RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 USP16Q9Y5T5 823 aa24.34■■□□□ 1.49
CTSD-209ENST00000637158 RGL2O15211 777 aa24.33■■□□□ 1.49
CTSD-209ENST00000637158 HTATSF1O43719 755 aaKnown RBP24.33■■□□□ 1.49
CTSD-209ENST00000637158 U2AF1L5P0DN76 240 aaPredicted RBP24.33■■□□□ 1.49
CTSD-209ENST00000637158 U2AF1Q01081 240 aaKnown RBP eCLIP24.33■■□□□ 1.49
CTSD-209ENST00000637158 CCDC24Q8N4L8 307 aa24.33■■□□□ 1.49
CTSD-209ENST00000637158 ZNF219Q9P2Y4 722 aaPredicted RBP24.33■■□□□ 1.49
CTSD-209ENST00000637158 ANKRD31Q8N7Z5 1873 aa24.32■■□□□ 1.48
CTSD-209ENST00000637158 TIAM2Q8IVF5 1701 aa24.32■■□□□ 1.48
CTSD-209ENST00000637158 CCDC88AQ3V6T2 1871 aa24.31■■□□□ 1.48
CTSD-209ENST00000637158 PRPF40BQ6NWY9 871 aaKnown RBP24.31■■□□□ 1.48
CTSD-209ENST00000637158 NBPF5PQ86XG9 351 aaPredicted RBP24.31■■□□□ 1.48
CTSD-209ENST00000637158 POTECB2RU33 542 aa24.3■■□□□ 1.48
CTSD-209ENST00000637158 TPTE2Q6XPS3 522 aa24.29■■□□□ 1.48
CTSD-209ENST00000637158 MCM10Q7L590 875 aa24.29■■□□□ 1.48
CTSD-209ENST00000637158 FER1L6Q2WGJ9 1857 aa24.28■■□□□ 1.48
CTSD-209ENST00000637158 PPP2R1AP30153 589 aa24.28■■□□□ 1.48
CTSD-209ENST00000637158 NPR1P16066 1061 aa24.27■■□□□ 1.48
CTSD-209ENST00000637158 DICER1Q9UPY3 1922 aaKnown RBP24.26■■□□□ 1.47
CTSD-209ENST00000637158 NEFMP07197 916 aa24.26■■□□□ 1.47
CTSD-209ENST00000637158 TAF7Q15545 349 aaPredicted RBP24.26■■□□□ 1.47
CTSD-209ENST00000637158 COL11A2P13942 1736 aaPredicted RBP24.26■■□□□ 1.47
CTSD-209ENST00000637158 BCORQ6W2J9 1755 aa24.26■■□□□ 1.47
CTSD-209ENST00000637158 KLRG2A4D1S0 409 aaPredicted RBP24.25■■□□□ 1.47
CTSD-209ENST00000637158 IQCA1LA6NCM1 817 aa24.25■■□□□ 1.47
CTSD-209ENST00000637158 PIP4K2AP48426 406 aaPredicted RBP24.25■■□□□ 1.47
CTSD-209ENST00000637158 CCDC93Q567U6 631 aa24.25■■□□□ 1.47
CTSD-209ENST00000637158 CHADLQ6NUI6 762 aa24.25■■□□□ 1.47
CTSD-209ENST00000637158 PRAMEF22A3QJZ6 481 aa24.24■■□□□ 1.47
CTSD-209ENST00000637158 COL13A1Q5TAT6 717 aaPredicted RBP24.24■■□□□ 1.47
CTSD-209ENST00000637158 NIP7Q9Y221 180 aaKnown RBP eCLIP24.24■■□□□ 1.474e-13■□□□□ 10.1
CTSD-209ENST00000637158 DDNO94850 711 aaPredicted RBP24.23■■□□□ 1.47
CTSD-209ENST00000637158 C7orf43Q8WVR3 580 aa24.23■■□□□ 1.47
CTSD-209ENST00000637158 SLX4Q8IY92 1834 aa24.22■■□□□ 1.47
CTSD-209ENST00000637158 ALDH1B1P30837 517 aa24.22■■□□□ 1.47
CTSD-209ENST00000637158 RTKN2Q8IZC4 609 aa24.22■■□□□ 1.47
CTSD-209ENST00000637158 PNISRQ8TF01 805 aaKnown RBP24.22■■□□□ 1.47
CTSD-209ENST00000637158 NBPF26B4DH59 902 aa24.21■■□□□ 1.47
CTSD-209ENST00000637158 GTF2E1P29083 439 aaPredicted RBP24.21■■□□□ 1.47
CTSD-209ENST00000637158 DCTN1Q14203 1278 aa24.21■■□□□ 1.47
CTSD-209ENST00000637158 NBPF10Q6P3W6 841 aaKnown RBP24.21■■□□□ 1.47
CTSD-209ENST00000637158 NBPF15Q8N660 670 aa24.21■■□□□ 1.47
CTSD-209ENST00000637158 CREBZFQ9NS37 354 aa24.21■■□□□ 1.47
CTSD-209ENST00000637158 FKBP4Q02790 459 aaKnown RBP eCLIP24.2■■□□□ 1.46
CTSD-209ENST00000637158 ARFGEF2Q9Y6D5 1785 aa24.2■■□□□ 1.46
CTSD-209ENST00000637158 L3MBTL3Q96JM7 780 aaPredicted RBP24.19■■□□□ 1.46
CTSD-209ENST00000637158 HSPA1AP0DMV8 641 aaKnown RBP24.18■■□□□ 1.46
CTSD-209ENST00000637158 HSPA1BP0DMV9 641 aaKnown RBP24.18■■□□□ 1.46
CTSD-209ENST00000637158 TNS4Q8IZW8 715 aa24.18■■□□□ 1.46
CTSD-209ENST00000637158 NYXQ9GZU5 481 aa24.18■■□□□ 1.46
CTSD-209ENST00000637158 LDHDQ86WU2 507 aa24.17■■□□□ 1.46
CTSD-209ENST00000637158 ERVV-1B6SEH8 477 aa24.16■■□□□ 1.46
CTSD-209ENST00000637158 PNNQ9H307 717 aaKnown RBP24.16■■□□□ 1.46
CTSD-209ENST00000637158 FAM177BA6PVY3 158 aa24.15■■□□□ 1.46
CTSD-209ENST00000637158 HLFQ16534 295 aa24.15■■□□□ 1.46
CTSD-209ENST00000637158 TAF1DQ9H5J8 278 aaPredicted RBP24.15■■□□□ 1.46
CTSD-209ENST00000637158 CACNA1SQ13698 1873 aa24.14■■□□□ 1.45
CTSD-209ENST00000637158 MIS18AQ9NYP9 233 aa24.14■■□□□ 1.45
CTSD-209ENST00000637158 POTEIP0CG38 1075 aa24.13■■□□□ 1.45
CTSD-209ENST00000637158 POTEJP0CG39 1038 aa24.13■■□□□ 1.45
CTSD-209ENST00000637158 CC2D2BQ6DHV5 1058 aa24.13■■□□□ 1.45
CTSD-209ENST00000637158 ZNF277Q9NRM2 450 aaPredicted RBP24.13■■□□□ 1.45
CTSD-209ENST00000637158 SCN4AP35499 1836 aa24.12■■□□□ 1.45
CTSD-209ENST00000637158 GRIPAP1Q4V328 841 aa24.12■■□□□ 1.45
CTSD-209ENST00000637158 KIF6Q6ZMV9 814 aa24.12■■□□□ 1.45
CTSD-209ENST00000637158 HACL1Q9UJ83 578 aa24.12■■□□□ 1.45
CTSD-209ENST00000637158 IARSP41252 1262 aaKnown RBP24.11■■□□□ 1.45
CTSD-209ENST00000637158 CRY2Q49AN0 593 aa24.11■■□□□ 1.45
CTSD-209ENST00000637158 PNMA8AQ86V59 439 aaPredicted RBP24.11■■□□□ 1.45
CTSD-209ENST00000637158 MAP3K15Q6ZN16 1313 aa24.1■■□□□ 1.45
CTSD-209ENST00000637158 EIF4A1P60842 406 aaKnown RBP24.1■■□□□ 1.45
CTSD-209ENST00000637158 SYNE4Q8N205 404 aa24.1■■□□□ 1.45
CTSD-209ENST00000637158 NGEFQ8N5V2 710 aa24.1■■□□□ 1.45
CTSD-209ENST00000637158 JDP2Q8WYK2 163 aa24.1■■□□□ 1.45
CTSD-209ENST00000637158 PSMD1Q99460 953 aa24.1■■□□□ 1.45
CTSD-209ENST00000637158 PASKQ96RG2 1323 aa24.1■■□□□ 1.45
CTSD-209ENST00000637158 FZD9O00144 591 aa24.09■■□□□ 1.45
CTSD-209ENST00000637158 MKRN1Q9UHC7 482 aaKnown RBP24.09■■□□□ 1.45
CTSD-209ENST00000637158 RRP7AQ9Y3A4 280 aaKnown RBP24.09■■□□□ 1.45
CTSD-209ENST00000637158 NFE2L2Q16236 605 aa24.08■■□□□ 1.45
CTSD-209ENST00000637158 EAPPQ56P03 285 aaPredicted RBP24.08■■□□□ 1.45
CTSD-209ENST00000637158 GPC2Q8N158 579 aa24.08■■□□□ 1.45
CTSD-209ENST00000637158 RPGRQ92834 1020 aaKnown RBP24.08■■□□□ 1.45
CTSD-209ENST00000637158 PLEKHF1Q96S99 279 aa24.08■■□□□ 1.45
CTSD-209ENST00000637158 LAMB4A4D0S4 1761 aa24.08■■□□□ 1.44
CTSD-209ENST00000637158 ZNF541Q9H0D2 1346 aa24.08■■□□□ 1.44
CTSD-209ENST00000637158 IBTKQ9P2D0 1353 aaPredicted RBP24.07■■□□□ 1.44
CTSD-209ENST00000637158 TMEM88BA6NKF7 163 aa24.07■■□□□ 1.44
CTSD-209ENST00000637158 EPHX2P34913 555 aa24.07■■□□□ 1.44
CTSD-209ENST00000637158 OLFM4Q6UX06 510 aa24.07■■□□□ 1.44
CTSD-209ENST00000637158 CLEC11AQ9Y240 323 aa24.07■■□□□ 1.44
CTSD-209ENST00000637158 ERBB4Q15303 1308 aa24.07■■□□□ 1.44
CTSD-209ENST00000637158 MAPK8IP3Q9UPT6 1336 aa24.07■■□□□ 1.44
CTSD-209ENST00000637158 CNTNAP1P78357 1384 aa24.06■■□□□ 1.44
CTSD-209ENST00000637158 HOXA10P31260 410 aaPredicted RBP24.06■■□□□ 1.44
CTSD-209ENST00000637158 NUTM1Q86Y26 1132 aa24.06■■□□□ 1.44
CTSD-209ENST00000637158 RIC1Q4ADV7 1423 aa24.05■■□□□ 1.44
CTSD-209ENST00000637158 ITGBL1O95965 494 aaPredicted RBP24.05■■□□□ 1.44
CTSD-209ENST00000637158 MYL6BP14649 208 aa24.05■■□□□ 1.44
CTSD-209ENST00000637158 CAPN15O75808 1086 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms