RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, human

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM4-208	ENST00000626716	ZNF652	Q9Y2D9	606 aa		33.57	■■■□□ 2.96
R3HDM4-208	ENST00000626716	STYK1	Q6J9G0	422 aa		33.56	■■■□□ 2.96
R3HDM4-208	ENST00000626716	SMC1B	Q8NDV3	1235 aa		33.56	■■■□□ 2.96
R3HDM4-208	ENST00000626716	WDR90	Q96KV7	1748 aa		33.56	■■■□□ 2.96
R3HDM4-208	ENST00000626716	SRGN	P10124	158 aa		33.55	■■■□□ 2.96
R3HDM4-208	ENST00000626716	COL11A2	P13942	1736 aa	Predicted RBP	33.55	■■■□□ 2.96
R3HDM4-208	ENST00000626716	NEFM	P07197	916 aa		33.54	■■■□□ 2.96
R3HDM4-208	ENST00000626716	NBPF5P	Q86XG9	351 aa	Predicted RBP	33.54	■■■□□ 2.96
R3HDM4-208	ENST00000626716	MASTL	Q96GX5	879 aa		33.54	■■■□□ 2.96
R3HDM4-208	ENST00000626716	FER1L6	Q2WGJ9	1857 aa		33.54	■■■□□ 2.96
R3HDM4-208	ENST00000626716	NBPF26	B4DH59	902 aa		33.53	■■■□□ 2.96
R3HDM4-208	ENST00000626716	DPY19L2	Q6NUT2	758 aa		33.53	■■■□□ 2.96
R3HDM4-208	ENST00000626716	NBPF10	Q6P3W6	841 aa	Known RBP	33.53	■■■□□ 2.96
R3HDM4-208	ENST00000626716	NBPF15	Q8N660	670 aa		33.53	■■■□□ 2.96
R3HDM4-208	ENST00000626716	HTRA3	P83110	453 aa		33.52	■■■□□ 2.96
R3HDM4-208	ENST00000626716	MIS18A	Q9NYP9	233 aa		33.52	■■■□□ 2.96
R3HDM4-208	ENST00000626716	TIAM2	Q8IVF5	1701 aa		33.52	■■■□□ 2.96
R3HDM4-208	ENST00000626716	SLX4	Q8IY92	1834 aa		33.51	■■■□□ 2.96
R3HDM4-208	ENST00000626716	RGL2	O15211	777 aa		33.51	■■■□□ 2.95
R3HDM4-208	ENST00000626716	ERFE	Q4G0M1	354 aa		33.51	■■■□□ 2.95
R3HDM4-208	ENST00000626716	DICER1	Q9UPY3	1922 aa	Known RBP	33.51	■■■□□ 2.95
R3HDM4-208	ENST00000626716	PRPF40B	Q6NWY9	871 aa	Known RBP	33.5	■■■□□ 2.95
R3HDM4-208	ENST00000626716	LTBP3	Q9NS15	1303 aa		33.5	■■■□□ 2.95
R3HDM4-208	ENST00000626716	TPTE2	Q6XPS3	522 aa		33.49	■■■□□ 2.95
R3HDM4-208	ENST00000626716	TAOK3	Q9H2K8	898 aa		33.49	■■■□□ 2.95
R3HDM4-208	ENST00000626716	SOGA3	Q5TF21	947 aa		33.48	■■■□□ 2.95
R3HDM4-208	ENST00000626716	KLRG1	Q96E93	195 aa		33.48	■■■□□ 2.95
R3HDM4-208	ENST00000626716	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.48	■■■□□ 2.95
R3HDM4-208	ENST00000626716	PNISR	Q8TF01	805 aa	Known RBP	33.47	■■■□□ 2.95
R3HDM4-208	ENST00000626716	CACNA1S	Q13698	1873 aa		33.46	■■■□□ 2.95
R3HDM4-208	ENST00000626716	DLG5	Q8TDM6	1919 aa		33.46	■■■□□ 2.95
R3HDM4-208	ENST00000626716	PLEKHF1	Q96S99	279 aa		33.46	■■■□□ 2.95
R3HDM4-208	ENST00000626716	POTEC	B2RU33	542 aa		33.45	■■■□□ 2.95
R3HDM4-208	ENST00000626716	KLRG2	A4D1S0	409 aa	Predicted RBP	33.44	■■■□□ 2.94
R3HDM4-208	ENST00000626716	NPR1	P16066	1061 aa		33.44	■■■□□ 2.94
R3HDM4-208	ENST00000626716	ARFGEF2	Q9Y6D5	1785 aa		33.43	■■■□□ 2.94
R3HDM4-208	ENST00000626716	HLF	Q16534	295 aa		33.43	■■■□□ 2.94
R3HDM4-208	ENST00000626716	C7orf43	Q8WVR3	580 aa		33.43	■■■□□ 2.94
R3HDM4-208	ENST00000626716	NFE2L2	Q16236	605 aa		33.42	■■■□□ 2.94
R3HDM4-208	ENST00000626716	PNN	Q9H307	717 aa	Known RBP	33.42	■■■□□ 2.94
R3HDM4-208	ENST00000626716	JMY	Q8N9B5	988 aa		33.41	■■■□□ 2.94
R3HDM4-208	ENST00000626716	FAM177B	A6PVY3	158 aa		33.4	■■■□□ 2.94
R3HDM4-208	ENST00000626716	EIF4A1	P60842	406 aa	Known RBP	33.39	■■■□□ 2.94
R3HDM4-208	ENST00000626716	NGEF	Q8N5V2	710 aa		33.39	■■■□□ 2.94
R3HDM4-208	ENST00000626716	GTF2E1	P29083	439 aa	Predicted RBP	33.38	■■■□□ 2.93
R3HDM4-208	ENST00000626716	CCDC93	Q567U6	631 aa		33.38	■■■□□ 2.93
R3HDM4-208	ENST00000626716	LAMB4	A4D0S4	1761 aa		33.38	■■■□□ 2.93
R3HDM4-208	ENST00000626716	ERVV-1	B6SEH8	477 aa		33.37	■■■□□ 2.93
R3HDM4-208	ENST00000626716	THUMPD2	Q9BTF0	503 aa	Known RBP	33.37	■■■□□ 2.93
R3HDM4-208	ENST00000626716	KDM3B	Q7LBC6	1761 aa		33.37	■■■□□ 2.93
R3HDM4-208	ENST00000626716	RRP7A	Q9Y3A4	280 aa	Known RBP	33.36	■■■□□ 2.93
R3HDM4-208	ENST00000626716	PCNT	O95613	3336 aa		33.35	■■■□□ 2.93
R3HDM4-208	ENST00000626716	DDN	O94850	711 aa	Predicted RBP	33.35	■■■□□ 2.93
R3HDM4-208	ENST00000626716	MAPK8IP3	Q9UPT6	1336 aa		33.34	■■■□□ 2.93
R3HDM4-208	ENST00000626716	ALDH1B1	P30837	517 aa		33.34	■■■□□ 2.93
R3HDM4-208	ENST00000626716	NUP98	P52948	1817 aa		33.32	■■■□□ 2.93
R3HDM4-208	ENST00000626716	MAP3K15	Q6ZN16	1313 aa		33.32	■■■□□ 2.93
R3HDM4-208	ENST00000626716	NYX	Q9GZU5	481 aa		33.32	■■■□□ 2.92
R3HDM4-208	ENST00000626716	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.31	■■■□□ 2.92
R3HDM4-208	ENST00000626716	KIF6	Q6ZMV9	814 aa		33.31	■■■□□ 2.92
R3HDM4-208	ENST00000626716	RTKN2	Q8IZC4	609 aa		33.31	■■■□□ 2.92
R3HDM4-208	ENST00000626716	MYL6B	P14649	208 aa		33.3	■■■□□ 2.92
R3HDM4-208	ENST00000626716	TTLL7	Q6ZT98	887 aa		33.3	■■■□□ 2.92
R3HDM4-208	ENST00000626716	OLFM4	Q6UX06	510 aa		33.29	■■■□□ 2.92
R3HDM4-208	ENST00000626716	CHADL	Q6NUI6	762 aa		33.28	■■■□□ 2.92
R3HDM4-208	ENST00000626716	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.28	■■■□□ 2.92
R3HDM4-208	ENST00000626716	NUTM1	Q86Y26	1132 aa		33.27	■■■□□ 2.92
R3HDM4-208	ENST00000626716	CRY2	Q49AN0	593 aa		33.26	■■■□□ 2.91
R3HDM4-208	ENST00000626716	IQCA1L	A6NCM1	817 aa		33.25	■■■□□ 2.91
R3HDM4-208	ENST00000626716	RALBP1	Q15311	655 aa		33.25	■■■□□ 2.91
R3HDM4-208	ENST00000626716	L3MBTL3	Q96JM7	780 aa	Predicted RBP	33.25	■■■□□ 2.91
R3HDM4-208	ENST00000626716	ZBTB3	Q9H5J0	574 aa		33.25	■■■□□ 2.91
R3HDM4-208	ENST00000626716	TSPYL4	Q9UJ04	414 aa		33.25	■■■□□ 2.91
R3HDM4-208	ENST00000626716	GPT	P24298	496 aa		33.24	■■■□□ 2.91
R3HDM4-208	ENST00000626716	RIPK4	P57078	832 aa		33.24	■■■□□ 2.91
R3HDM4-208	ENST00000626716	ERBB4	Q15303	1308 aa		33.24	■■■□□ 2.91
R3HDM4-208	ENST00000626716	POTEI	P0CG38	1075 aa		33.23	■■■□□ 2.91
R3HDM4-208	ENST00000626716	POTEJ	P0CG39	1038 aa		33.23	■■■□□ 2.91
R3HDM4-208	ENST00000626716	SYNE4	Q8N205	404 aa		33.23	■■■□□ 2.91
R3HDM4-208	ENST00000626716	ABCC12	Q96J65	1359 aa		33.22	■■■□□ 2.91
R3HDM4-208	ENST00000626716	SCN4A	P35499	1836 aa		33.21	■■■□□ 2.91
R3HDM4-208	ENST00000626716	SUSD4	Q5VX71	490 aa		33.21	■■■□□ 2.91
R3HDM4-208	ENST00000626716	ZNF34	Q8IZ26	560 aa		33.21	■■■□□ 2.91
R3HDM4-208	ENST00000626716	UBN2	Q6ZU65	1347 aa		33.21	■■■□□ 2.91
R3HDM4-208	ENST00000626716	IARS	P41252	1262 aa	Known RBP	33.2	■■■□□ 2.91
R3HDM4-208	ENST00000626716	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.2	■■■□□ 2.91
R3HDM4-208	ENST00000626716	RPGR	Q92834	1020 aa	Known RBP	33.2	■■■□□ 2.91
R3HDM4-208	ENST00000626716	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.2	■■■□□ 2.91
R3HDM4-208	ENST00000626716	BABAM1	Q9NWV8	329 aa		33.2	■■■□□ 2.91
R3HDM4-208	ENST00000626716	IBTK	Q9P2D0	1353 aa	Predicted RBP	33.2	■■■□□ 2.9
R3HDM4-208	ENST00000626716	HOXA10	P31260	410 aa	Predicted RBP	33.19	■■■□□ 2.9
R3HDM4-208	ENST00000626716	CC2D2B	Q6DHV5	1058 aa		33.19	■■■□□ 2.9
R3HDM4-208	ENST00000626716	EIF2S2	P20042	333 aa	Known RBP	33.18	■■■□□ 2.9
R3HDM4-208	ENST00000626716	LDHD	Q86WU2	507 aa		33.18	■■■□□ 2.9
R3HDM4-208	ENST00000626716	PSMD1	Q99460	953 aa		33.18	■■■□□ 2.9
R3HDM4-208	ENST00000626716	ZNF541	Q9H0D2	1346 aa		33.18	■■■□□ 2.9
R3HDM4-208	ENST00000626716	FZD9	O00144	591 aa		33.17	■■■□□ 2.9
R3HDM4-208	ENST00000626716	TMPO	P42166	694 aa	Known RBP	33.17	■■■□□ 2.9
R3HDM4-208	ENST00000626716	CREBZF	Q9NS37	354 aa		33.17	■■■□□ 2.9
R3HDM4-208	ENST00000626716	RIC1	Q4ADV7	1423 aa		33.17	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms