 aa		4.05	□□□□□ -1.76
SWF1	YDR126W	YPR196W	Q06595	470 aa		4.05	□□□□□ -1.76
SWF1	YDR126W	TRP4	P07285	380 aa	Predicted RBP	4.04	□□□□□ -1.76
SWF1	YDR126W	CAD1	P24813	409 aa	Known RBP	4.04	□□□□□ -1.76
SWF1	YDR126W	TSL1	P38427	1098 aa	Known RBP	4.04	□□□□□ -1.76
SWF1	YDR126W	YKE2	P52553	114 aa		4.04	□□□□□ -1.76
SWF1	YDR126W	PIN2	Q12057	282 aa		4.04	□□□□□ -1.76
SWF1	YDR126W	ERG4	P25340	473 aa		4.03	□□□□□ -1.76
SWF1	YDR126W	CDC48	P25694	835 aa	Known RBP	4.03	□□□□□ -1.76
SWF1	YDR126W	VBA5	P36172	582 aa		4.03	□□□□□ -1.76
SWF1	YDR126W	SUL1	P38359	859 aa		4.03	□□□□□ -1.76
SWF1	YDR126W	CWC24	P53769	259 aa		4.03	□□□□□ -1.76
SWF1	YDR126W	VPS16	Q03308	798 aa		4.03	□□□□□ -1.76
SWF1	YDR126W	OMS1	Q06668	471 aa		4.03	□□□□□ -1.76
SWF1	YDR126W	MAD1	P40957	749 aa		4.02	□□□□□ -1.77
SWF1	YDR126W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
SWF1	YDR126W	YML122C	Q03207	126 aa		4.02	□□□□□ -1.77
SWF1	YDR126W	SVF1	Q05515	481 aa		4.02	□□□□□ -1.77
SWF1	YDR126W	YDR306C	Q06640	478 aa		4.02	□□□□□ -1.77
SWF1	YDR126W	OPI10	Q08202	246 aa		4.02	□□□□□ -1.77
SWF1	YDR126W	NOT3	P06102	836 aa	Known RBP	4.01	□□□□□ -1.77
SWF1	YDR126W	PPH3	P32345	308 aa		4.01	□□□□□ -1.77
SWF1	YDR126W	RNT1	Q02555	471 aa		4.01	□□□□□ -1.77
SWF1	YDR126W	SLU7	Q02775	382 aa	Known RBP	4.01	□□□□□ -1.77
SWF1	YDR126W	MCH5	Q08777	521 aa		4.01	□□□□□ -1.77
SWF1	YDR126W	FBP1	P09201	348 aa		4	□□□□□ -1.77
SWF1	YDR126W	NPP1	P25353	742 aa		4	□□□□□ -1.77
SWF1	YDR126W	AFR1	P33304	620 aa		4	□□□□□ -1.77
SWF1	YDR126W	STE13	P33894	931 aa		4	□□□□□ -1.77
SWF1	YDR126W	SIT1	P39980	628 aa		4	□□□□□ -1.77
SWF1	YDR126W	QRI1	P43123	477 aa	Known RBP	4	□□□□□ -1.77
SWF1	YDR126W	ERG5	P54781	538 aa		4	□□□□□ -1.77
SWF1	YDR126W	TMN2	Q04562	672 aa		4	□□□□□ -1.77
SWF1	YDR126W	ACF2	Q12168	779 aa		4	□□□□□ -1.77
SWF1	YDR126W	ADE8	P04161	214 aa		3.99	□□□□□ -1.77
SWF1	YDR126W	PPR1	P07272	904 aa	Predicted RBP	3.99	□□□□□ -1.77
SWF1	YDR126W	MRP8	P35719	219 aa		3.99	□□□□□ -1.77
SWF1	YDR126W	YKL069W	P36088	180 aa		3.99	□□□□□ -1.77
SWF1	YDR126W	PBY1	P38254	753 aa		3.99	□□□□□ -1.77
SWF1	YDR126W	STU2	P46675	888 aa		3.99	□□□□□ -1.77
SWF1	YDR126W	TPO2	P53283	614 aa		3.99	□□□□□ -1.77
SWF1	YDR126W	TIM44	Q01852	431 aa		3.99	□□□□□ -1.77
SWF1	YDR126W	VPS30	Q02948	557 aa		3.99	□□□□□ -1.77
SWF1	YDR126W	SEC21	P32074	935 aa	Known RBP	3.98	□□□□□ -1.77
SWF1	YDR126W	AAR2	P32357	355 aa	Predicted RBP	3.98	□□□□□ -1.77
SWF1	YDR126W	SDP1	P40479	209 aa		3.98	□□□□□ -1.77
SWF1	YDR126W	STB4	P50104	949 aa		3.98	□□□□□ -1.77
SWF1	YDR126W	SSL1	Q04673	461 aa	Predicted RBP	3.98	□□□□□ -1.77
SWF1	YDR126W	ALG7	P07286	448 aa		3.97	□□□□□ -1.77
SWF1	YDR126W	PEX19	Q07418	342 aa		3.97	□□□□□ -1.77
SWF1	YDR126W	IRC10	Q08118	586 aa		3.97	□□□□□ -1.77
SWF1	YDR126W	TRM13	Q12383	476 aa		3.97	□□□□□ -1.77
SWF1	YDR126W	PRI2	P20457	528 aa		3.96	□□□□□ -1.78
SWF1	YDR126W	SCT1	P32784	759 aa		3.96	□□□□□ -1.78
SWF1	YDR126W	CTF13	P35203	478 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms