RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 TLL2Q9Y6L7 1015 aa15.21■□□□□ 0.03
PTP4A1-207ENST00000639568 NRXN2Q9P2S2 1712 aa15.2■□□□□ 0.02
PTP4A1-207ENST00000639568 SRGNP10124 158 aa15.2■□□□□ 0.02
PTP4A1-207ENST00000639568 BRPF1P55201 1214 aaPredicted RBP15.2■□□□□ 0.02
PTP4A1-207ENST00000639568 ST5P78524 1137 aa15.2■□□□□ 0.02
PTP4A1-207ENST00000639568 FKBP4Q02790 459 aaKnown RBP eCLIP15.2■□□□□ 0.02
PTP4A1-207ENST00000639568 CDCA8Q53HL2 280 aa15.2■□□□□ 0.02
PTP4A1-207ENST00000639568 CNBD1Q8NA66 436 aa15.2■□□□□ 0.02
PTP4A1-207ENST00000639568 FMR1Q06787 632 aaKnown RBP eCLIP15.19■□□□□ 0.02
PTP4A1-207ENST00000639568 CST9Q5W186 159 aa15.19■□□□□ 0.02
PTP4A1-207ENST00000639568 SETDB2Q96T68 719 aa15.19■□□□□ 0.02
PTP4A1-207ENST00000639568 CARD14Q9BXL6 1004 aa15.19■□□□□ 0.02
PTP4A1-207ENST00000639568 AFDNP55196 1824 aaKnown RBP15.19■□□□□ 0.02
PTP4A1-207ENST00000639568 DICER1Q9UPY3 1922 aaKnown RBP15.18■□□□□ 0.02
PTP4A1-207ENST00000639568 TNNT2P45379 298 aaPredicted RBP15.18■□□□□ 0.02
PTP4A1-207ENST00000639568 RTKN2Q8IZC4 609 aa15.18■□□□□ 0.02
PTP4A1-207ENST00000639568 JDP2Q8WYK2 163 aa15.18■□□□□ 0.02
PTP4A1-207ENST00000639568 GJA3Q9Y6H8 435 aa15.18■□□□□ 0.02
PTP4A1-207ENST00000639568 ADAMTS7Q9UKP4 1686 aa15.18■□□□□ 0.02
PTP4A1-207ENST00000639568 FER1L6Q2WGJ9 1857 aa15.18■□□□□ 0.02
PTP4A1-207ENST00000639568 FZD9O00144 591 aa15.17■□□□□ 0.02
PTP4A1-207ENST00000639568 TRAF5O00463 557 aa15.17■□□□□ 0.02
PTP4A1-207ENST00000639568 STARD3NLO95772 234 aa15.17■□□□□ 0.02
PTP4A1-207ENST00000639568 NPM2Q86SE8 214 aaKnown RBP15.17■□□□□ 0.02
PTP4A1-207ENST00000639568 GCC1Q96CN9 775 aa15.17■□□□□ 0.02
PTP4A1-207ENST00000639568 SLC52A2Q9HAB3 445 aa15.17■□□□□ 0.02
PTP4A1-207ENST00000639568 ZNF330Q9Y3S2 320 aaPredicted RBP15.17■□□□□ 0.02
PTP4A1-207ENST00000639568 TJP1Q07157 1748 aa15.17■□□□□ 0.02
PTP4A1-207ENST00000639568 SLC39A6Q13433 755 aa15.16■□□□□ 0.02
PTP4A1-207ENST00000639568 SAPCD2Q86UD0 394 aa15.16■□□□□ 0.02
PTP4A1-207ENST00000639568 C7orf43Q8WVR3 580 aa15.16■□□□□ 0.02
PTP4A1-207ENST00000639568 THSD7BQ9C0I4 1608 aa15.16■□□□□ 0.02
PTP4A1-207ENST00000639568 IARSP41252 1262 aaKnown RBP15.15■□□□□ 0.02
PTP4A1-207ENST00000639568 EIF5P55010 431 aaKnown RBP15.15■□□□□ 0.02
PTP4A1-207ENST00000639568 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
PTP4A1-207ENST00000639568 CIAPIN1Q6FI81 312 aa15.15■□□□□ 0.02
PTP4A1-207ENST00000639568 VSIG10Q8N0Z9 540 aa15.15■□□□□ 0.02
PTP4A1-207ENST00000639568 KIF20BQ96Q89 1820 aa15.15■□□□□ 0.02
PTP4A1-207ENST00000639568 ADAMTSL1Q8N6G6 1762 aa15.14■□□□□ 0.01
PTP4A1-207ENST00000639568 NPR1P16066 1061 aa15.14■□□□□ 0.01
PTP4A1-207ENST00000639568 USP50Q70EL3 339 aaPredicted RBP15.14■□□□□ 0.01
PTP4A1-207ENST00000639568 NBPF15Q8N660 670 aa15.14■□□□□ 0.01
PTP4A1-207ENST00000639568 HHIPL1Q96JK4 782 aa15.14■□□□□ 0.01
PTP4A1-207ENST00000639568 TBC1D2BQ9UPU7 963 aa15.14■□□□□ 0.01
PTP4A1-207ENST00000639568 CELF2O95319 508 aaKnown RBP15.13■□□□□ 0.01
PTP4A1-207ENST00000639568 SYNE4Q8N205 404 aa15.13■□□□□ 0.01
PTP4A1-207ENST00000639568 LTBP1Q14766 1721 aa15.12■□□□□ 0.01
PTP4A1-207ENST00000639568 EPS15P42566 896 aa15.12■□□□□ 0.01
PTP4A1-207ENST00000639568 NOGQ13253 232 aa15.12■□□□□ 0.01
PTP4A1-207ENST00000639568 AKAP4Q5JQC9 854 aa15.12■□□□□ 0.01
PTP4A1-207ENST00000639568 AEBP1Q8IUX7 1158 aa15.12■□□□□ 0.01
PTP4A1-207ENST00000639568 ANKRD26Q9UPS8 1709 aa15.12■□□□□ 0.01
PTP4A1-207ENST00000639568 OLFM4Q6UX06 510 aa15.11■□□□□ 0.01
PTP4A1-207ENST00000639568 NBPF5PQ86XG9 351 aaPredicted RBP15.11■□□□□ 0.01
PTP4A1-207ENST00000639568 LGR6Q9HBX8 967 aa15.11■□□□□ 0.01
PTP4A1-207ENST00000639568 SULT6B1Q6IMI4 303 aa15.1■□□□□ 0.01
PTP4A1-207ENST00000639568 TTC5Q8N0Z6 440 aa15.1■□□□□ 0.01
PTP4A1-207ENST00000639568 ZNF408Q9H9D4 720 aa15.1■□□□□ 0.01
PTP4A1-207ENST00000639568 SLX4Q8IY92 1834 aa15.1■□□□□ 0.01
PTP4A1-207ENST00000639568 SCNN1DP51172 638 aa15.09■□□□□ 0.01
PTP4A1-207ENST00000639568 RNMTO43148 476 aaKnown RBP15.08■□□□□ 0
PTP4A1-207ENST00000639568 ALDH1B1P30837 517 aa15.08■□□□□ 0
PTP4A1-207ENST00000639568 PSMD1Q99460 953 aa15.08■□□□□ 0
PTP4A1-207ENST00000639568 TEX13AQ9BXU3 409 aaPredicted RBP15.08■□□□□ 0
PTP4A1-207ENST00000639568 COL11A2P13942 1736 aaPredicted RBP15.08■□□□□ 0
PTP4A1-207ENST00000639568 ANKRD31Q8N7Z5 1873 aa15.08■□□□□ 0
PTP4A1-207ENST00000639568 CASP8AP2Q9UKL3 1982 aa15.07■□□□□ 0
PTP4A1-207ENST00000639568 IL6STP40189 918 aaPredicted RBP15.07■□□□□ 0
PTP4A1-207ENST00000639568 ADARB2Q9NS39 739 aaKnown RBP15.07■□□□□ 0
PTP4A1-207ENST00000639568 SAGE1Q9NXZ1 904 aa15.07■□□□□ 0
PTP4A1-207ENST00000639568 HABP4Q5JVS0 413 aaKnown RBP15.06■□□□□ 0
PTP4A1-207ENST00000639568 TPTE2Q6XPS3 522 aa15.06■□□□□ 0
PTP4A1-207ENST00000639568 LARGE2Q8N3Y3 721 aa15.06■□□□□ 0
PTP4A1-207ENST00000639568 CAMTA2O94983 1202 aa15.05■□□□□ -0
PTP4A1-207ENST00000639568 CTU1Q7Z7A3 348 aaKnown RBP15.05■□□□□ -0
PTP4A1-207ENST00000639568 GLIS2Q9BZE0 524 aaPredicted RBP15.05■□□□□ -0
PTP4A1-207ENST00000639568 KLRG2A4D1S0 409 aaPredicted RBP15.04■□□□□ -0
PTP4A1-207ENST00000639568 HUNKP57058 714 aa15.04■□□□□ -0
PTP4A1-207ENST00000639568 DZIP3Q86Y13 1208 aaKnown RBP15.04■□□□□ -0
PTP4A1-207ENST00000639568 ZIC5Q96T25 663 aa15.04■□□□□ -0
PTP4A1-207ENST00000639568 TRPA1O75762 1119 aa15.03■□□□□ -0
PTP4A1-207ENST00000639568 GTF2E1P29083 439 aaPredicted RBP15.03■□□□□ -0
PTP4A1-207ENST00000639568 CC2D2BQ6DHV5 1058 aa15.03■□□□□ -0
PTP4A1-207ENST00000639568 GPRC5DQ9NZD1 345 aa15.03■□□□□ -0
PTP4A1-207ENST00000639568 ZNF652Q9Y2D9 606 aa15.03■□□□□ -0
PTP4A1-207ENST00000639568 GRIPAP1Q4V328 841 aa15.02■□□□□ -0
PTP4A1-207ENST00000639568 CDC37L1Q7L3B6 337 aa15.02■□□□□ -0
PTP4A1-207ENST00000639568 NIM1KQ8IY84 436 aa15.02■□□□□ -0
PTP4A1-207ENST00000639568 RNF186Q9NXI6 227 aa15.02■□□□□ -0
PTP4A1-207ENST00000639568 HPS5Q9UPZ3 1129 aa15.02■□□□□ -0
PTP4A1-207ENST00000639568 A1BGP04217 495 aa15.01□□□□□ -0.01
PTP4A1-207ENST00000639568 CLEC4GQ6UXB4 293 aa15.01□□□□□ -0.01
PTP4A1-207ENST00000639568 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
PTP4A1-207ENST00000639568 CCDC102AQ96A19 550 aa15.01□□□□□ -0.01
PTP4A1-207ENST00000639568 ZNF496Q96IT1 587 aaPredicted RBP15.01□□□□□ -0.01
PTP4A1-207ENST00000639568 FAM177BA6PVY3 158 aa15□□□□□ -0.01
PTP4A1-207ENST00000639568 KIF23Q02241 960 aaPredicted RBP15□□□□□ -0.01
PTP4A1-207ENST00000639568 PKN2Q16513 984 aaKnown RBP15□□□□□ -0.01
PTP4A1-207ENST00000639568 ZC3H15Q8WU90 426 aaKnown RBP15□□□□□ -0.01
PTP4A1-207ENST00000639568 RGMBQ6NW40 437 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms