RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 NIP7Q9Y221 180 aaKnown RBP eCLIP26.93■■□□□ 1.9
SMC6-210ENST00000621152 MYL6BP14649 208 aa26.92■■□□□ 1.9
SMC6-210ENST00000621152 BABAM1Q9NWV8 329 aa26.92■■□□□ 1.9
SMC6-210ENST00000621152 RNF181Q9P0P0 153 aa26.92■■□□□ 1.9
SMC6-210ENST00000621152 SCN7AQ01118 1682 aa26.92■■□□□ 1.9
SMC6-210ENST00000621152 ARFGEF1Q9Y6D6 1849 aa26.91■■□□□ 1.9
SMC6-210ENST00000621152 FAM177BA6PVY3 158 aa26.91■■□□□ 1.9
SMC6-210ENST00000621152 RGL2O15211 777 aa26.91■■□□□ 1.9
SMC6-210ENST00000621152 TPTE2Q6XPS3 522 aa26.91■■□□□ 1.9
SMC6-210ENST00000621152 EIF2S2P20042 333 aaKnown RBP26.89■■□□□ 1.9
SMC6-210ENST00000621152 TTLL7Q6ZT98 887 aa26.89■■□□□ 1.9
SMC6-210ENST00000621152 ZNF219Q9P2Y4 722 aaPredicted RBP26.89■■□□□ 1.9
SMC6-210ENST00000621152 ERVV-1B6SEH8 477 aa26.88■■□□□ 1.89
SMC6-210ENST00000621152 KIF3CO14782 793 aa26.88■■□□□ 1.89
SMC6-210ENST00000621152 RASSF7Q02833 373 aa26.88■■□□□ 1.89
SMC6-210ENST00000621152 TRIM35Q9UPQ4 493 aa26.88■■□□□ 1.89
SMC6-210ENST00000621152 LAS1LQ9Y4W2 734 aaKnown RBP26.88■■□□□ 1.89
SMC6-210ENST00000621152 KDM3BQ7LBC6 1761 aa26.88■■□□□ 1.89
SMC6-210ENST00000621152 KIF6Q6ZMV9 814 aa26.87■■□□□ 1.89
SMC6-210ENST00000621152 CNKSR1Q969H4 720 aa26.87■■□□□ 1.89
SMC6-210ENST00000621152 C21orf2O43822 256 aa26.86■■□□□ 1.89
SMC6-210ENST00000621152 SRGNP10124 158 aa26.86■■□□□ 1.89
SMC6-210ENST00000621152 STYK1Q6J9G0 422 aa26.86■■□□□ 1.89
SMC6-210ENST00000621152 MASTLQ96GX5 879 aa26.86■■□□□ 1.89
SMC6-210ENST00000621152 MAP3K15Q6ZN16 1313 aa26.86■■□□□ 1.89
SMC6-210ENST00000621152 GTF2E1P29083 439 aaPredicted RBP26.85■■□□□ 1.89
SMC6-210ENST00000621152 CHL1O00533 1208 aa26.84■■□□□ 1.89
SMC6-210ENST00000621152 LMNB1P20700 586 aa26.84■■□□□ 1.89
SMC6-210ENST00000621152 ZBTB3Q9H5J0 574 aa26.84■■□□□ 1.89
SMC6-210ENST00000621152 NMRK2Q9NPI5 230 aa26.84■■□□□ 1.89
SMC6-210ENST00000621152 ERBB4Q15303 1308 aa26.84■■□□□ 1.89
SMC6-210ENST00000621152 BCORQ6W2J9 1755 aa26.84■■□□□ 1.89
SMC6-210ENST00000621152 PRELPP51888 382 aa26.83■■□□□ 1.89
SMC6-210ENST00000621152 ANKRD31Q8N7Z5 1873 aa26.83■■□□□ 1.88
SMC6-210ENST00000621152 NECTIN2Q92692 538 aa26.82■■□□□ 1.88
SMC6-210ENST00000621152 NFKBIEO00221 500 aa26.81■■□□□ 1.88
SMC6-210ENST00000621152 PDIA6Q15084 440 aa26.81■■□□□ 1.88
SMC6-210ENST00000621152 LAMB4A4D0S4 1761 aa26.8■■□□□ 1.88
SMC6-210ENST00000621152 KLRG2A4D1S0 409 aaPredicted RBP26.8■■□□□ 1.88
SMC6-210ENST00000621152 ANXA1P04083 346 aa26.8■■□□□ 1.88
SMC6-210ENST00000621152 GPTP24298 496 aa26.8■■□□□ 1.88
SMC6-210ENST00000621152 PRPF40BQ6NWY9 871 aaKnown RBP26.8■■□□□ 1.88
SMC6-210ENST00000621152 NYXQ9GZU5 481 aa26.8■■□□□ 1.88
SMC6-210ENST00000621152 KDM2BQ8NHM5 1336 aa26.8■■□□□ 1.88
SMC6-210ENST00000621152 DLEC1Q9Y238 1755 aa26.79■■□□□ 1.88
SMC6-210ENST00000621152 APAF1O14727 1248 aa26.79■■□□□ 1.88
SMC6-210ENST00000621152 NPR1P16066 1061 aa26.79■■□□□ 1.88
SMC6-210ENST00000621152 KRT24Q2M2I5 525 aa26.79■■□□□ 1.88
SMC6-210ENST00000621152 PROSER3Q2NL68 480 aa26.78■■□□□ 1.88
SMC6-210ENST00000621152 NUTM1Q86Y26 1132 aa26.78■■□□□ 1.88
SMC6-210ENST00000621152 RRAGCQ9HB90 399 aa26.78■■□□□ 1.88
SMC6-210ENST00000621152 TOMM70O94826 608 aa26.77■■□□□ 1.88
SMC6-210ENST00000621152 GIGYF2Q6Y7W6 1299 aaKnown RBP26.77■■□□□ 1.88
SMC6-210ENST00000621152 LRP10Q7Z4F1 713 aa26.77■■□□□ 1.88
SMC6-210ENST00000621152 ZNF34Q8IZ26 560 aa26.77■■□□□ 1.88
SMC6-210ENST00000621152 ERFEQ4G0M1 354 aa26.76■■□□□ 1.87
SMC6-210ENST00000621152 SUSD4Q5VX71 490 aa26.76■■□□□ 1.87
SMC6-210ENST00000621152 AIMP1Q12904 312 aaKnown RBP26.75■■□□□ 1.87
SMC6-210ENST00000621152 SOGA3Q5TF21 947 aa26.75■■□□□ 1.87
SMC6-210ENST00000621152 COPS6Q7L5N1 327 aa26.75■■□□□ 1.87
SMC6-210ENST00000621152 CFAP44Q96MT7 982 aa26.75■■□□□ 1.87
SMC6-210ENST00000621152 SBF1O95248 1867 aa26.74■■□□□ 1.87
SMC6-210ENST00000621152 ZNF316A6NFI3 1004 aaPredicted RBP26.74■■□□□ 1.87
SMC6-210ENST00000621152 CCDC184Q52MB2 194 aa26.74■■□□□ 1.87
SMC6-210ENST00000621152 C16orf71Q8IYS4 520 aaPredicted RBP26.74■■□□□ 1.87
SMC6-210ENST00000621152 UBN2Q6ZU65 1347 aa26.73■■□□□ 1.87
SMC6-210ENST00000621152 ZC3H4Q9UPT8 1303 aaKnown RBP26.73■■□□□ 1.87
SMC6-210ENST00000621152 HSPA6P17066 643 aa26.73■■□□□ 1.87
SMC6-210ENST00000621152 ALDH1B1P30837 517 aa26.73■■□□□ 1.87
SMC6-210ENST00000621152 XAGE3Q8WTP9 111 aa26.73■■□□□ 1.87
SMC6-210ENST00000621152 C7orf43Q8WVR3 580 aa26.73■■□□□ 1.87
SMC6-210ENST00000621152 TAOK3Q9H2K8 898 aa26.73■■□□□ 1.87
SMC6-210ENST00000621152 DDX21Q9NR30 783 aaKnown RBP eCLIP26.73■■□□□ 1.87
SMC6-210ENST00000621152 GLTPD2A6NH11 291 aa26.72■■□□□ 1.87
SMC6-210ENST00000621152 COL11A2P13942 1736 aaPredicted RBP26.72■■□□□ 1.87
SMC6-210ENST00000621152 PPP1R42Q7Z4L9 355 aa26.71■■□□□ 1.87
SMC6-210ENST00000621152 SLX4Q8IY92 1834 aa26.71■■□□□ 1.87
SMC6-210ENST00000621152 PARP10Q53GL7 1025 aa26.7■■□□□ 1.86
SMC6-210ENST00000621152 MBIPQ9NS73 344 aa26.7■■□□□ 1.86
SMC6-210ENST00000621152 LTBP3Q9NS15 1303 aa26.69■■□□□ 1.86
SMC6-210ENST00000621152 CCDC93Q567U6 631 aa26.69■■□□□ 1.86
SMC6-210ENST00000621152 HDGFL1Q5TGJ6 251 aa26.69■■□□□ 1.86
SMC6-210ENST00000621152 DUSP27Q5VZP5 1158 aa26.69■■□□□ 1.86
SMC6-210ENST00000621152 DPY19L2Q6NUT2 758 aa26.69■■□□□ 1.86
SMC6-210ENST00000621152 CHPF2Q9P2E5 772 aa26.69■■□□□ 1.86
SMC6-210ENST00000621152 NUP98P52948 1817 aa26.69■■□□□ 1.86
SMC6-210ENST00000621152 NTSR2O95665 410 aa26.68■■□□□ 1.86
SMC6-210ENST00000621152 ZNF853P0CG23 659 aa26.68■■□□□ 1.86
SMC6-210ENST00000621152 CALD1Q05682 793 aaKnown RBP26.68■■□□□ 1.86
SMC6-210ENST00000621152 UTP14AQ9BVJ6 771 aaKnown RBP26.68■■□□□ 1.86
SMC6-210ENST00000621152 ABCC12Q96J65 1359 aa26.68■■□□□ 1.86
SMC6-210ENST00000621152 HOXB7P09629 217 aa26.67■■□□□ 1.86
SMC6-210ENST00000621152 CRY2Q49AN0 593 aa26.67■■□□□ 1.86
SMC6-210ENST00000621152 OLFM4Q6UX06 510 aa26.67■■□□□ 1.86
SMC6-210ENST00000621152 RBM46Q8TBY0 533 aaKnown RBP26.67■■□□□ 1.86
SMC6-210ENST00000621152 RPGRQ92834 1020 aaKnown RBP26.67■■□□□ 1.86
SMC6-210ENST00000621152 VEGFAP15692 232 aaPredicted RBP26.66■■□□□ 1.86
SMC6-210ENST00000621152 GNAI1P63096 354 aa26.66■■□□□ 1.86
SMC6-210ENST00000621152 HSP90AB3PQ58FF7 597 aa26.66■■□□□ 1.86
SMC6-210ENST00000621152 IFT57Q9NWB7 429 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms