RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 NEURL1BA8MQ27 555 aa24.12■■□□□ 1.45
PCDHB11-202ENST00000624887 ANKRD13DQ6ZTN6 518 aa24.12■■□□□ 1.45
PCDHB11-202ENST00000624887 CIZ1Q9ULV3 898 aaPredicted RBP24.12■■□□□ 1.45
PCDHB11-202ENST00000624887 USP42Q9H9J4 1324 aaKnown RBP24.12■■□□□ 1.45
PCDHB11-202ENST00000624887 GSE1Q14687 1217 aa24.12■■□□□ 1.45
PCDHB11-202ENST00000624887 UNC5CLQ8IV45 518 aa24.12■■□□□ 1.45
PCDHB11-202ENST00000624887 SHANK3Q9BYB0 1731 aa24.12■■□□□ 1.45
PCDHB11-202ENST00000624887 OS9Q13438 667 aaPredicted RBP24.11■■□□□ 1.45
PCDHB11-202ENST00000624887 ERC1Q8IUD2 1116 aa24.11■■□□□ 1.45
PCDHB11-202ENST00000624887 BICC1Q9H694 974 aaKnown RBP24.11■■□□□ 1.45
PCDHB11-202ENST00000624887 UBR2Q8IWV8 1755 aa24.11■■□□□ 1.45
PCDHB11-202ENST00000624887 GCKRQ14397 625 aa24.11■■□□□ 1.45
PCDHB11-202ENST00000624887 EVA1CP58658 441 aa24.1■■□□□ 1.45
PCDHB11-202ENST00000624887 PIP4K2BP78356 416 aa24.1■■□□□ 1.45
PCDHB11-202ENST00000624887 MYD88Q99836 296 aa24.1■■□□□ 1.45
PCDHB11-202ENST00000624887 ERBB4Q15303 1308 aa24.1■■□□□ 1.45
PCDHB11-202ENST00000624887 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
PCDHB11-202ENST00000624887 COL16A1Q07092 1604 aaPredicted RBP24.1■■□□□ 1.45
PCDHB11-202ENST00000624887 AK9Q5TCS8 1911 aa24.09■■□□□ 1.45
PCDHB11-202ENST00000624887 CLASRPQ8N2M8 674 aaKnown RBP24.09■■□□□ 1.45
PCDHB11-202ENST00000624887 STRN4Q9NRL3 753 aa24.09■■□□□ 1.45
PCDHB11-202ENST00000624887 TTC41PQ6P2S7 1318 aa24.09■■□□□ 1.45
PCDHB11-202ENST00000624887 PAPPAQ13219 1627 aa24.09■■□□□ 1.45
PCDHB11-202ENST00000624887 HSP90AA1P07900 732 aaKnown RBP24.08■■□□□ 1.45
PCDHB11-202ENST00000624887 AEBP2Q6ZN18 517 aaPredicted RBP24.08■■□□□ 1.45
PCDHB11-202ENST00000624887 PA2G4Q9UQ80 394 aaKnown RBP24.08■■□□□ 1.45
PCDHB11-202ENST00000624887 ARFGEF2Q9Y6D5 1785 aa24.08■■□□□ 1.44
PCDHB11-202ENST00000624887 PIP4K2AP48426 406 aaPredicted RBP24.07■■□□□ 1.44
PCDHB11-202ENST00000624887 MCM4P33991 863 aa24.06■■□□□ 1.44
PCDHB11-202ENST00000624887 KCPQ6ZWJ8 1503 aa24.06■■□□□ 1.44
PCDHB11-202ENST00000624887 UBAP1LF5GYI3 381 aa24.05■■□□□ 1.44
PCDHB11-202ENST00000624887 EPB41L2O43491 1005 aaKnown RBP24.05■■□□□ 1.44
PCDHB11-202ENST00000624887 ST18O60284 1047 aa24.05■■□□□ 1.44
PCDHB11-202ENST00000624887 BTG4Q9NY30 223 aa24.05■■□□□ 1.44
PCDHB11-202ENST00000624887 AFDNP55196 1824 aaKnown RBP24.05■■□□□ 1.44
PCDHB11-202ENST00000624887 GLRX3O76003 335 aaKnown RBP24.05■■□□□ 1.44
PCDHB11-202ENST00000624887 CNTROBQ8N137 903 aa24.05■■□□□ 1.44
PCDHB11-202ENST00000624887 PLBD2Q8NHP8 589 aa24.05■■□□□ 1.44
PCDHB11-202ENST00000624887 DDX54Q8TDD1 881 aaKnown RBP24.05■■□□□ 1.44
PCDHB11-202ENST00000624887 COL15A1P39059 1388 aa24.04■■□□□ 1.44
PCDHB11-202ENST00000624887 COL14A1Q05707 1796 aaKnown RBP24.04■■□□□ 1.44
PCDHB11-202ENST00000624887 MCCP23508 829 aa24.03■■□□□ 1.44
PCDHB11-202ENST00000624887 ANO2Q9NQ90 1003 aa24.03■■□□□ 1.44
PCDHB11-202ENST00000624887 TNS2Q63HR2 1409 aa24.03■■□□□ 1.44
PCDHB11-202ENST00000624887 G3BP1Q13283 466 aaKnown RBP eCLIP24.03■■□□□ 1.44
PCDHB11-202ENST00000624887 NBPF26B4DH59 902 aa24.02■■□□□ 1.44
PCDHB11-202ENST00000624887 MAP4K4O95819 1239 aaPredicted RBP24.02■■□□□ 1.44
PCDHB11-202ENST00000624887 ANAPC15P60006 121 aa24.02■■□□□ 1.44
PCDHB11-202ENST00000624887 NBPF14Q5TI25 921 aa24.02■■□□□ 1.44
PCDHB11-202ENST00000624887 NBPF10Q6P3W6 841 aaKnown RBP24.02■■□□□ 1.44
PCDHB11-202ENST00000624887 NBPF15Q8N660 670 aa24.02■■□□□ 1.44
PCDHB11-202ENST00000624887 GPATCH3Q96I76 525 aa24.02■■□□□ 1.44
PCDHB11-202ENST00000624887 ECHDC1Q9NTX5 307 aa24.02■■□□□ 1.44
PCDHB11-202ENST00000624887 SASH1O94885 1247 aa24.02■■□□□ 1.43
PCDHB11-202ENST00000624887 IFIT2P09913 472 aaKnown RBP24.02■■□□□ 1.43
PCDHB11-202ENST00000624887 RAB3GAP1Q15042 981 aa24.02■■□□□ 1.43
PCDHB11-202ENST00000624887 IL17RAQ96F46 866 aa24.02■■□□□ 1.43
PCDHB11-202ENST00000624887 EPHA10Q5JZY3 1008 aa24.01■■□□□ 1.43
PCDHB11-202ENST00000624887 FOXD4L1Q9NU39 408 aa24■■□□□ 1.43
PCDHB11-202ENST00000624887 TOGARAM1Q9Y4F4 1720 aa24■■□□□ 1.43
PCDHB11-202ENST00000624887 AACSQ86V21 672 aa23.99■■□□□ 1.43
PCDHB11-202ENST00000624887 IL25Q9H293 177 aa23.99■■□□□ 1.43
PCDHB11-202ENST00000624887 SGSM2O43147 1006 aa23.98■■□□□ 1.43
PCDHB11-202ENST00000624887 RABL6Q3YEC7 729 aaPredicted RBP23.98■■□□□ 1.43
PCDHB11-202ENST00000624887 TNPO1Q92973 898 aaKnown RBP23.98■■□□□ 1.43
PCDHB11-202ENST00000624887 NUP188Q5SRE5 1749 aa23.97■■□□□ 1.43
PCDHB11-202ENST00000624887 ATP5J2-PTCD1G3V325 749 aa23.97■■□□□ 1.43
PCDHB11-202ENST00000624887 PTCD1O75127 700 aaKnown RBP23.97■■□□□ 1.43
PCDHB11-202ENST00000624887 UBE3BQ7Z3V4 1068 aa23.97■■□□□ 1.43
PCDHB11-202ENST00000624887 EAF2Q96CJ1 260 aaPredicted RBP23.97■■□□□ 1.43
PCDHB11-202ENST00000624887 COPRSQ9NQ92 184 aa23.97■■□□□ 1.43
PCDHB11-202ENST00000624887 PALD1Q9ULE6 856 aa23.97■■□□□ 1.43
PCDHB11-202ENST00000624887 A0A087WZG4 1122 aa23.96■■□□□ 1.43
PCDHB11-202ENST00000624887 CASP7P55210 303 aa23.96■■□□□ 1.43
PCDHB11-202ENST00000624887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.96■■□□□ 1.43
PCDHB11-202ENST00000624887 A1BGP04217 495 aa23.96■■□□□ 1.43
PCDHB11-202ENST00000624887 SIL1Q9H173 461 aa23.96■■□□□ 1.43
PCDHB11-202ENST00000624887 DDX11L8A8MPP1 907 aa23.95■■□□□ 1.42
PCDHB11-202ENST00000624887 ADAMTS2O95450 1211 aa23.95■■□□□ 1.42
PCDHB11-202ENST00000624887 RFX5P48382 616 aaPredicted RBP23.95■■□□□ 1.42
PCDHB11-202ENST00000624887 TMOD3Q9NYL9 352 aa23.95■■□□□ 1.42
PCDHB11-202ENST00000624887 HSPA4P34932 840 aa23.94■■□□□ 1.42
PCDHB11-202ENST00000624887 MCM2P49736 904 aa23.94■■□□□ 1.42
PCDHB11-202ENST00000624887 NEK4P51957 841 aa23.94■■□□□ 1.42
PCDHB11-202ENST00000624887 TTLL7Q6ZT98 887 aa23.94■■□□□ 1.42
PCDHB11-202ENST00000624887 KLHDC4Q8TBB5 520 aa23.94■■□□□ 1.42
PCDHB11-202ENST00000624887 JARID2Q92833 1246 aaPredicted RBP23.94■■□□□ 1.42
PCDHB11-202ENST00000624887 RAD50Q92878 1312 aa23.94■■□□□ 1.42
PCDHB11-202ENST00000624887 GBP4Q96PP9 640 aa23.93■■□□□ 1.42
PCDHB11-202ENST00000624887 DISP2A7MBM2 1401 aa23.92■■□□□ 1.42
PCDHB11-202ENST00000624887 H7C1W4 665 aa23.92■■□□□ 1.42
PCDHB11-202ENST00000624887 PTPN12Q05209 780 aaKnown RBP23.92■■□□□ 1.42
PCDHB11-202ENST00000624887 IL27Q8NEV9 243 aa23.92■■□□□ 1.42
PCDHB11-202ENST00000624887 EVI5LQ96CN4 794 aa23.92■■□□□ 1.42
PCDHB11-202ENST00000624887 CWC22Q9HCG8 908 aaKnown RBP23.92■■□□□ 1.42
PCDHB11-202ENST00000624887 CERKQ8TCT0 537 aa23.92■■□□□ 1.42
PCDHB11-202ENST00000624887 LSG1Q9H089 658 aaKnown RBP23.92■■□□□ 1.42
PCDHB11-202ENST00000624887 CCDC8Q9H0W5 538 aaPredicted RBP23.92■■□□□ 1.42
PCDHB11-202ENST00000624887 NUTM2BA6NNL0 878 aaPredicted RBP23.91■■□□□ 1.42
PCDHB11-202ENST00000624887 NUTM2EB1AL46 878 aaPredicted RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms