RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W ENV7Q12003 364 aa7.24□□□□□ -1.25
TRP1YDR007W YDL176WQ12027 708 aa7.24□□□□□ -1.25
TRP1YDR007W BI4P03879 638 aa7.23□□□□□ -1.25
TRP1YDR007W SFA1P32771 386 aa7.23□□□□□ -1.25
TRP1YDR007W NIT1P40447 199 aa7.23□□□□□ -1.25
TRP1YDR007W GPP1P41277 250 aaKnown RBP7.23□□□□□ -1.25
TRP1YDR007W YNR014WP53719 212 aa7.23□□□□□ -1.25
TRP1YDR007W MTQ2Q03920 221 aaPredicted RBP7.23□□□□□ -1.25
TRP1YDR007W GAS5Q08193 484 aa7.23□□□□□ -1.25
TRP1YDR007W MET7Q08645 548 aa7.23□□□□□ -1.25
TRP1YDR007W RSC6P25632 483 aa7.22□□□□□ -1.25
TRP1YDR007W CDC48P25694 835 aaKnown RBP7.22□□□□□ -1.25
TRP1YDR007W MDJ1P35191 511 aa7.22□□□□□ -1.25
TRP1YDR007W CCZ1P38273 704 aa7.22□□□□□ -1.25
TRP1YDR007W YER158CP40095 573 aa7.22□□□□□ -1.25
TRP1YDR007W EAR1Q03212 550 aa7.22□□□□□ -1.25
TRP1YDR007W COG8Q04632 607 aa7.22□□□□□ -1.25
TRP1YDR007W RCL1Q08096 367 aaPredicted RBP7.22□□□□□ -1.25
TRP1YDR007W TMA7Q3E764 64 aaKnown RBP7.22□□□□□ -1.25
TRP1YDR007W EUG1P32474 517 aa7.21□□□□□ -1.26
TRP1YDR007W SEC6P32844 805 aa7.21□□□□□ -1.26
TRP1YDR007W PIK1P39104 1066 aa7.21□□□□□ -1.26
TRP1YDR007W GBP2P25555 427 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
TRP1YDR007W PRP19P32523 503 aaKnown RBP7.2□□□□□ -1.26
TRP1YDR007W YBR071WP38243 211 aa7.2□□□□□ -1.26
TRP1YDR007W YHL012WP38709 493 aa7.2□□□□□ -1.26
TRP1YDR007W TY4A-JP47023 414 aa7.2□□□□□ -1.26
TRP1YDR007W MTC3P53077 123 aa7.2□□□□□ -1.26
TRP1YDR007W YGR035CP53222 116 aa7.2□□□□□ -1.26
TRP1YDR007W BUD9P53226 547 aa7.2□□□□□ -1.26
TRP1YDR007W SRT1Q03175 343 aa7.2□□□□□ -1.26
TRP1YDR007W GUD1Q07729 489 aa7.2□□□□□ -1.26
TRP1YDR007W TRE2Q08693 809 aa7.2□□□□□ -1.26
TRP1YDR007W MPH2P0CD99 609 aa7.19□□□□□ -1.26
TRP1YDR007W PER1P25625 357 aa7.19□□□□□ -1.26
TRP1YDR007W GIC1P38785 314 aa7.19□□□□□ -1.26
TRP1YDR007W RRT14P40470 206 aa7.19□□□□□ -1.26
TRP1YDR007W YJR096WP47137 282 aa7.19□□□□□ -1.26
TRP1YDR007W SUB1P54000 292 aaKnown RBP7.19□□□□□ -1.26
TRP1YDR007W YPR196WQ06595 470 aa7.19□□□□□ -1.26
TRP1YDR007W REH1Q06709 432 aa7.19□□□□□ -1.26
TRP1YDR007W RSB1Q08417 382 aa7.19□□□□□ -1.26
TRP1YDR007W SLX4Q12098 748 aa7.19□□□□□ -1.26
TRP1YDR007W AI1P03875 834 aa7.18□□□□□ -1.26
TRP1YDR007W FUN30P31380 1131 aa7.18□□□□□ -1.26
TRP1YDR007W HOG1P32485 435 aa7.18□□□□□ -1.26
TRP1YDR007W MCD4P36051 919 aa7.18□□□□□ -1.26
TRP1YDR007W PCM1P38628 557 aaKnown RBP7.18□□□□□ -1.26
TRP1YDR007W CKB2P38930 258 aa7.18□□□□□ -1.26
TRP1YDR007W COG6P53959 839 aa7.18□□□□□ -1.26
TRP1YDR007W SNP1Q00916 300 aaPredicted RBP7.18□□□□□ -1.26
TRP1YDR007W GIN4Q12263 1142 aa7.18□□□□□ -1.26
TRP1YDR007W SSN2P38931 1420 aa7.18□□□□□ -1.26
TRP1YDR007W SRO9P25567 434 aaKnown RBP7.17□□□□□ -1.26
TRP1YDR007W MDL2P33311 773 aa7.17□□□□□ -1.26
TRP1YDR007W RPN10P38886 268 aaKnown RBP7.17□□□□□ -1.26
TRP1YDR007W PMC1P38929 1173 aaPredicted RBP7.17□□□□□ -1.26
TRP1YDR007W NPP2P39997 493 aa7.17□□□□□ -1.26
TRP1YDR007W SBE2P42223 864 aaKnown RBP7.17□□□□□ -1.26
TRP1YDR007W YKE2P52553 114 aa7.17□□□□□ -1.26
TRP1YDR007W PEX14P53112 341 aa7.17□□□□□ -1.26
TRP1YDR007W SND1Q04007 877 aa7.17□□□□□ -1.26
TRP1YDR007W OSW2Q12202 724 aa7.17□□□□□ -1.26
TRP1YDR007W AI3P03877 415 aa7.16□□□□□ -1.26
TRP1YDR007W RFA1P22336 621 aaKnown RBP7.16□□□□□ -1.26
TRP1YDR007W DAS1P47005 663 aa7.16□□□□□ -1.26
TRP1YDR007W AIM14P53109 570 aa7.16□□□□□ -1.26
TRP1YDR007W SFB2P53953 876 aa7.16□□□□□ -1.26
TRP1YDR007W NBA1Q08229 501 aaKnown RBP7.16□□□□□ -1.26
TRP1YDR007W YTM1Q12024 460 aaPredicted RBP7.16□□□□□ -1.26
TRP1YDR007W YVC1Q12324 675 aa7.16□□□□□ -1.26
TRP1YDR007W SAM35P14693 329 aa7.15□□□□□ -1.26
TRP1YDR007W ACE2P21192 770 aa7.15□□□□□ -1.26
TRP1YDR007W MMM1P41800 426 aa7.15□□□□□ -1.26
TRP1YDR007W ATG33Q06485 197 aa7.15□□□□□ -1.26
TRP1YDR007W GUP2Q08929 609 aa7.15□□□□□ -1.26
TRP1YDR007W DAL7P21826 554 aa7.14□□□□□ -1.27
TRP1YDR007W DOT6P40059 670 aaKnown RBP7.14□□□□□ -1.27
TRP1YDR007W NOG2P53742 486 aaKnown RBP7.14□□□□□ -1.27
TRP1YDR007W NHX1Q04121 633 aa7.14□□□□□ -1.27
TRP1YDR007W TY1B-DR4Q07793 1604 aa7.14□□□□□ -1.27
TRP1YDR007W RSC58Q07979 502 aa7.14□□□□□ -1.27
TRP1YDR007W YOR059CQ08448 450 aaKnown RBP7.14□□□□□ -1.27
TRP1YDR007W YOR378WQ08902 515 aa7.14□□□□□ -1.27
TRP1YDR007W SVS1Q12254 260 aa7.14□□□□□ -1.27
TRP1YDR007W NYV1Q12255 253 aa7.14□□□□□ -1.27
TRP1YDR007W TRK2P28584 889 aa7.13□□□□□ -1.27
TRP1YDR007W RPC82P32349 654 aa7.13□□□□□ -1.27
TRP1YDR007W WHI3P34761 661 aaKnown RBP7.13□□□□□ -1.27
TRP1YDR007W CIT3P43635 486 aa7.13□□□□□ -1.27
TRP1YDR007W ALY2P47029 1046 aa7.13□□□□□ -1.27
TRP1YDR007W TAD1P53065 400 aa7.13□□□□□ -1.27
TRP1YDR007W ATP4P05626 244 aa7.12□□□□□ -1.27
TRP1YDR007W HMG1P12683 1054 aa7.12□□□□□ -1.27
TRP1YDR007W PLC1P32383 869 aa7.12□□□□□ -1.27
TRP1YDR007W OAF1P39720 1047 aaPredicted RBP7.12□□□□□ -1.27
TRP1YDR007W GZF3P42944 551 aaKnown RBP7.12□□□□□ -1.27
TRP1YDR007W DUG1P43616 481 aaKnown RBP7.12□□□□□ -1.27
TRP1YDR007W HFM1P51979 1187 aa7.12□□□□□ -1.27
TRP1YDR007W ARI1P53111 347 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms