RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 KDM6BO15054 1643 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 NUP160Q12769 1436 aa17.27■□□□□ 0.36
C9orf139-202ENST00000623196 POTEB2H3BUK9 544 aa17.27■□□□□ 0.36
C9orf139-202ENST00000623196 DYNC1I1O14576 645 aa17.27■□□□□ 0.36
C9orf139-202ENST00000623196 MICALCLQ6ZW33 695 aa17.27■□□□□ 0.36
C9orf139-202ENST00000623196 C16orf71Q8IYS4 520 aaPredicted RBP17.27■□□□□ 0.36
C9orf139-202ENST00000623196 YEATS4O95619 227 aa17.27■□□□□ 0.35
C9orf139-202ENST00000623196 SPECC1Q5M775 1068 aa17.27■□□□□ 0.35
C9orf139-202ENST00000623196 FSIP1Q8NA03 581 aa17.27■□□□□ 0.35
C9orf139-202ENST00000623196 PRIMPOLQ96LW4 560 aa17.27■□□□□ 0.35
C9orf139-202ENST00000623196 GOLGA6L9A6NEM1 432 aa17.27■□□□□ 0.35
C9orf139-202ENST00000623196 GTF2F1P35269 517 aaKnown RBP eCLIP17.27■□□□□ 0.35
C9orf139-202ENST00000623196 USP5P45974 858 aa17.27■□□□□ 0.35
C9orf139-202ENST00000623196 CNNM3Q8NE01 707 aa17.27■□□□□ 0.35
C9orf139-202ENST00000623196 POLR3AO14802 1390 aaPredicted RBP17.26■□□□□ 0.35
C9orf139-202ENST00000623196 FGFR1OPO95684 399 aaKnown RBP17.26■□□□□ 0.35
C9orf139-202ENST00000623196 GUCY1B3Q02153 619 aa17.26■□□□□ 0.35
C9orf139-202ENST00000623196 UVSSAQ2YD98 709 aa17.26■□□□□ 0.35
C9orf139-202ENST00000623196 LARP1Q6PKG0 1096 aaKnown RBP17.26■□□□□ 0.35
C9orf139-202ENST00000623196 TTC22Q5TAA0 569 aa17.26■□□□□ 0.35
C9orf139-202ENST00000623196 IGHMBP2P38935 993 aaKnown RBP17.26■□□□□ 0.35
C9orf139-202ENST00000623196 SMC1AQ14683 1233 aaKnown RBP17.26■□□□□ 0.35
C9orf139-202ENST00000623196 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
C9orf139-202ENST00000623196 CPLX3Q8WVH0 158 aa17.26■□□□□ 0.35
C9orf139-202ENST00000623196 NUP88Q99567 741 aaPredicted RBP17.26■□□□□ 0.35
C9orf139-202ENST00000623196 A2MP01023 1474 aa17.26■□□□□ 0.35
C9orf139-202ENST00000623196 GSTTP1A0A1W2PQM5 241 aa17.25■□□□□ 0.35
C9orf139-202ENST00000623196 BMS1Q14692 1282 aaKnown RBP17.25■□□□□ 0.35
C9orf139-202ENST00000623196 CCDC85AQ96PX6 553 aaPredicted RBP17.25■□□□□ 0.35
C9orf139-202ENST00000623196 TSG101Q99816 390 aa17.25■□□□□ 0.35
C9orf139-202ENST00000623196 NAPBQ9H115 298 aa17.25■□□□□ 0.35
C9orf139-202ENST00000623196 ZNF287Q9HBT7 754 aa17.25■□□□□ 0.35
C9orf139-202ENST00000623196 PIK3C2GO75747 1445 aa17.25■□□□□ 0.35
C9orf139-202ENST00000623196 STX6O43752 255 aa17.25■□□□□ 0.35
C9orf139-202ENST00000623196 IFIT1P09914 478 aaKnown RBP17.25■□□□□ 0.35
C9orf139-202ENST00000623196 PPP4R3BQ5MIZ7 849 aa17.25■□□□□ 0.35
C9orf139-202ENST00000623196 ZSCAN29Q8IWY8 852 aaPredicted RBP17.25■□□□□ 0.35
C9orf139-202ENST00000623196 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
C9orf139-202ENST00000623196 TRERF1Q96PN7 1200 aa17.25■□□□□ 0.35
C9orf139-202ENST00000623196 TFIP11Q9UBB9 837 aaKnown RBP17.25■□□□□ 0.35
C9orf139-202ENST00000623196 CTCFLQ8NI51 663 aaPredicted RBP17.25■□□□□ 0.35
C9orf139-202ENST00000623196 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.25■□□□□ 0.35
C9orf139-202ENST00000623196 STX1AQ16623 288 aa17.24■□□□□ 0.35
C9orf139-202ENST00000623196 TMC6Q7Z403 805 aa17.24■□□□□ 0.35
C9orf139-202ENST00000623196 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
C9orf139-202ENST00000623196 FANCAO15360 1455 aa17.24■□□□□ 0.35
C9orf139-202ENST00000623196 NSD2O96028 1365 aa17.24■□□□□ 0.35
C9orf139-202ENST00000623196 SNW1Q13573 536 aaKnown RBP17.24■□□□□ 0.35
C9orf139-202ENST00000623196 RNF187Q5TA31 235 aaPredicted RBP17.24■□□□□ 0.35
C9orf139-202ENST00000623196 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
C9orf139-202ENST00000623196 NAA15Q9BXJ9 866 aaKnown RBP17.24■□□□□ 0.35
C9orf139-202ENST00000623196 RAB34Q9BZG1 259 aa17.24■□□□□ 0.35
C9orf139-202ENST00000623196 TDRD12Q587J7 1177 aaKnown RBP17.23■□□□□ 0.35
C9orf139-202ENST00000623196 TRAPPC8Q9Y2L5 1435 aa17.23■□□□□ 0.35
C9orf139-202ENST00000623196 IL16Q14005 1332 aa17.23■□□□□ 0.35
C9orf139-202ENST00000623196 CCDC175P0C221 793 aa17.23■□□□□ 0.35
C9orf139-202ENST00000623196 ZMYM4Q5VZL5 1548 aa17.23■□□□□ 0.35
C9orf139-202ENST00000623196 SDSP20132 328 aa17.23■□□□□ 0.35
C9orf139-202ENST00000623196 UBE2HP62256 183 aa17.23■□□□□ 0.35
C9orf139-202ENST00000623196 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
C9orf139-202ENST00000623196 MINDY4BA8MYZ0 360 aa17.23■□□□□ 0.35
C9orf139-202ENST00000623196 MEIS3Q99687 375 aa17.23■□□□□ 0.35
C9orf139-202ENST00000623196 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
C9orf139-202ENST00000623196 KDM5BQ9UGL1 1544 aa17.23■□□□□ 0.35
C9orf139-202ENST00000623196 RBM5P52756 815 aaKnown RBP eCLIP17.22■□□□□ 0.35
C9orf139-202ENST00000623196 CCDC178Q5BJE1 867 aa17.22■□□□□ 0.35
C9orf139-202ENST00000623196 PAXBP1Q9Y5B6 917 aa17.22■□□□□ 0.35
C9orf139-202ENST00000623196 CD109Q6YHK3 1445 aa17.22■□□□□ 0.35
C9orf139-202ENST00000623196 DUOX2Q9NRD8 1548 aa17.22■□□□□ 0.35
C9orf139-202ENST00000623196 GCOM1H8Y6P7 765 aaPredicted RBP17.22■□□□□ 0.35
C9orf139-202ENST00000623196 KIF20AO95235 890 aa17.22■□□□□ 0.35
C9orf139-202ENST00000623196 MYZAPP0CAP1 466 aa17.22■□□□□ 0.35
C9orf139-202ENST00000623196 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
C9orf139-202ENST00000623196 IBSPP21815 317 aaPredicted RBP17.22■□□□□ 0.35
C9orf139-202ENST00000623196 WASLO00401 505 aaPredicted RBP17.22■□□□□ 0.35
C9orf139-202ENST00000623196 DNA2P51530 1060 aa17.22■□□□□ 0.35
C9orf139-202ENST00000623196 HLTFQ14527 1009 aaKnown RBP eCLIP17.22■□□□□ 0.35
C9orf139-202ENST00000623196 TAF7Q15545 349 aaPredicted RBP17.21■□□□□ 0.35
C9orf139-202ENST00000623196 ZSCAN23Q3MJ62 389 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 IQCA1Q86XH1 822 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 CCDC82Q8N4S0 544 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 BIN1O00499 593 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 ZNF213O14771 459 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 PRDM11Q9NQV5 511 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 SLC12A7Q9Y666 1083 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 CCDC8Q9H0W5 538 aaPredicted RBP17.21■□□□□ 0.35
C9orf139-202ENST00000623196 ZRANB1Q9UGI0 708 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 NEBLO76041 1014 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 GJB2P29033 226 aa17.21■□□□□ 0.35
C9orf139-202ENST00000623196 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
C9orf139-202ENST00000623196 MATR3P43243 847 aaKnown RBP eCLIP17.2■□□□□ 0.34
C9orf139-202ENST00000623196 ALS2CR12Q96Q35 445 aa17.2■□□□□ 0.34
C9orf139-202ENST00000623196 ZBTB40Q9NUA8 1239 aa17.2■□□□□ 0.34
C9orf139-202ENST00000623196 BCCIPQ9P287 314 aaKnown RBP eCLIP17.2■□□□□ 0.34
C9orf139-202ENST00000623196 GOLGA8BA8MQT2 603 aa17.2■□□□□ 0.34
C9orf139-202ENST00000623196 HCLS1P14317 486 aaPredicted RBP17.2■□□□□ 0.34
C9orf139-202ENST00000623196 CTR9Q6PD62 1173 aa17.2■□□□□ 0.34
C9orf139-202ENST00000623196 MKNK2Q9HBH9 465 aa17.2■□□□□ 0.34
C9orf139-202ENST00000623196 ECHDC1Q9NTX5 307 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms