RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 SNRPA1P09661 255 aaKnown RBP25.3■■□□□ 1.64
SMN2-215ENST00000628696 DCTN1Q14203 1278 aa25.3■■□□□ 1.64
SMN2-215ENST00000628696 DPY19L2Q6NUT2 758 aa25.29■■□□□ 1.64
SMN2-215ENST00000628696 CNKSR1Q969H4 720 aa25.29■■□□□ 1.64
SMN2-215ENST00000628696 BCORQ6W2J9 1755 aa25.28■■□□□ 1.64
SMN2-215ENST00000628696 FER1L6Q2WGJ9 1857 aa25.28■■□□□ 1.64
SMN2-215ENST00000628696 ERFEQ4G0M1 354 aa25.28■■□□□ 1.64
SMN2-215ENST00000628696 SLX4Q8IY92 1834 aa25.28■■□□□ 1.64
SMN2-215ENST00000628696 NBPF5PQ86XG9 351 aaPredicted RBP25.27■■□□□ 1.64
SMN2-215ENST00000628696 DICER1Q9UPY3 1922 aaKnown RBP25.27■■□□□ 1.64
SMN2-215ENST00000628696 STYK1Q6J9G0 422 aa25.26■■□□□ 1.63
SMN2-215ENST00000628696 SRGNP10124 158 aa25.25■■□□□ 1.63
SMN2-215ENST00000628696 MASTLQ96GX5 879 aa25.25■■□□□ 1.63
SMN2-215ENST00000628696 TAOK3Q9H2K8 898 aa25.25■■□□□ 1.63
SMN2-215ENST00000628696 ZNF652Q9Y2D9 606 aa25.25■■□□□ 1.63
SMN2-215ENST00000628696 PRPF40BQ6NWY9 871 aaKnown RBP25.24■■□□□ 1.63
SMN2-215ENST00000628696 CLEC4GQ6UXB4 293 aa25.24■■□□□ 1.63
SMN2-215ENST00000628696 HTATSF1O43719 755 aaKnown RBP25.23■■□□□ 1.63
SMN2-215ENST00000628696 MIS18AQ9NYP9 233 aa25.23■■□□□ 1.63
SMN2-215ENST00000628696 FAM177BA6PVY3 158 aa25.22■■□□□ 1.63
SMN2-215ENST00000628696 POTECB2RU33 542 aa25.22■■□□□ 1.63
SMN2-215ENST00000628696 NBPF26B4DH59 902 aa25.22■■□□□ 1.63
SMN2-215ENST00000628696 TAF7Q15545 349 aaPredicted RBP25.22■■□□□ 1.63
SMN2-215ENST00000628696 NBPF10Q6P3W6 841 aaKnown RBP25.22■■□□□ 1.63
SMN2-215ENST00000628696 NBPF15Q8N660 670 aa25.22■■□□□ 1.63
SMN2-215ENST00000628696 JMYQ8N9B5 988 aa25.22■■□□□ 1.63
SMN2-215ENST00000628696 SOGA3Q5TF21 947 aa25.21■■□□□ 1.63
SMN2-215ENST00000628696 NIP7Q9Y221 180 aaKnown RBP eCLIP25.21■■□□□ 1.63
SMN2-215ENST00000628696 LTBP3Q9NS15 1303 aa25.2■■□□□ 1.62
SMN2-215ENST00000628696 NEFMP07197 916 aa25.2■■□□□ 1.62
SMN2-215ENST00000628696 TPTE2Q6XPS3 522 aa25.2■■□□□ 1.62
SMN2-215ENST00000628696 ARFGEF2Q9Y6D5 1785 aa25.19■■□□□ 1.62
SMN2-215ENST00000628696 DDNO94850 711 aaPredicted RBP25.17■■□□□ 1.62
SMN2-215ENST00000628696 NPR1P16066 1061 aa25.17■■□□□ 1.62
SMN2-215ENST00000628696 NGEFQ8N5V2 710 aa25.17■■□□□ 1.62
SMN2-215ENST00000628696 DLG5Q8TDM6 1919 aa25.17■■□□□ 1.62
SMN2-215ENST00000628696 HLFQ16534 295 aa25.16■■□□□ 1.62
SMN2-215ENST00000628696 GTF2E1P29083 439 aaPredicted RBP25.15■■□□□ 1.62
SMN2-215ENST00000628696 CCDC93Q567U6 631 aa25.15■■□□□ 1.62
SMN2-215ENST00000628696 C7orf43Q8WVR3 580 aa25.14■■□□□ 1.62
SMN2-215ENST00000628696 PNISRQ8TF01 805 aaKnown RBP25.13■■□□□ 1.61
SMN2-215ENST00000628696 KLRG2A4D1S0 409 aaPredicted RBP25.12■■□□□ 1.61
SMN2-215ENST00000628696 RGL2O15211 777 aa25.12■■□□□ 1.61
SMN2-215ENST00000628696 RRP7AQ9Y3A4 280 aaKnown RBP25.12■■□□□ 1.61
SMN2-215ENST00000628696 LAMB4A4D0S4 1761 aa25.12■■□□□ 1.61
SMN2-215ENST00000628696 COL13A1Q5TAT6 717 aaPredicted RBP25.11■■□□□ 1.61
SMN2-215ENST00000628696 CHADLQ6NUI6 762 aa25.11■■□□□ 1.61
SMN2-215ENST00000628696 OLFM4Q6UX06 510 aa25.11■■□□□ 1.61
SMN2-215ENST00000628696 ZNF277Q9NRM2 450 aaPredicted RBP25.11■■□□□ 1.61
SMN2-215ENST00000628696 POTEIP0CG38 1075 aa25.1■■□□□ 1.61
SMN2-215ENST00000628696 POTEJP0CG39 1038 aa25.1■■□□□ 1.61
SMN2-215ENST00000628696 FKBP4Q02790 459 aaKnown RBP eCLIP25.1■■□□□ 1.61
SMN2-215ENST00000628696 THUMPD2Q9BTF0 503 aaKnown RBP25.1■■□□□ 1.61
SMN2-215ENST00000628696 KDM3BQ7LBC6 1761 aa25.09■■□□□ 1.61
SMN2-215ENST00000628696 ALDH1B1P30837 517 aa25.09■■□□□ 1.61
SMN2-215ENST00000628696 NUP98P52948 1817 aa25.09■■□□□ 1.61
SMN2-215ENST00000628696 EIF4A1P60842 406 aaKnown RBP25.08■■□□□ 1.61
SMN2-215ENST00000628696 NFE2L2Q16236 605 aa25.08■■□□□ 1.61
SMN2-215ENST00000628696 KIF6Q6ZMV9 814 aa25.08■■□□□ 1.61
SMN2-215ENST00000628696 RTKN2Q8IZC4 609 aa25.08■■□□□ 1.61
SMN2-215ENST00000628696 PLEKHF1Q96S99 279 aa25.08■■□□□ 1.61
SMN2-215ENST00000628696 IQCA1LA6NCM1 817 aa25.07■■□□□ 1.6
SMN2-215ENST00000628696 MYL6BP14649 208 aa25.07■■□□□ 1.6
SMN2-215ENST00000628696 TTLL7Q6ZT98 887 aa25.07■■□□□ 1.6
SMN2-215ENST00000628696 NUTM1Q86Y26 1132 aa25.07■■□□□ 1.6
SMN2-215ENST00000628696 NYXQ9GZU5 481 aa25.07■■□□□ 1.6
SMN2-215ENST00000628696 MAPK8IP3Q9UPT6 1336 aa25.07■■□□□ 1.6
SMN2-215ENST00000628696 ERVV-1B6SEH8 477 aa25.06■■□□□ 1.6
SMN2-215ENST00000628696 MAP3K15Q6ZN16 1313 aa25.06■■□□□ 1.6
SMN2-215ENST00000628696 HSPA1AP0DMV8 641 aaKnown RBP25.05■■□□□ 1.6
SMN2-215ENST00000628696 HSPA1BP0DMV9 641 aaKnown RBP25.05■■□□□ 1.6
SMN2-215ENST00000628696 SYNE4Q8N205 404 aa25.05■■□□□ 1.6
SMN2-215ENST00000628696 PNNQ9H307 717 aaKnown RBP25.05■■□□□ 1.6
SMN2-215ENST00000628696 SCN4AP35499 1836 aa25.05■■□□□ 1.6
SMN2-215ENST00000628696 GPTP24298 496 aa25.04■■□□□ 1.6
SMN2-215ENST00000628696 ZBTB3Q9H5J0 574 aa25.04■■□□□ 1.6
SMN2-215ENST00000628696 TAF1DQ9H5J8 278 aaPredicted RBP25.04■■□□□ 1.6
SMN2-215ENST00000628696 ZNF541Q9H0D2 1346 aa25.04■■□□□ 1.6
SMN2-215ENST00000628696 L3MBTL3Q96JM7 780 aaPredicted RBP25.03■■□□□ 1.6
SMN2-215ENST00000628696 CREBZFQ9NS37 354 aa25.03■■□□□ 1.6
SMN2-215ENST00000628696 MKRN1Q9UHC7 482 aaKnown RBP25.03■■□□□ 1.6
SMN2-215ENST00000628696 PCNTO95613 3336 aa25.03■■□□□ 1.6
SMN2-215ENST00000628696 ABCC12Q96J65 1359 aa25.03■■□□□ 1.6
SMN2-215ENST00000628696 IARSP41252 1262 aaKnown RBP25.02■■□□□ 1.6
SMN2-215ENST00000628696 EAPPQ56P03 285 aaPredicted RBP25.02■■□□□ 1.6
SMN2-215ENST00000628696 LDHDQ86WU2 507 aa25.02■■□□□ 1.6
SMN2-215ENST00000628696 TNS4Q8IZW8 715 aa25.01■■□□□ 1.59
SMN2-215ENST00000628696 RPGRQ92834 1020 aaKnown RBP25.01■■□□□ 1.59
SMN2-215ENST00000628696 CLEC11AQ9Y240 323 aa25.01■■□□□ 1.59
SMN2-215ENST00000628696 CRY2Q49AN0 593 aa25■■□□□ 1.59
SMN2-215ENST00000628696 SUSD4Q5VX71 490 aa25■■□□□ 1.59
SMN2-215ENST00000628696 HACL1Q9UJ83 578 aa25■■□□□ 1.59
SMN2-215ENST00000628696 CAPN15O75808 1086 aa24.99■■□□□ 1.59
SMN2-215ENST00000628696 TSPYL4Q9UJ04 414 aa24.99■■□□□ 1.59
SMN2-215ENST00000628696 UBN2Q6ZU65 1347 aa24.98■■□□□ 1.59
SMN2-215ENST00000628696 JDP2Q8WYK2 163 aa24.98■■□□□ 1.59
SMN2-215ENST00000628696 TCERG1O14776 1098 aaKnown RBP24.97■■□□□ 1.59
SMN2-215ENST00000628696 EIF2S2P20042 333 aaKnown RBP24.97■■□□□ 1.59
SMN2-215ENST00000628696 EPHX2P34913 555 aa24.97■■□□□ 1.59
SMN2-215ENST00000628696 CC2D2BQ6DHV5 1058 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms