RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	RPL11B	Q3E757	174 aa	Predicted RBP	6.73	□□□□□ -1.33
SNF11	YDR073W	KCC4	P25389	1037 aa		6.72	□□□□□ -1.33
SNF11	YDR073W	CDC12	P32468	407 aa	Known RBP	6.72	□□□□□ -1.33
SNF11	YDR073W	HOG1	P32485	435 aa		6.72	□□□□□ -1.33
SNF11	YDR073W	ERT1	P38140	529 aa		6.72	□□□□□ -1.33
SNF11	YDR073W	POL5	P39985	1022 aa	Known RBP	6.72	□□□□□ -1.33
SNF11	YDR073W	PRK1	P40494	810 aa		6.72	□□□□□ -1.33
SNF11	YDR073W	NIT3	P49954	291 aa		6.72	□□□□□ -1.33
SNF11	YDR073W	YGR283C	P53336	341 aa	Predicted RBP	6.72	□□□□□ -1.33
SNF11	YDR073W	ATP25	Q03153	612 aa		6.72	□□□□□ -1.33
SNF11	YDR073W	BUL2	Q03758	920 aa	Known RBP	6.72	□□□□□ -1.33
SNF11	YDR073W	MET7	Q08645	548 aa		6.72	□□□□□ -1.33
SNF11	YDR073W	YLL054C	Q12244	843 aa		6.72	□□□□□ -1.33
SNF11	YDR073W	EMC3	P36039	253 aa		6.71	□□□□□ -1.34
SNF11	YDR073W	OSH7	P38755	437 aa		6.71	□□□□□ -1.34
SNF11	YDR073W	DOT6	P40059	670 aa	Known RBP	6.71	□□□□□ -1.34
SNF11	YDR073W	IES1	P43579	692 aa		6.71	□□□□□ -1.34
SNF11	YDR073W	RSC8	P43609	557 aa	Known RBP	6.71	□□□□□ -1.34
SNF11	YDR073W	MNN11	P46985	422 aa	Known RBP	6.71	□□□□□ -1.34
SNF11	YDR073W	YGR153W	P48238	217 aa		6.71	□□□□□ -1.34
SNF11	YDR073W	AIM14	P53109	570 aa		6.71	□□□□□ -1.34
SNF11	YDR073W	YDR514C	Q04408	483 aa		6.71	□□□□□ -1.34
SNF11	YDR073W	YMR074C	Q04773	145 aa		6.71	□□□□□ -1.34
SNF11	YDR073W	ATG33	Q06485	197 aa		6.71	□□□□□ -1.34
SNF11	YDR073W	FPS1	P23900	669 aa		6.7	□□□□□ -1.34
SNF11	YDR073W	GLY1	P37303	387 aa	Known RBP	6.7	□□□□□ -1.34
SNF11	YDR073W	EXO84	P38261	753 aa		6.7	□□□□□ -1.34
SNF11	YDR073W	QNS1	P38795	714 aa	Known RBP	6.7	□□□□□ -1.34
SNF11	YDR073W	MXR1	P40029	184 aa		6.7	□□□□□ -1.34
SNF11	YDR073W	GPP2	P40106	250 aa	Known RBP	6.7	□□□□□ -1.34
SNF11	YDR073W	SOK2	P53438	785 aa	Predicted RBP	6.7	□□□□□ -1.34
SNF11	YDR073W	GUP2	Q08929	609 aa		6.7	□□□□□ -1.34
SNF11	YDR073W	ALG6	Q12001	544 aa	Known RBP	6.7	□□□□□ -1.34
SNF11	YDR073W	HMG1	P12683	1054 aa		6.69	□□□□□ -1.34
SNF11	YDR073W	DBP2	P24783	546 aa	Known RBP	6.69	□□□□□ -1.34
SNF11	YDR073W	AFR1	P33304	620 aa		6.69	□□□□□ -1.34
SNF11	YDR073W	MCD4	P36051	919 aa		6.69	□□□□□ -1.34
SNF11	YDR073W	TAF1	P46677	1066 aa		6.69	□□□□□ -1.34
SNF11	YDR073W	YMR265C	Q03508	461 aa	Known RBP	6.69	□□□□□ -1.34
SNF11	YDR073W	OPT2	Q06593	877 aa		6.69	□□□□□ -1.34
SNF11	YDR073W	ENA1	P13587	1091 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	NPP1	P25353	742 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	GFD2	P25370	566 aa	Known RBP	6.68	□□□□□ -1.34
SNF11	YDR073W	PER1	P25625	357 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	KIP1	P28742	1111 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	PRO1	P32264	428 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	DAL3	P32459	195 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	DID4	P36108	232 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	BIT2	P38346	545 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	YHL041W	P38730	149 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	RPN10	P38886	268 aa	Known RBP	6.68	□□□□□ -1.34
SNF11	YDR073W	EMP65	P40085	556 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	HIS6	P40545	261 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	SAP185	P40856	1058 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	NAM8	Q00539	523 aa	Known RBP	6.68	□□□□□ -1.34
SNF11	YDR073W	ENA2	Q01896	1091 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	RSA3	Q05942	220 aa	Known RBP	6.68	□□□□□ -1.34
SNF11	YDR073W	ENA5	Q12691	1091 aa		6.68	□□□□□ -1.34
SNF11	YDR073W	PFK1	P16861	987 aa	Known RBP	6.67	□□□□□ -1.34
SNF11	YDR073W	DIT1	P21623	536 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	TDA3	P38758	523 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	YAP1801	P38856	637 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	RRP8	P38961	392 aa	Known RBP	6.67	□□□□□ -1.34
SNF11	YDR073W	RET2	P43621	546 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	SLD3	P53135	668 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	SCW11	P53189	542 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	MDM1	Q01846	1127 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	NHX1	Q04121	633 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	REH1	Q06709	432 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	ACM1	Q08981	209 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	ENV7	Q12003	364 aa		6.67	□□□□□ -1.34
SNF11	YDR073W	MPH2	P0CD99	609 aa		6.66	□□□□□ -1.34
SNF11	YDR073W	PHO81	P17442	1178 aa		6.66	□□□□□ -1.34
SNF11	YDR073W	DBF20	P32328	564 aa		6.66	□□□□□ -1.34
SNF11	YDR073W	KTR4	P38131	464 aa		6.66	□□□□□ -1.34
SNF11	YDR073W	GPB2	P39717	880 aa		6.66	□□□□□ -1.34
SNF11	YDR073W	YGR045C	P53229	120 aa		6.66	□□□□□ -1.34
SNF11	YDR073W	ELA1	P53861	379 aa	Predicted RBP	6.66	□□□□□ -1.34
SNF11	YDR073W	YML131W	Q03102	365 aa		6.66	□□□□□ -1.34
SNF11	YDR073W	TY1A-DR2	Q03964	440 aa	Known RBP	6.66	□□□□□ -1.34
SNF11	YDR073W	HRQ1	Q05549	1077 aa		6.66	□□□□□ -1.34
SNF11	YDR073W	TY1A-BL	Q12266	440 aa		6.66	□□□□□ -1.34
SNF11	YDR073W	RRI2	Q12348	645 aa		6.66	□□□□□ -1.34
SNF11	YDR073W	INH1	P01097	85 aa		6.65	□□□□□ -1.34
SNF11	YDR073W	APA1	P16550	321 aa	Known RBP	6.65	□□□□□ -1.34
SNF11	YDR073W	COX11	P19516	300 aa	Known RBP	6.65	□□□□□ -1.34
SNF11	YDR073W	HEM12	P32347	362 aa	Predicted RBP	6.65	□□□□□ -1.34
SNF11	YDR073W	JNM1	P36224	373 aa		6.65	□□□□□ -1.34
SNF11	YDR073W	RPT2	P40327	437 aa	Known RBP	6.65	□□□□□ -1.34
SNF11	YDR073W	YPR027C	Q12079	277 aa		6.65	□□□□□ -1.34
SNF11	YDR073W	SLA2	P33338	968 aa		6.64	□□□□□ -1.35
SNF11	YDR073W	ACO2	P39533	789 aa		6.64	□□□□□ -1.35
SNF11	YDR073W	GIP2	P40036	548 aa		6.64	□□□□□ -1.35
SNF11	YDR073W	ALY2	P47029	1046 aa		6.64	□□□□□ -1.35
SNF11	YDR073W	UBA2	P52488	636 aa		6.64	□□□□□ -1.35
SNF11	YDR073W	ECM9	Q02202	377 aa		6.64	□□□□□ -1.35
SNF11	YDR073W	SKY1	Q03656	742 aa		6.64	□□□□□ -1.35
SNF11	YDR073W	YDR338C	Q05497	695 aa		6.64	□□□□□ -1.35
SNF11	YDR073W	PEX15	Q08215	383 aa		6.64	□□□□□ -1.35
SNF11	YDR073W	ELG1	Q12050	791 aa		6.64	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms