RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 PHAXQ9H814 394 aaKnown RBP16.83■□□□□ 0.29
SCARB2-208ENST00000638372 HMGN5P82970 282 aaKnown RBP16.83■□□□□ 0.28
SCARB2-208ENST00000638372 G2E3Q7L622 706 aa16.83■□□□□ 0.28
SCARB2-208ENST00000638372 NECAB1Q8N987 351 aa16.83■□□□□ 0.28
SCARB2-208ENST00000638372 MAGEC2Q9UBF1 373 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-208ENST00000638372 RANBP6O60518 1105 aaKnown RBP16.82■□□□□ 0.28
SCARB2-208ENST00000638372 CCAR1Q8IX12 1150 aaKnown RBP16.82■□□□□ 0.28
SCARB2-208ENST00000638372 ZCRB1Q8TBF4 217 aaKnown RBP16.82■□□□□ 0.28
SCARB2-208ENST00000638372 ESYT1Q9BSJ8 1104 aa16.82■□□□□ 0.28
SCARB2-208ENST00000638372 GOLGA8BA8MQT2 603 aa16.82■□□□□ 0.28
SCARB2-208ENST00000638372 HMGB1P09429 215 aaKnown RBP16.82■□□□□ 0.28
SCARB2-208ENST00000638372 LRRC2Q9BYS8 371 aa16.82■□□□□ 0.28
SCARB2-208ENST00000638372 TRIM35Q9UPQ4 493 aa16.82■□□□□ 0.28
SCARB2-208ENST00000638372 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
SCARB2-208ENST00000638372 SSBP05455 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
SCARB2-208ENST00000638372 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
SCARB2-208ENST00000638372 SLC5A1P13866 664 aa16.81■□□□□ 0.28
SCARB2-208ENST00000638372 ANKIB1Q9P2G1 1089 aa16.81■□□□□ 0.28
SCARB2-208ENST00000638372 CCDC183Q5T5S1 534 aa16.81■□□□□ 0.28
SCARB2-208ENST00000638372 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
SCARB2-208ENST00000638372 NEK1Q96PY6 1258 aa16.81■□□□□ 0.28
SCARB2-208ENST00000638372 IFIT3O14879 490 aaKnown RBP16.8■□□□□ 0.28
SCARB2-208ENST00000638372 ZBTB7BO15156 539 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-208ENST00000638372 HOXC9P31274 260 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 ZSCAN30Q86W11 494 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 IL13P35225 146 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 USP5P45974 858 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 LINS1Q8NG48 757 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 WASF1Q92558 559 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 SMARCE1Q969G3 411 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 USP25Q9UHP3 1055 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 HSPA2P54652 639 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 BRF1Q92994 677 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 ALDH1L1O75891 902 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 PPFIBP1Q86W92 1011 aa16.8■□□□□ 0.28
SCARB2-208ENST00000638372 TEX13AQ9BXU3 409 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-208ENST00000638372 PLEKHM2Q8IWE5 1019 aa16.79■□□□□ 0.28
SCARB2-208ENST00000638372 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
SCARB2-208ENST00000638372 NPC1L1Q9UHC9 1359 aa16.79■□□□□ 0.28
SCARB2-208ENST00000638372 CAGE1Q8TC20 777 aa16.79■□□□□ 0.28
SCARB2-208ENST00000638372 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
SCARB2-208ENST00000638372 SAMD9Q5K651 1589 aa16.79■□□□□ 0.28
SCARB2-208ENST00000638372 CT47A1Q5JQC4 288 aaPredicted RBP16.79■□□□□ 0.28
SCARB2-208ENST00000638372 DZIP1Q86YF9 867 aaKnown RBP16.79■□□□□ 0.28
SCARB2-208ENST00000638372 USP16Q9Y5T5 823 aa16.79■□□□□ 0.28
SCARB2-208ENST00000638372 SLC12A7Q9Y666 1083 aa16.79■□□□□ 0.28
SCARB2-208ENST00000638372 CFAP100Q494V2 611 aa16.78■□□□□ 0.28
SCARB2-208ENST00000638372 MICU3Q86XE3 530 aa16.78■□□□□ 0.28
SCARB2-208ENST00000638372 RBM8AQ9Y5S9 174 aaKnown RBP16.78■□□□□ 0.28
SCARB2-208ENST00000638372 DACH1Q9UI36 760 aa16.78■□□□□ 0.28
SCARB2-208ENST00000638372 POLR3DP05423 398 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-208ENST00000638372 OTUD7AQ8TE49 926 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-208ENST00000638372 C19orf44Q9H6X5 657 aa16.78■□□□□ 0.28
SCARB2-208ENST00000638372 STIM1Q13586 685 aa16.77■□□□□ 0.28
SCARB2-208ENST00000638372 CCDC112Q8NEF3 446 aa16.77■□□□□ 0.28
SCARB2-208ENST00000638372 IQSEC3Q9UPP2 1182 aaPredicted RBP16.77■□□□□ 0.28
SCARB2-208ENST00000638372 IQCA1Q86XH1 822 aa16.77■□□□□ 0.28
SCARB2-208ENST00000638372 MSH6P52701 1360 aa16.77■□□□□ 0.27
SCARB2-208ENST00000638372 ATP7AQ04656 1500 aa16.77■□□□□ 0.27
SCARB2-208ENST00000638372 ZFYVE9O95405 1425 aa16.77■□□□□ 0.27
SCARB2-208ENST00000638372 CCDC196A0A1B0GTZ2 297 aa16.76■□□□□ 0.27
SCARB2-208ENST00000638372 TEX35Q5T0J7 233 aa16.76■□□□□ 0.27
SCARB2-208ENST00000638372 GOLGA8AA7E2F4 631 aa16.76■□□□□ 0.27
SCARB2-208ENST00000638372 KLHL10Q6JEL2 608 aa16.76■□□□□ 0.27
SCARB2-208ENST00000638372 ORC3Q9UBD5 711 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-208ENST00000638372 PTPRTO14522 1441 aa16.76■□□□□ 0.27
SCARB2-208ENST00000638372 HSP90B2PQ58FF3 399 aa16.76■□□□□ 0.27
SCARB2-208ENST00000638372 CTCFLQ8NI51 663 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-208ENST00000638372 ACSBG1Q96GR2 724 aa16.76■□□□□ 0.27
SCARB2-208ENST00000638372 ORAI2Q96SN7 254 aa16.76■□□□□ 0.27
SCARB2-208ENST00000638372 MAP3K5Q99683 1374 aa16.76■□□□□ 0.27
SCARB2-208ENST00000638372 SPATA31E1Q6ZUB1 1445 aa16.76■□□□□ 0.27
SCARB2-208ENST00000638372 KLHL40Q2TBA0 621 aa16.75■□□□□ 0.27
SCARB2-208ENST00000638372 IP6K1Q92551 441 aa16.75■□□□□ 0.27
SCARB2-208ENST00000638372 ZNHIT6Q9NWK9 470 aaKnown RBP16.75■□□□□ 0.27
SCARB2-208ENST00000638372 TANGO6Q9C0B7 1094 aa16.75■□□□□ 0.27
SCARB2-208ENST00000638372 FSIP1Q8NA03 581 aa16.75■□□□□ 0.27
SCARB2-208ENST00000638372 DHX8Q14562 1220 aaKnown RBP16.75■□□□□ 0.27
SCARB2-208ENST00000638372 MAST1Q9Y2H9 1570 aa16.74■□□□□ 0.27
SCARB2-208ENST00000638372 SLC4A8Q2Y0W8 1093 aa16.74■□□□□ 0.27
SCARB2-208ENST00000638372 RUFY1Q96T51 708 aa16.74■□□□□ 0.27
SCARB2-208ENST00000638372 PANK2Q9BZ23 570 aa16.74■□□□□ 0.27
SCARB2-208ENST00000638372 PBRM1Q86U86 1689 aa16.74■□□□□ 0.27
SCARB2-208ENST00000638372 BIN1O00499 593 aa16.74■□□□□ 0.27
SCARB2-208ENST00000638372 ZFYVE27Q5T4F4 411 aa16.74■□□□□ 0.27
SCARB2-208ENST00000638372 HMG20BQ9P0W2 317 aa16.74■□□□□ 0.27
SCARB2-208ENST00000638372 CCP110O43303 1012 aa16.73■□□□□ 0.27
SCARB2-208ENST00000638372 ATP2B3Q16720 1220 aa16.73■□□□□ 0.27
SCARB2-208ENST00000638372 MPHOSPH10O00566 681 aaKnown RBP16.73■□□□□ 0.27
SCARB2-208ENST00000638372 TMEM67Q5HYA8 995 aa16.73■□□□□ 0.27
SCARB2-208ENST00000638372 CDC5LQ99459 802 aaKnown RBP16.73■□□□□ 0.27
SCARB2-208ENST00000638372 ANO10Q9NW15 660 aa16.73■□□□□ 0.27
SCARB2-208ENST00000638372 UQCRHLA0A096LP55 91 aa16.73■□□□□ 0.27
SCARB2-208ENST00000638372 CHL1O00533 1208 aa16.73■□□□□ 0.27
SCARB2-208ENST00000638372 UQCRHP07919 91 aa16.73■□□□□ 0.27
SCARB2-208ENST00000638372 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
SCARB2-208ENST00000638372 CBFA2T2O43439 604 aa16.73■□□□□ 0.27
SCARB2-208ENST00000638372 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
SCARB2-208ENST00000638372 LGR6Q9HBX8 967 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms