RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 ZNF622Q969S3 477 aaKnown RBP eCLIP21.6■■□□□ 1.05
COLCA2-206ENST00000638573 NMRK2Q9NPI5 230 aa21.6■■□□□ 1.05
COLCA2-206ENST00000638573 RNF181Q9P0P0 153 aa21.6■■□□□ 1.05
COLCA2-206ENST00000638573 TSPYL4Q9UJ04 414 aa21.6■■□□□ 1.05
COLCA2-206ENST00000638573 ARFGEF1Q9Y6D6 1849 aa21.59■■□□□ 1.05
COLCA2-206ENST00000638573 H0YIN7 160 aa21.59■■□□□ 1.05
COLCA2-206ENST00000638573 TTLL6Q8N841 843 aa21.59■■□□□ 1.05
COLCA2-206ENST00000638573 PNISRQ8TF01 805 aaKnown RBP21.59■■□□□ 1.05
COLCA2-206ENST00000638573 ANXA1P04083 346 aa21.58■■□□□ 1.05
COLCA2-206ENST00000638573 BRIP1Q9BX63 1249 aa21.58■■□□□ 1.05
COLCA2-206ENST00000638573 LAMB4A4D0S4 1761 aa21.57■■□□□ 1.04
COLCA2-206ENST00000638573 NFKBIEO00221 500 aa21.57■■□□□ 1.04
COLCA2-206ENST00000638573 NPHP1O15259 732 aa21.57■■□□□ 1.04
COLCA2-206ENST00000638573 PROSER3Q2NL68 480 aa21.57■■□□□ 1.04
COLCA2-206ENST00000638573 CCDC184Q52MB2 194 aa21.57■■□□□ 1.04
COLCA2-206ENST00000638573 NECTIN2Q92692 538 aa21.57■■□□□ 1.04
COLCA2-206ENST00000638573 TRIM35Q9UPQ4 493 aa21.57■■□□□ 1.04
COLCA2-206ENST00000638573 NIP7Q9Y221 180 aaKnown RBP eCLIP21.57■■□□□ 1.04
COLCA2-206ENST00000638573 DLEC1Q9Y238 1755 aa21.56■■□□□ 1.04
COLCA2-206ENST00000638573 NBPF5PQ86XG9 351 aaPredicted RBP21.56■■□□□ 1.04
COLCA2-206ENST00000638573 C21orf2O43822 256 aa21.55■■□□□ 1.04
COLCA2-206ENST00000638573 EIF2S2P20042 333 aaKnown RBP21.55■■□□□ 1.04
COLCA2-206ENST00000638573 ZBTB3Q9H5J0 574 aa21.55■■□□□ 1.04
COLCA2-206ENST00000638573 CLEC4GQ6UXB4 293 aa21.54■■□□□ 1.04
COLCA2-206ENST00000638573 RUNDC1Q96C34 613 aa21.54■■□□□ 1.04
COLCA2-206ENST00000638573 MRS2Q9HD23 443 aa21.54■■□□□ 1.04
COLCA2-206ENST00000638573 LAS1LQ9Y4W2 734 aaKnown RBP21.54■■□□□ 1.04
COLCA2-206ENST00000638573 GPTP24298 496 aa21.53■■□□□ 1.04
COLCA2-206ENST00000638573 PDE6BP35913 854 aa21.53■■□□□ 1.04
COLCA2-206ENST00000638573 ST5P78524 1137 aa21.53■■□□□ 1.04
COLCA2-206ENST00000638573 PDIA6Q15084 440 aa21.53■■□□□ 1.04
COLCA2-206ENST00000638573 LRP10Q7Z4F1 713 aa21.53■■□□□ 1.04
COLCA2-206ENST00000638573 SLC51AQ86UW1 340 aa21.53■■□□□ 1.04
COLCA2-206ENST00000638573 ZNF652Q9Y2D9 606 aa21.53■■□□□ 1.04
COLCA2-206ENST00000638573 ABCC12Q96J65 1359 aa21.52■■□□□ 1.04
COLCA2-206ENST00000638573 SRGNP10124 158 aa21.52■■□□□ 1.04
COLCA2-206ENST00000638573 OLFM4Q6UX06 510 aa21.52■■□□□ 1.04
COLCA2-206ENST00000638573 NUTM1Q86Y26 1132 aa21.52■■□□□ 1.04
COLCA2-206ENST00000638573 MAP3K15Q6ZN16 1313 aa21.52■■□□□ 1.03
COLCA2-206ENST00000638573 UBN2Q6ZU65 1347 aa21.52■■□□□ 1.03
COLCA2-206ENST00000638573 PRPF40BQ6NWY9 871 aaKnown RBP21.51■■□□□ 1.03
COLCA2-206ENST00000638573 ZNF428Q96B54 188 aa21.5■■□□□ 1.03
COLCA2-206ENST00000638573 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
COLCA2-206ENST00000638573 TNRC6CQ9HCJ0 1690 aaKnown RBP21.49■■□□□ 1.03
COLCA2-206ENST00000638573 LMOD3Q0VAK6 560 aa21.48■■□□□ 1.03
COLCA2-206ENST00000638573 SLX4Q8IY92 1834 aa21.48■■□□□ 1.03
COLCA2-206ENST00000638573 CHL1O00533 1208 aa21.47■■□□□ 1.03
COLCA2-206ENST00000638573 APAF1O14727 1248 aa21.47■■□□□ 1.03
COLCA2-206ENST00000638573 LMNB1P20700 586 aa21.47■■□□□ 1.03
COLCA2-206ENST00000638573 ERFEQ4G0M1 354 aa21.47■■□□□ 1.03
COLCA2-206ENST00000638573 SUSD4Q5VX71 490 aa21.47■■□□□ 1.03
COLCA2-206ENST00000638573 STYK1Q6J9G0 422 aa21.47■■□□□ 1.03
COLCA2-206ENST00000638573 KIF6Q6ZMV9 814 aa21.47■■□□□ 1.03
COLCA2-206ENST00000638573 MASTLQ96GX5 879 aa21.47■■□□□ 1.03
COLCA2-206ENST00000638573 SBF1O95248 1867 aa21.47■■□□□ 1.03
COLCA2-206ENST00000638573 ERVV-1B6SEH8 477 aa21.46■■□□□ 1.03
COLCA2-206ENST00000638573 C3orf67Q6ZVT6 689 aa21.46■■□□□ 1.03
COLCA2-206ENST00000638573 RRAGCQ9HB90 399 aa21.46■■□□□ 1.03
COLCA2-206ENST00000638573 AIMP1Q12904 312 aaKnown RBP21.45■■□□□ 1.02
COLCA2-206ENST00000638573 TPTE2Q6XPS3 522 aa21.45■■□□□ 1.02
COLCA2-206ENST00000638573 KLRG2A4D1S0 409 aaPredicted RBP21.44■■□□□ 1.02
COLCA2-206ENST00000638573 XAGE3Q8WTP9 111 aa21.44■■□□□ 1.02
COLCA2-206ENST00000638573 C7orf43Q8WVR3 580 aa21.44■■□□□ 1.02
COLCA2-206ENST00000638573 CNKSR1Q969H4 720 aa21.44■■□□□ 1.02
COLCA2-206ENST00000638573 CACNA1SQ13698 1873 aa21.43■■□□□ 1.02
COLCA2-206ENST00000638573 ZNF34Q8IZ26 560 aa21.43■■□□□ 1.02
COLCA2-206ENST00000638573 RGL2O15211 777 aa21.42■■□□□ 1.02
COLCA2-206ENST00000638573 NTSR2O95665 410 aa21.42■■□□□ 1.02
COLCA2-206ENST00000638573 NPR1P16066 1061 aa21.42■■□□□ 1.02
COLCA2-206ENST00000638573 HSPA6P17066 643 aa21.42■■□□□ 1.02
COLCA2-206ENST00000638573 GTF2E1P29083 439 aaPredicted RBP21.42■■□□□ 1.02
COLCA2-206ENST00000638573 ERBB4Q15303 1308 aa21.42■■□□□ 1.02
COLCA2-206ENST00000638573 GIGYF2Q6Y7W6 1299 aaKnown RBP21.42■■□□□ 1.02
COLCA2-206ENST00000638573 COPS6Q7L5N1 327 aa21.42■■□□□ 1.02
COLCA2-206ENST00000638573 MBIPQ9NS73 344 aa21.42■■□□□ 1.02
COLCA2-206ENST00000638573 BABAM1Q9NWV8 329 aa21.42■■□□□ 1.02
COLCA2-206ENST00000638573 CHPF2Q9P2E5 772 aa21.42■■□□□ 1.02
COLCA2-206ENST00000638573 PDZRN3Q9UPQ7 1066 aa21.42■■□□□ 1.02
COLCA2-206ENST00000638573 SYNE4Q8N205 404 aa21.41■■□□□ 1.02
COLCA2-206ENST00000638573 TOMM70O94826 608 aa21.4■■□□□ 1.02
COLCA2-206ENST00000638573 TAOK3Q9H2K8 898 aa21.4■■□□□ 1.02
COLCA2-206ENST00000638573 NUP98P52948 1817 aa21.4■■□□□ 1.02
COLCA2-206ENST00000638573 TIAM2Q8IVF5 1701 aa21.4■■□□□ 1.02
COLCA2-206ENST00000638573 KDM2BQ8NHM5 1336 aa21.39■■□□□ 1.01
COLCA2-206ENST00000638573 HTRA3P83110 453 aa21.39■■□□□ 1.01
COLCA2-206ENST00000638573 GLTPD2A6NH11 291 aa21.38■■□□□ 1.01
COLCA2-206ENST00000638573 POTECB2RU33 542 aa21.38■■□□□ 1.01
COLCA2-206ENST00000638573 ELL2O00472 640 aaPredicted RBP21.38■■□□□ 1.01
COLCA2-206ENST00000638573 HDGFL1Q5TGJ6 251 aa21.38■■□□□ 1.01
COLCA2-206ENST00000638573 ZNF277Q9NRM2 450 aaPredicted RBP21.38■■□□□ 1.01
COLCA2-206ENST00000638573 FER1L6Q2WGJ9 1857 aa21.38■■□□□ 1.01
COLCA2-206ENST00000638573 CCER2I3L3R5 266 aa21.37■■□□□ 1.01
COLCA2-206ENST00000638573 TCERG1O14776 1098 aaKnown RBP21.37■■□□□ 1.01
COLCA2-206ENST00000638573 ZNF853P0CG23 659 aa21.37■■□□□ 1.01
COLCA2-206ENST00000638573 CRY2Q49AN0 593 aa21.37■■□□□ 1.01
COLCA2-206ENST00000638573 DUSP27Q5VZP5 1158 aa21.37■■□□□ 1.01
COLCA2-206ENST00000638573 CFAP44Q96MT7 982 aa21.37■■□□□ 1.01
COLCA2-206ENST00000638573 NYXQ9GZU5 481 aa21.37■■□□□ 1.01
COLCA2-206ENST00000638573 DDX21Q9NR30 783 aaKnown RBP eCLIP21.37■■□□□ 1.01
COLCA2-206ENST00000638573 LTBP3Q9NS15 1303 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms