RNA–Protein interactions for RNA: ENST00000640094.1

HLA-B-257, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 147 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-257ENST00000640094 MASTLQ96GX5 879 aa11.74□□□□□ -0.53
HLA-B-257ENST00000640094 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
HLA-B-257ENST00000640094 TEX13AQ9BXU3 409 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-257ENST00000640094 HACL1Q9UJ83 578 aa11.74□□□□□ -0.53
HLA-B-257ENST00000640094 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-257ENST00000640094 HEG1Q9ULI3 1381 aa11.74□□□□□ -0.53
HLA-B-257ENST00000640094 LTBP1Q14766 1721 aa11.74□□□□□ -0.53
HLA-B-257ENST00000640094 LAMB4A4D0S4 1761 aa11.74□□□□□ -0.53
HLA-B-257ENST00000640094 IL6STP40189 918 aaPredicted RBP11.73□□□□□ -0.53
HLA-B-257ENST00000640094 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
HLA-B-257ENST00000640094 LGR6Q9HBX8 967 aa11.73□□□□□ -0.53
HLA-B-257ENST00000640094 PCDH10Q9P2E7 1040 aa11.73□□□□□ -0.53
HLA-B-257ENST00000640094 SRGNP10124 158 aa11.72□□□□□ -0.53
HLA-B-257ENST00000640094 EPHX2P34913 555 aa11.72□□□□□ -0.53
HLA-B-257ENST00000640094 FKBP4Q02790 459 aaKnown RBP eCLIP11.72□□□□□ -0.53
HLA-B-257ENST00000640094 MLLT1Q03111 559 aaPredicted RBP11.72□□□□□ -0.53
HLA-B-257ENST00000640094 TEFQ10587 303 aa11.72□□□□□ -0.53
HLA-B-257ENST00000640094 ABT1Q9ULW3 272 aaKnown RBP11.72□□□□□ -0.53
HLA-B-257ENST00000640094 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
HLA-B-257ENST00000640094 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.53
HLA-B-257ENST00000640094 ZNF541Q9H0D2 1346 aa11.71□□□□□ -0.53
HLA-B-257ENST00000640094 ITGBL1O95965 494 aaPredicted RBP11.71□□□□□ -0.53
HLA-B-257ENST00000640094 DEFB115Q30KQ5 88 aa11.71□□□□□ -0.53
HLA-B-257ENST00000640094 PANK3Q9H999 370 aa11.71□□□□□ -0.53
HLA-B-257ENST00000640094 TIMELESSQ9UNS1 1208 aa11.71□□□□□ -0.53
HLA-B-257ENST00000640094 ZNF652Q9Y2D9 606 aa11.71□□□□□ -0.53
HLA-B-257ENST00000640094 RNF123Q5XPI4 1314 aa11.7□□□□□ -0.54
HLA-B-257ENST00000640094 NPR1P16066 1061 aa11.7□□□□□ -0.54
HLA-B-257ENST00000640094 ECE1P42892 770 aa11.7□□□□□ -0.54
HLA-B-257ENST00000640094 NBPF5PQ86XG9 351 aaPredicted RBP11.7□□□□□ -0.54
HLA-B-257ENST00000640094 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
HLA-B-257ENST00000640094 CCDC24Q8N4L8 307 aa11.7□□□□□ -0.54
HLA-B-257ENST00000640094 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
HLA-B-257ENST00000640094 KNSTRNQ9Y448 316 aa11.7□□□□□ -0.54
HLA-B-257ENST00000640094 CAMTA2O94983 1202 aa11.69□□□□□ -0.54
HLA-B-257ENST00000640094 HMOX1P09601 288 aa11.69□□□□□ -0.54
HLA-B-257ENST00000640094 MTHFSDQ2M296 383 aaKnown RBP11.69□□□□□ -0.54
HLA-B-257ENST00000640094 ZNF790Q6PG37 636 aa11.69□□□□□ -0.54
HLA-B-257ENST00000640094 CNTROBQ8N137 903 aa11.69□□□□□ -0.54
HLA-B-257ENST00000640094 GPC2Q8N158 579 aa11.69□□□□□ -0.54
HLA-B-257ENST00000640094 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
HLA-B-257ENST00000640094 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
HLA-B-257ENST00000640094 CCDC85CA6NKD9 419 aa11.68□□□□□ -0.54
HLA-B-257ENST00000640094 LMOD1P29536 600 aaPredicted RBP11.68□□□□□ -0.54
HLA-B-257ENST00000640094 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
HLA-B-257ENST00000640094 DZIP3Q86Y13 1208 aaKnown RBP11.68□□□□□ -0.54
HLA-B-257ENST00000640094 ZNF277Q9NRM2 450 aaPredicted RBP11.68□□□□□ -0.54
HLA-B-257ENST00000640094 IARSP41252 1262 aaKnown RBP11.67□□□□□ -0.54
HLA-B-257ENST00000640094 EIF4G2P78344 907 aaKnown RBP eCLIP11.67□□□□□ -0.54
HLA-B-257ENST00000640094 MAP1SQ66K74 1059 aaPredicted RBP11.67□□□□□ -0.54
HLA-B-257ENST00000640094 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
HLA-B-257ENST00000640094 JDP2Q8WYK2 163 aa11.67□□□□□ -0.54
HLA-B-257ENST00000640094 RGL2O15211 777 aa11.66□□□□□ -0.54
HLA-B-257ENST00000640094 CA12O43570 354 aa11.66□□□□□ -0.54
HLA-B-257ENST00000640094 DIAPH1O60610 1272 aaKnown RBP11.66□□□□□ -0.54
HLA-B-257ENST00000640094 EIF6P56537 245 aaKnown RBP11.66□□□□□ -0.54
HLA-B-257ENST00000640094 CLEC4GQ6UXB4 293 aa11.66□□□□□ -0.54
HLA-B-257ENST00000640094 C7orf43Q8WVR3 580 aa11.66□□□□□ -0.54
HLA-B-257ENST00000640094 CAPNS2Q96L46 248 aa11.66□□□□□ -0.54
HLA-B-257ENST00000640094 DDX21Q9NR30 783 aaKnown RBP eCLIP11.66□□□□□ -0.54
HLA-B-257ENST00000640094 COL3A1P02461 1466 aaPredicted RBP11.65□□□□□ -0.54
HLA-B-257ENST00000640094 GNAT3A8MTJ3 354 aa11.65□□□□□ -0.54
HLA-B-257ENST00000640094 FZD9O00144 591 aa11.65□□□□□ -0.54
HLA-B-257ENST00000640094 ALDH1B1P30837 517 aa11.65□□□□□ -0.54
HLA-B-257ENST00000640094 RGS19P49795 217 aa11.65□□□□□ -0.54
HLA-B-257ENST00000640094 PSMD1Q99460 953 aa11.65□□□□□ -0.54
HLA-B-257ENST00000640094 SNED1Q8TER0 1413 aa11.65□□□□□ -0.54
HLA-B-257ENST00000640094 CEMIPQ8WUJ3 1361 aa11.65□□□□□ -0.55
HLA-B-257ENST00000640094 NUP98P52948 1817 aa11.65□□□□□ -0.55
HLA-B-257ENST00000640094 RIC1Q4ADV7 1423 aa11.64□□□□□ -0.55
HLA-B-257ENST00000640094 A1BGP04217 495 aa11.64□□□□□ -0.55
HLA-B-257ENST00000640094 GRM1Q13255 1194 aa11.64□□□□□ -0.55
HLA-B-257ENST00000640094 TPTE2Q6XPS3 522 aa11.64□□□□□ -0.55
HLA-B-257ENST00000640094 CLSPNQ9HAW4 1339 aa11.63□□□□□ -0.55
HLA-B-257ENST00000640094 COL4A5P29400 1685 aa11.63□□□□□ -0.55
HLA-B-257ENST00000640094 KLRG2A4D1S0 409 aaPredicted RBP11.63□□□□□ -0.55
HLA-B-257ENST00000640094 GRIPAP1Q4V328 841 aa11.63□□□□□ -0.55
HLA-B-257ENST00000640094 CC2D2BQ6DHV5 1058 aa11.63□□□□□ -0.55
HLA-B-257ENST00000640094 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
HLA-B-257ENST00000640094 GPR101Q96P66 508 aaPredicted RBP11.63□□□□□ -0.55
HLA-B-257ENST00000640094 NIP7Q9Y221 180 aaKnown RBP eCLIP11.63□□□□□ -0.55
HLA-B-257ENST00000640094 CASP8AP2Q9UKL3 1982 aa11.62□□□□□ -0.55
HLA-B-257ENST00000640094 GTF2E1P29083 439 aaPredicted RBP11.62□□□□□ -0.55
HLA-B-257ENST00000640094 MAP2K2P36507 400 aa11.62□□□□□ -0.55
HLA-B-257ENST00000640094 CYP4F22Q6NT55 531 aa11.62□□□□□ -0.55
HLA-B-257ENST00000640094 USP50Q70EL3 339 aaPredicted RBP11.62□□□□□ -0.55
HLA-B-257ENST00000640094 SYNE4Q8N205 404 aa11.62□□□□□ -0.55
HLA-B-257ENST00000640094 GJA3Q9Y6H8 435 aa11.62□□□□□ -0.55
HLA-B-257ENST00000640094 PDE4DIPQ5VU43 2346 aa11.61□□□□□ -0.55
HLA-B-257ENST00000640094 BTBD11A6QL63 1104 aa11.61□□□□□ -0.55
HLA-B-257ENST00000640094 HSPA5P11021 654 aaKnown RBP11.61□□□□□ -0.55
HLA-B-257ENST00000640094 AMER1Q5JTC6 1135 aaPredicted RBP11.61□□□□□ -0.55
HLA-B-257ENST00000640094 NYXQ9GZU5 481 aa11.61□□□□□ -0.55
HLA-B-257ENST00000640094 TLL2Q9Y6L7 1015 aa11.61□□□□□ -0.55
HLA-B-257ENST00000640094 IBTKQ9P2D0 1353 aaPredicted RBP11.61□□□□□ -0.55
HLA-B-257ENST00000640094 KDM3BQ7LBC6 1761 aa11.61□□□□□ -0.55
HLA-B-257ENST00000640094 DDX60Q8IY21 1712 aaKnown RBP11.6□□□□□ -0.55
HLA-B-257ENST00000640094 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
HLA-B-257ENST00000640094 OLFM4Q6UX06 510 aa11.6□□□□□ -0.55
HLA-B-257ENST00000640094 IL17REQ8NFR9 667 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms