RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 RNF123Q5XPI4 1314 aa10.78□□□□□ -0.68
PHGDH-217ENST00000641455 ST5P78524 1137 aa10.77□□□□□ -0.69
PHGDH-217ENST00000641455 CCDC93Q567U6 631 aa10.77□□□□□ -0.69
PHGDH-217ENST00000641455 SULT6B1Q6IMI4 303 aa10.77□□□□□ -0.69
PHGDH-217ENST00000641455 STYK1Q6J9G0 422 aa10.77□□□□□ -0.69
PHGDH-217ENST00000641455 CYP4F22Q6NT55 531 aa10.77□□□□□ -0.69
PHGDH-217ENST00000641455 CNBD1Q8NA66 436 aa10.77□□□□□ -0.69
PHGDH-217ENST00000641455 GPR101Q96P66 508 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-217ENST00000641455 MCOLN1Q9GZU1 580 aa10.77□□□□□ -0.69
PHGDH-217ENST00000641455 ZNF277Q9NRM2 450 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-217ENST00000641455 AKAP4Q5JQC9 854 aa10.76□□□□□ -0.69
PHGDH-217ENST00000641455 NPM2Q86SE8 214 aaKnown RBP10.76□□□□□ -0.69
PHGDH-217ENST00000641455 MASTLQ96GX5 879 aa10.76□□□□□ -0.69
PHGDH-217ENST00000641455 DDX21Q9NR30 783 aaKnown RBP eCLIP10.76□□□□□ -0.69
PHGDH-217ENST00000641455 TBC1D2BQ9UPU7 963 aa10.76□□□□□ -0.69
PHGDH-217ENST00000641455 PDE4DIPQ5VU43 2346 aa10.75□□□□□ -0.69
PHGDH-217ENST00000641455 ADAMTSL1Q8N6G6 1762 aa10.75□□□□□ -0.69
PHGDH-217ENST00000641455 ARFGEF2Q9Y6D5 1785 aa10.75□□□□□ -0.69
PHGDH-217ENST00000641455 STARD3NLO95772 234 aa10.75□□□□□ -0.69
PHGDH-217ENST00000641455 SRGNP10124 158 aa10.75□□□□□ -0.69
PHGDH-217ENST00000641455 FKBP4Q02790 459 aaKnown RBP eCLIP10.75□□□□□ -0.69
PHGDH-217ENST00000641455 SETDB2Q96T68 719 aa10.75□□□□□ -0.69
PHGDH-217ENST00000641455 LGR6Q9HBX8 967 aa10.75□□□□□ -0.69
PHGDH-217ENST00000641455 THSD7BQ9C0I4 1608 aa10.75□□□□□ -0.69
PHGDH-217ENST00000641455 SCN7AQ01118 1682 aa10.75□□□□□ -0.69
PHGDH-217ENST00000641455 CASP8AP2Q9UKL3 1982 aa10.74□□□□□ -0.69
PHGDH-217ENST00000641455 RNMTO43148 476 aaKnown RBP10.74□□□□□ -0.69
PHGDH-217ENST00000641455 LMOD1P29536 600 aaPredicted RBP10.74□□□□□ -0.69
PHGDH-217ENST00000641455 EIF5P55010 431 aaKnown RBP10.74□□□□□ -0.69
PHGDH-217ENST00000641455 DGKZQ13574 1117 aa10.74□□□□□ -0.69
PHGDH-217ENST00000641455 TTC5Q8N0Z6 440 aa10.74□□□□□ -0.69
PHGDH-217ENST00000641455 GJA3Q9Y6H8 435 aa10.74□□□□□ -0.69
PHGDH-217ENST00000641455 AOC2O75106 756 aa10.73□□□□□ -0.69
PHGDH-217ENST00000641455 FMR1Q06787 632 aaKnown RBP eCLIP10.73□□□□□ -0.69
PHGDH-217ENST00000641455 VSIG10Q8N0Z9 540 aa10.73□□□□□ -0.69
PHGDH-217ENST00000641455 MRC1P22897 1456 aa10.73□□□□□ -0.69
PHGDH-217ENST00000641455 IARSP41252 1262 aaKnown RBP10.72□□□□□ -0.69
PHGDH-217ENST00000641455 GPC2Q8N158 579 aa10.72□□□□□ -0.69
PHGDH-217ENST00000641455 LTBP1Q14766 1721 aa10.72□□□□□ -0.69
PHGDH-217ENST00000641455 TRPM7Q96QT4 1865 aa10.72□□□□□ -0.69
PHGDH-217ENST00000641455 TRAF5O00463 557 aa10.71□□□□□ -0.69
PHGDH-217ENST00000641455 CA12O43570 354 aa10.71□□□□□ -0.69
PHGDH-217ENST00000641455 NPR1P16066 1061 aa10.71□□□□□ -0.69
PHGDH-217ENST00000641455 EIF6P56537 245 aaKnown RBP10.71□□□□□ -0.69
PHGDH-217ENST00000641455 OLFM4Q6UX06 510 aa10.71□□□□□ -0.69
PHGDH-217ENST00000641455 NBPF5PQ86XG9 351 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-217ENST00000641455 RTKN2Q8IZC4 609 aa10.71□□□□□ -0.69
PHGDH-217ENST00000641455 JDP2Q8WYK2 163 aa10.71□□□□□ -0.69
PHGDH-217ENST00000641455 FZD9O00144 591 aa10.7□□□□□ -0.7
PHGDH-217ENST00000641455 MAP2K2P36507 400 aa10.7□□□□□ -0.7
PHGDH-217ENST00000641455 SOX10P56693 466 aa10.7□□□□□ -0.7
PHGDH-217ENST00000641455 SYNE4Q8N205 404 aa10.7□□□□□ -0.7
PHGDH-217ENST00000641455 C7orf43Q8WVR3 580 aa10.7□□□□□ -0.7
PHGDH-217ENST00000641455 TLL2Q9Y6L7 1015 aa10.7□□□□□ -0.7
PHGDH-217ENST00000641455 UBR2Q8IWV8 1755 aa10.7□□□□□ -0.7
PHGDH-217ENST00000641455 CAMTA2O94983 1202 aa10.69□□□□□ -0.7
PHGDH-217ENST00000641455 IL6STP40189 918 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-217ENST00000641455 MORC1Q86VD1 984 aa10.69□□□□□ -0.7
PHGDH-217ENST00000641455 DZIP3Q86Y13 1208 aaKnown RBP10.69□□□□□ -0.7
PHGDH-217ENST00000641455 FAM177BA6PVY3 158 aa10.68□□□□□ -0.7
PHGDH-217ENST00000641455 CELF2O95319 508 aaKnown RBP10.68□□□□□ -0.7
PHGDH-217ENST00000641455 HMOX1P09601 288 aa10.68□□□□□ -0.7
PHGDH-217ENST00000641455 EPS15P42566 896 aa10.68□□□□□ -0.7
PHGDH-217ENST00000641455 CST9Q5W186 159 aa10.68□□□□□ -0.7
PHGDH-217ENST00000641455 ZNF496Q96IT1 587 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-217ENST00000641455 TEX13AQ9BXU3 409 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-217ENST00000641455 ZNF408Q9H9D4 720 aa10.68□□□□□ -0.7
PHGDH-217ENST00000641455 HEG1Q9ULI3 1381 aa10.67□□□□□ -0.7
PHGDH-217ENST00000641455 A1BGP04217 495 aa10.67□□□□□ -0.7
PHGDH-217ENST00000641455 IL13P35225 146 aa10.67□□□□□ -0.7
PHGDH-217ENST00000641455 BRPF1P55201 1214 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-217ENST00000641455 PRPF38BQ5VTL8 546 aaKnown RBP10.67□□□□□ -0.7
PHGDH-217ENST00000641455 CIAPIN1Q6FI81 312 aa10.67□□□□□ -0.7
PHGDH-217ENST00000641455 BCORQ6W2J9 1755 aa10.67□□□□□ -0.7
PHGDH-217ENST00000641455 ALDH1B1P30837 517 aa10.66□□□□□ -0.7
PHGDH-217ENST00000641455 SCNN1DP51172 638 aa10.66□□□□□ -0.7
PHGDH-217ENST00000641455 TEFQ10587 303 aa10.66□□□□□ -0.7
PHGDH-217ENST00000641455 MTHFSDQ2M296 383 aaKnown RBP10.66□□□□□ -0.7
PHGDH-217ENST00000641455 USP50Q70EL3 339 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-217ENST00000641455 LARGE2Q8N3Y3 721 aa10.66□□□□□ -0.7
PHGDH-217ENST00000641455 ZNF652Q9Y2D9 606 aa10.66□□□□□ -0.7
PHGDH-217ENST00000641455 GTF2E1P29083 439 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-217ENST00000641455 PIP4K2AP48426 406 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-217ENST00000641455 ZNF790Q6PG37 636 aa10.65□□□□□ -0.7
PHGDH-217ENST00000641455 TPTE2Q6XPS3 522 aa10.65□□□□□ -0.7
PHGDH-217ENST00000641455 SAPCD2Q86UD0 394 aa10.65□□□□□ -0.7
PHGDH-217ENST00000641455 PANK3Q9H999 370 aa10.65□□□□□ -0.7
PHGDH-217ENST00000641455 NIP7Q9Y221 180 aaKnown RBP eCLIP10.65□□□□□ -0.7
PHGDH-217ENST00000641455 NIM1KQ8IY84 436 aa10.64□□□□□ -0.71
PHGDH-217ENST00000641455 FMNL2Q96PY5 1086 aa10.64□□□□□ -0.71
PHGDH-217ENST00000641455 PSMD1Q99460 953 aa10.64□□□□□ -0.71
PHGDH-217ENST00000641455 GLIS2Q9BZE0 524 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-217ENST00000641455 TNRC18O15417 2968 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-217ENST00000641455 NOGQ13253 232 aa10.63□□□□□ -0.71
PHGDH-217ENST00000641455 ADARB2Q9NS39 739 aaKnown RBP10.63□□□□□ -0.71
PHGDH-217ENST00000641455 COL4A5P29400 1685 aa10.63□□□□□ -0.71
PHGDH-217ENST00000641455 KLRG2A4D1S0 409 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-217ENST00000641455 TCERG1O14776 1098 aaKnown RBP10.62□□□□□ -0.71
PHGDH-217ENST00000641455 CC2D2BQ6DHV5 1058 aa10.62□□□□□ -0.71
PHGDH-217ENST00000641455 CLEC4GQ6UXB4 293 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms