RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 MCM10Q7L590 875 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 PAIP2Q9BPZ3 127 aaKnown RBP6.67□□□□□ -1.34
SCARB2-218ENST00000639715 A0A0G2JS52 829 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 DCTN1Q14203 1278 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 RAPGEF4Q8WZA2 1011 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 PSMD1Q99460 953 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 PAXBP1Q9Y5B6 917 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 TET3O43151 1660 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 MYO1CO00159 1063 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 MMP14P50281 582 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 ZSCAN26Q16670 478 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 TTC22Q5TAA0 569 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 HOMER1Q86YM7 354 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 ANKRD44Q8N8A2 993 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 DDX41Q9UJV9 622 aaKnown RBP6.67□□□□□ -1.34
SCARB2-218ENST00000639715 TNNQ9UQP3 1299 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 MX1P20591 662 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 SYT10Q6XYQ8 523 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 CCDC34Q96HJ3 373 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 TPM1P09493 284 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 TAF7Q15545 349 aaPredicted RBP6.66□□□□□ -1.34
SCARB2-218ENST00000639715 RIC3Q7Z5B4 369 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 TRIM5Q9C035 493 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 DCTPP1Q9H773 170 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 TRIM35Q9UPQ4 493 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 USP19O94966 1318 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 RIMS2Q9UQ26 1411 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 SMTNL1A8MU46 457 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 GUCY2CP25092 1073 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 MAP2K1Q02750 393 aaPredicted RBP6.66□□□□□ -1.34
SCARB2-218ENST00000639715 ZSCAN31Q96LW9 406 aaPredicted RBP6.66□□□□□ -1.34
SCARB2-218ENST00000639715 TTC21AQ8NDW8 1320 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 PPIP5K1Q6PFW1 1433 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 VPS37CA5D8V6 355 aaPredicted RBP6.66□□□□□ -1.34
SCARB2-218ENST00000639715 GOLGA6L19H0YKK7 550 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 HMGB1P09429 215 aaKnown RBP6.66□□□□□ -1.34
SCARB2-218ENST00000639715 NUTM2GQ5VZR2 741 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 CEP120Q8N960 986 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 KIF1BPQ96EK5 621 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 SUFUQ9UMX1 484 aa6.66□□□□□ -1.34
SCARB2-218ENST00000639715 GYS2P54840 703 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 SF3A1Q15459 793 aaKnown RBP6.65□□□□□ -1.34
SCARB2-218ENST00000639715 HSP90B2PQ58FF3 399 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 UBXN4Q92575 508 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 CXorf56Q9H5V9 222 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 CTNNA3Q9UI47 895 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 KIF1BO60333 1816 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 ZBTB7BO15156 539 aaPredicted RBP6.65□□□□□ -1.34
SCARB2-218ENST00000639715 SRGAP3O43295 1099 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 PSEN1P49768 467 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 ANKRD1Q15327 319 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 PTPN14Q15678 1187 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 KIF18AQ8NI77 898 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 PDLIM2Q96JY6 352 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 EXOC6BQ9Y2D4 811 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 CYP46A1Q9Y6A2 500 aa6.65□□□□□ -1.34
SCARB2-218ENST00000639715 TRIM66O15016 1216 aa6.65□□□□□ -1.35
SCARB2-218ENST00000639715 UVSSAQ2YD98 709 aa6.65□□□□□ -1.35
SCARB2-218ENST00000639715 ZNF530Q6P9A1 599 aaPredicted RBP6.65□□□□□ -1.35
SCARB2-218ENST00000639715 MICALL1Q8N3F8 863 aa6.65□□□□□ -1.35
SCARB2-218ENST00000639715 KCNH5Q8NCM2 988 aa6.65□□□□□ -1.35
SCARB2-218ENST00000639715 IVLP07476 585 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 C8orf58Q8NAV2 365 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 CPSF2Q9P2I0 782 aaKnown RBP6.64□□□□□ -1.35
SCARB2-218ENST00000639715 ACEP12821 1306 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 CDC42BPBQ9Y5S2 1711 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 MLH3Q9UHC1 1453 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 BECN2A8MW95 431 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 KIF1CO43896 1103 aaKnown RBP6.64□□□□□ -1.35
SCARB2-218ENST00000639715 GLRX3O76003 335 aaKnown RBP6.64□□□□□ -1.35
SCARB2-218ENST00000639715 NEBLO76041 1014 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 CPLX2Q6PUV4 134 aaKnown RBP6.64□□□□□ -1.35
SCARB2-218ENST00000639715 CALR3Q96L12 384 aaKnown RBP6.64□□□□□ -1.35
SCARB2-218ENST00000639715 EDC4Q6P2E9 1401 aaKnown RBP6.64□□□□□ -1.35
SCARB2-218ENST00000639715 SOS1Q07889 1333 aaPredicted RBP6.64□□□□□ -1.35
SCARB2-218ENST00000639715 LIG1P18858 919 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 BRPF1P55201 1214 aaPredicted RBP6.64□□□□□ -1.35
SCARB2-218ENST00000639715 FLIIQ13045 1269 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 CEP135Q66GS9 1140 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 PPM1EQ8WY54 764 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 FSD1Q9BTV5 496 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 CARD10Q9BWT7 1032 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 FBXO3Q9UK99 471 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 FAM83GA6ND36 823 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 SMARCA5O60264 1052 aaPredicted RBP6.64□□□□□ -1.35
SCARB2-218ENST00000639715 PHACTR3Q96KR7 559 aa6.64□□□□□ -1.35
SCARB2-218ENST00000639715 MORC2Q9Y6X9 1032 aaPredicted RBP6.64□□□□□ -1.35
SCARB2-218ENST00000639715 TNRQ92752 1358 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 MYO3AQ8NEV4 1616 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 HCLS1P14317 486 aaPredicted RBP6.63□□□□□ -1.35
SCARB2-218ENST00000639715 ANAPC15P60006 121 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 GBP6Q6ZN66 633 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 MIS18AQ9NYP9 233 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 RRP15Q9Y3B9 282 aaKnown RBP6.63□□□□□ -1.35
SCARB2-218ENST00000639715 KIF24Q5T7B8 1368 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 KIF2AO00139 706 aaPredicted RBP6.63□□□□□ -1.35
SCARB2-218ENST00000639715 NCBP1Q09161 790 aaKnown RBP6.63□□□□□ -1.35
SCARB2-218ENST00000639715 ESCO1Q5FWF5 840 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 FILIP1Q7Z7B0 1213 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 BICD2Q8TD16 824 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms