RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ZC3H6P61129 1189 aaKnown RBP12.81□□□□□ -0.36
CDH1-214ENST00000621016 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
CDH1-214ENST00000621016 PPP1R9BQ96SB3 815 aa12.81□□□□□ -0.36
CDH1-214ENST00000621016 CCDC8Q9H0W5 538 aaPredicted RBP12.81□□□□□ -0.36
CDH1-214ENST00000621016 DIAPH3Q9NSV4 1193 aa12.81□□□□□ -0.36
CDH1-214ENST00000621016 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
CDH1-214ENST00000621016 SLC39A6Q13433 755 aa12.8□□□□□ -0.36
CDH1-214ENST00000621016 BCL2L12Q9HB09 334 aa12.8□□□□□ -0.36
CDH1-214ENST00000621016 THEMISQ8N1K5 641 aaPredicted RBP12.8□□□□□ -0.36
CDH1-214ENST00000621016 DNAAF4Q8WXU2 420 aa12.8□□□□□ -0.36
CDH1-214ENST00000621016 ZKSCAN5Q9Y2L8 839 aa12.8□□□□□ -0.36
CDH1-214ENST00000621016 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
CDH1-214ENST00000621016 PPFIA3O75145 1194 aa12.8□□□□□ -0.36
CDH1-214ENST00000621016 CASTP20810 708 aaKnown RBP12.8□□□□□ -0.36
CDH1-214ENST00000621016 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
CDH1-214ENST00000621016 MAP3K2Q9Y2U5 619 aa12.8□□□□□ -0.36
CDH1-214ENST00000621016 NDUFB9Q9Y6M9 179 aa12.8□□□□□ -0.36
CDH1-214ENST00000621016 CEP170BQ9Y4F5 1589 aaPredicted RBP12.8□□□□□ -0.36
CDH1-214ENST00000621016 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
CDH1-214ENST00000621016 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
CDH1-214ENST00000621016 ANKRD26Q9UPS8 1709 aa12.79□□□□□ -0.36
CDH1-214ENST00000621016 VPS37CA5D8V6 355 aaPredicted RBP12.79□□□□□ -0.36
CDH1-214ENST00000621016 CSPP1Q1MSJ5 1256 aa12.79□□□□□ -0.36
CDH1-214ENST00000621016 PRPF40BQ6NWY9 871 aaKnown RBP12.79□□□□□ -0.36
CDH1-214ENST00000621016 FERMT3Q86UX7 667 aa12.79□□□□□ -0.36
CDH1-214ENST00000621016 SIRT1Q96EB6 747 aa12.79□□□□□ -0.36
CDH1-214ENST00000621016 NECAB1Q8N987 351 aa12.79□□□□□ -0.36
CDH1-214ENST00000621016 TTC21AQ8NDW8 1320 aa12.79□□□□□ -0.36
CDH1-214ENST00000621016 IFIT2P09913 472 aaKnown RBP12.78□□□□□ -0.36
CDH1-214ENST00000621016 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
CDH1-214ENST00000621016 CCDC83Q8IWF9 413 aa12.78□□□□□ -0.36
CDH1-214ENST00000621016 ORAI2Q96SN7 254 aa12.78□□□□□ -0.36
CDH1-214ENST00000621016 CNPY2Q9Y2B0 182 aa12.78□□□□□ -0.36
CDH1-214ENST00000621016 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
CDH1-214ENST00000621016 ZNF500O60304 480 aaPredicted RBP12.78□□□□□ -0.36
CDH1-214ENST00000621016 CYP2E1P05181 493 aaPredicted RBP12.78□□□□□ -0.36
CDH1-214ENST00000621016 FAM43BQ6ZT52 329 aaPredicted RBP12.78□□□□□ -0.36
CDH1-214ENST00000621016 USP48Q86UV5 1035 aa12.78□□□□□ -0.36
CDH1-214ENST00000621016 AACSQ86V21 672 aa12.78□□□□□ -0.36
CDH1-214ENST00000621016 KIF24Q5T7B8 1368 aa12.78□□□□□ -0.36
CDH1-214ENST00000621016 MAP3K5Q99683 1374 aa12.78□□□□□ -0.36
CDH1-214ENST00000621016 MYRIPQ8NFW9 859 aa12.78□□□□□ -0.36
CDH1-214ENST00000621016 JAKMIP1Q96N16 626 aaKnown RBP12.78□□□□□ -0.36
CDH1-214ENST00000621016 BCCIPQ9P287 314 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDH1-214ENST00000621016 IBTKQ9P2D0 1353 aaPredicted RBP12.78□□□□□ -0.36
CDH1-214ENST00000621016 STK3Q13188 491 aa12.77□□□□□ -0.36
CDH1-214ENST00000621016 CLASRPQ8N2M8 674 aaKnown RBP12.77□□□□□ -0.36
CDH1-214ENST00000621016 BOLA2Q9H3K6 86 aa12.77□□□□□ -0.36
CDH1-214ENST00000621016 OSBPL3Q9H4L5 887 aa12.77□□□□□ -0.36
CDH1-214ENST00000621016 ARHGEF10O15013 1369 aa12.77□□□□□ -0.36
CDH1-214ENST00000621016 FOSBP53539 338 aa12.77□□□□□ -0.37
CDH1-214ENST00000621016 AK2P54819 239 aa12.77□□□□□ -0.37
CDH1-214ENST00000621016 FAM173BQ6P4H8 233 aa12.77□□□□□ -0.37
CDH1-214ENST00000621016 ISY1Q9ULR0 285 aaKnown RBP12.77□□□□□ -0.37
CDH1-214ENST00000621016 PSEN1P49768 467 aa12.77□□□□□ -0.37
CDH1-214ENST00000621016 EIF4A1P60842 406 aaKnown RBP12.77□□□□□ -0.37
CDH1-214ENST00000621016 CNTROBQ8N137 903 aa12.77□□□□□ -0.37
CDH1-214ENST00000621016 KIF1BPQ96EK5 621 aa12.77□□□□□ -0.37
CDH1-214ENST00000621016 CLGNO14967 610 aa12.76□□□□□ -0.37
CDH1-214ENST00000621016 DDX17Q92841 729 aaKnown RBP12.76□□□□□ -0.37
CDH1-214ENST00000621016 EDC3Q96F86 508 aaKnown RBP12.76□□□□□ -0.37
CDH1-214ENST00000621016 SMC3Q9UQE7 1217 aa12.76□□□□□ -0.37
CDH1-214ENST00000621016 PTH1RQ03431 593 aa12.76□□□□□ -0.37
CDH1-214ENST00000621016 ADCK5Q3MIX3 580 aa12.76□□□□□ -0.37
CDH1-214ENST00000621016 BANK1Q8NDB2 785 aa12.76□□□□□ -0.37
CDH1-214ENST00000621016 TBX22Q9Y458 520 aa12.76□□□□□ -0.37
CDH1-214ENST00000621016 RSPH14Q9UHP6 348 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 SNX14Q9Y5W7 946 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 SPATA31D1Q6ZQQ2 1576 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 RIMBP3CA6NJZ7 1639 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 RIMBP3BA6NNM3 1639 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 RIMBP3Q9UFD9 1639 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 LARGE1O95461 756 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 COL9A3Q14050 684 aaPredicted RBP12.75□□□□□ -0.37
CDH1-214ENST00000621016 SSH3Q8TE77 659 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 NLRP2Q9NX02 1062 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 GYS2P54840 703 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 FAM227BQ96M60 508 aa12.75□□□□□ -0.37
CDH1-214ENST00000621016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.75□□□□□ -0.37
CDH1-214ENST00000621016 BRD1O95696 1058 aa12.74□□□□□ -0.37
CDH1-214ENST00000621016 RIC3Q7Z5B4 369 aa12.74□□□□□ -0.37
CDH1-214ENST00000621016 ZNF330Q9Y3S2 320 aaPredicted RBP12.74□□□□□ -0.37
CDH1-214ENST00000621016 USP31Q70CQ4 1352 aa12.74□□□□□ -0.37
CDH1-214ENST00000621016 CCDC66A2RUB6 948 aa12.74□□□□□ -0.37
CDH1-214ENST00000621016 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
CDH1-214ENST00000621016 ZNF445P59923 1031 aa12.74□□□□□ -0.37
CDH1-214ENST00000621016 BEND3Q5T5X7 828 aa12.74□□□□□ -0.37
CDH1-214ENST00000621016 LRSAM1Q6UWE0 723 aa12.74□□□□□ -0.37
CDH1-214ENST00000621016 CHGBP05060 677 aa12.73□□□□□ -0.37
CDH1-214ENST00000621016 NAA30Q147X3 362 aaPredicted RBP12.73□□□□□ -0.37
CDH1-214ENST00000621016 PI4K2BQ8TCG2 481 aa12.73□□□□□ -0.37
CDH1-214ENST00000621016 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
CDH1-214ENST00000621016 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
CDH1-214ENST00000621016 SGSM2O43147 1006 aa12.73□□□□□ -0.37
CDH1-214ENST00000621016 TLR7Q9NYK1 1049 aaKnown RBP12.73□□□□□ -0.37
CDH1-214ENST00000621016 PLEKHG1Q9ULL1 1385 aa12.73□□□□□ -0.37
CDH1-214ENST00000621016 HCLS1P14317 486 aaPredicted RBP12.73□□□□□ -0.37
CDH1-214ENST00000621016 SYT1P21579 422 aa12.73□□□□□ -0.37
CDH1-214ENST00000621016 MCM2P49736 904 aa12.73□□□□□ -0.37
CDH1-214ENST00000621016 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms