RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 MAP3K11Q16584 847 aa17.47■□□□□ 0.39
KCNMA1-262ENST00000639489 TEX13AQ9BXU3 409 aaPredicted RBP17.47■□□□□ 0.39
KCNMA1-262ENST00000639489 FILIP1LQ4L180 1135 aa17.47■□□□□ 0.39
KCNMA1-262ENST00000639489 LINS1Q8NG48 757 aa17.47■□□□□ 0.39
KCNMA1-262ENST00000639489 SLC5A1P13866 664 aa17.46■□□□□ 0.39
KCNMA1-262ENST00000639489 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
KCNMA1-262ENST00000639489 ZHX3Q9H4I2 956 aa17.46■□□□□ 0.39
KCNMA1-262ENST00000639489 KRT18P05783 430 aaKnown RBP17.46■□□□□ 0.38
KCNMA1-262ENST00000639489 USP5P45974 858 aa17.46■□□□□ 0.38
KCNMA1-262ENST00000639489 CEP57L1Q8IYX8 460 aa17.46■□□□□ 0.38
KCNMA1-262ENST00000639489 TMX3Q96JJ7 454 aa17.46■□□□□ 0.38
KCNMA1-262ENST00000639489 LRRC2Q9BYS8 371 aa17.46■□□□□ 0.38
KCNMA1-262ENST00000639489 NECAB1Q8N987 351 aa17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 NOL7Q9UMY1 257 aaKnown RBP17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 NPC1L1Q9UHC9 1359 aa17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 BAG4O95429 457 aaKnown RBP17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 SF3B2Q13435 895 aaKnown RBP17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 PTPRTO14522 1441 aa17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 GOLGA8BA8MQT2 603 aa17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 ALDH1L1O75891 902 aa17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 IP6K1Q92551 441 aa17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 IQSEC3Q9UPP2 1182 aaPredicted RBP17.45■□□□□ 0.38
KCNMA1-262ENST00000639489 GJB2P29033 226 aa17.44■□□□□ 0.38
KCNMA1-262ENST00000639489 DZIP1Q86YF9 867 aaKnown RBP17.44■□□□□ 0.38
KCNMA1-262ENST00000639489 ESYT1Q9BSJ8 1104 aa17.44■□□□□ 0.38
KCNMA1-262ENST00000639489 MKNK2Q9HBH9 465 aa17.44■□□□□ 0.38
KCNMA1-262ENST00000639489 IFIT3O14879 490 aaKnown RBP17.44■□□□□ 0.38
KCNMA1-262ENST00000639489 SSBP05455 408 aaKnown RBP eCLIP17.44■□□□□ 0.38
KCNMA1-262ENST00000639489 CKAP2LQ8IYA6 745 aa17.44■□□□□ 0.38
KCNMA1-262ENST00000639489 MAST1Q9Y2H9 1570 aa17.44■□□□□ 0.38
KCNMA1-262ENST00000639489 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
KCNMA1-262ENST00000639489 STX6O43752 255 aa17.44■□□□□ 0.38
KCNMA1-262ENST00000639489 HMGB1P09429 215 aaKnown RBP17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 CCAR1Q8IX12 1150 aaKnown RBP17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 CCDC144CPQ8IYA2 1237 aa17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 ZFYVE9O95405 1425 aa17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 MAP3K5Q99683 1374 aa17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 PDIA4P13667 645 aaKnown RBP17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 NEK1Q96PY6 1258 aa17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 BRF1Q92994 677 aa17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 POLR3DP05423 398 aaPredicted RBP17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 GPS2Q13227 327 aa17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 FAM177A1Q8N128 213 aaPredicted RBP17.43■□□□□ 0.38
KCNMA1-262ENST00000639489 SPATA31E1Q6ZUB1 1445 aa17.42■□□□□ 0.38
KCNMA1-262ENST00000639489 PLEKHM2Q8IWE5 1019 aa17.42■□□□□ 0.38
KCNMA1-262ENST00000639489 MICU3Q86XE3 530 aa17.42■□□□□ 0.38
KCNMA1-262ENST00000639489 OTUD7AQ8TE49 926 aaPredicted RBP17.42■□□□□ 0.38
KCNMA1-262ENST00000639489 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
KCNMA1-262ENST00000639489 MAGEC2Q9UBF1 373 aaPredicted RBP17.42■□□□□ 0.38
KCNMA1-262ENST00000639489 SLC12A7Q9Y666 1083 aa17.41■□□□□ 0.38
KCNMA1-262ENST00000639489 LTKP29376 864 aa17.41■□□□□ 0.38
KCNMA1-262ENST00000639489 WASF1Q92558 559 aa17.41■□□□□ 0.38
KCNMA1-262ENST00000639489 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
KCNMA1-262ENST00000639489 RBM8AQ9Y5S9 174 aaKnown RBP17.41■□□□□ 0.38
KCNMA1-262ENST00000639489 HMGN5P82970 282 aaKnown RBP17.41■□□□□ 0.38
KCNMA1-262ENST00000639489 IQCA1Q86XH1 822 aa17.41■□□□□ 0.38
KCNMA1-262ENST00000639489 USP16Q9Y5T5 823 aa17.41■□□□□ 0.38
KCNMA1-262ENST00000639489 SLC4A8Q2Y0W8 1093 aa17.4■□□□□ 0.38
KCNMA1-262ENST00000639489 TARBP1Q13395 1621 aaKnown RBP17.4■□□□□ 0.38
KCNMA1-262ENST00000639489 IL2RBP14784 551 aa17.4■□□□□ 0.38
KCNMA1-262ENST00000639489 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
KCNMA1-262ENST00000639489 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
KCNMA1-262ENST00000639489 CDC5LQ99459 802 aaKnown RBP17.4■□□□□ 0.38
KCNMA1-262ENST00000639489 ATP10AO60312 1499 aa17.39■□□□□ 0.38
KCNMA1-262ENST00000639489 CHL1O00533 1208 aa17.39■□□□□ 0.37
KCNMA1-262ENST00000639489 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
KCNMA1-262ENST00000639489 ATP2B3Q16720 1220 aa17.39■□□□□ 0.37
KCNMA1-262ENST00000639489 CTCFLQ8NI51 663 aaPredicted RBP17.39■□□□□ 0.37
KCNMA1-262ENST00000639489 RBM10P98175 930 aaKnown RBP17.39■□□□□ 0.37
KCNMA1-262ENST00000639489 CCDC183Q5T5S1 534 aa17.39■□□□□ 0.37
KCNMA1-262ENST00000639489 CCDC196A0A1B0GTZ2 297 aa17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 GOLGA8AA7E2F4 631 aa17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 MPHOSPH10O00566 681 aaKnown RBP17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 ORC3Q9UBD5 711 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 TNNT3P45378 269 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 CT47A1Q5JQC4 288 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 DCAF5Q96JK2 942 aa17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 USP25Q9UHP3 1055 aa17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 ATP6V1AP38606 617 aa17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 PPFIBP1Q86W92 1011 aa17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 HELBQ8NG08 1087 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 ARGLU1Q9NWB6 273 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-262ENST00000639489 CFAP100Q494V2 611 aa17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 SMARCE1Q969G3 411 aa17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 TRPM2O94759 1503 aa17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 KDM6BO15054 1643 aa17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 STIM1Q13586 685 aa17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 DHX8Q14562 1220 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 DDB1Q16531 1140 aa17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 KLHL10Q6JEL2 608 aa17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 RPGRQ92834 1020 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 SOS1Q07889 1333 aaPredicted RBP17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 YEATS2Q9ULM3 1422 aa17.37■□□□□ 0.37
KCNMA1-262ENST00000639489 DDX21Q9NR30 783 aaKnown RBP eCLIP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms