RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 DNM1Q05193 864 aaKnown RBP23.45■■□□□ 1.35
PDLIM3-212ENST00000620787 CCDC83Q8IWF9 413 aa23.45■■□□□ 1.35
PDLIM3-212ENST00000620787 TSC1Q92574 1164 aa23.45■■□□□ 1.35
PDLIM3-212ENST00000620787 NBPF7P0C2Y1 421 aaPredicted RBP23.45■■□□□ 1.34
PDLIM3-212ENST00000620787 PLEKHG1Q9ULL1 1385 aa23.44■■□□□ 1.34
PDLIM3-212ENST00000620787 PTH1RQ03431 593 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 VPS53Q5VIR6 699 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 TTC41PQ6P2S7 1318 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 ST3GAL1Q11201 340 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 ADCK5Q3MIX3 580 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 KCNF1Q9H3M0 494 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 DTNBO60941 627 aa23.42■■□□□ 1.34
PDLIM3-212ENST00000620787 HOXC9P31274 260 aa23.42■■□□□ 1.34
PDLIM3-212ENST00000620787 ESF1Q9H501 851 aaKnown RBP23.42■■□□□ 1.34
PDLIM3-212ENST00000620787 PDRG1Q9NUG6 133 aa23.42■■□□□ 1.34
PDLIM3-212ENST00000620787 KCNB2Q92953 911 aa23.42■■□□□ 1.34
PDLIM3-212ENST00000620787 GLRX3O76003 335 aaKnown RBP23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 BEND3Q5T5X7 828 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 NGDNQ8NEJ9 315 aaKnown RBP23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 KIAA1524Q8TCG1 905 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 ZSCAN31Q96LW9 406 aaPredicted RBP23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 JAKMIP1Q96N16 626 aaKnown RBP23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 ZSWIM6Q9HCJ5 1215 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 SH2B1Q9NRF2 756 aaPredicted RBP23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 DIAPH3Q9NSV4 1193 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 DIP2AQ14689 1571 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 KDM3BQ7LBC6 1761 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 LTKP29376 864 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 HSP90AB4PQ58FF6 505 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 TM6SF1Q9BZW5 370 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 PLCB2Q00722 1185 aa23.4■■□□□ 1.34
PDLIM3-212ENST00000620787 PRPF40BQ6NWY9 871 aaKnown RBP23.4■■□□□ 1.34
PDLIM3-212ENST00000620787 RUFY2Q8WXA3 655 aa23.4■■□□□ 1.34
PDLIM3-212ENST00000620787 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
PDLIM3-212ENST00000620787 PYCARDQ9ULZ3 195 aa23.4■■□□□ 1.34
PDLIM3-212ENST00000620787 USP54Q70EL1 1684 aa23.39■■□□□ 1.34
PDLIM3-212ENST00000620787 DNAAF4Q8WXU2 420 aa23.38■■□□□ 1.33
PDLIM3-212ENST00000620787 KIF3AQ9Y496 699 aa23.38■■□□□ 1.33
PDLIM3-212ENST00000620787 CYP46A1Q9Y6A2 500 aa23.38■■□□□ 1.33
PDLIM3-212ENST00000620787 ME3Q16798 604 aa23.38■■□□□ 1.33
PDLIM3-212ENST00000620787 VPS37CA5D8V6 355 aaPredicted RBP23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 TPM3P06753 285 aa23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 EIF2S2P20042 333 aaKnown RBP23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 CEMIPQ8WUJ3 1361 aa23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 CCDC192P0DO97 292 aa23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 NLRP6P59044 892 aa23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 CHPF2Q9P2E5 772 aa23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 PI4KAP2A4QPH2 592 aa23.36■■□□□ 1.33
PDLIM3-212ENST00000620787 NECTIN1Q15223 517 aa23.36■■□□□ 1.33
PDLIM3-212ENST00000620787 PI4KAP1Q8N8J0 262 aa23.36■■□□□ 1.33
PDLIM3-212ENST00000620787 EIF4A1P60842 406 aaKnown RBP23.36■■□□□ 1.33
PDLIM3-212ENST00000620787 FAM177BA6PVY3 158 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 OS9Q13438 667 aaPredicted RBP23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 SLC26A8Q96RN1 970 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 MTX1Q13505 466 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 TTC6Q86TZ1 520 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 NECAB1Q8N987 351 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 SPC24Q8NBT2 197 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 BCL2L12Q9HB09 334 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 ECHDC1Q9NTX5 307 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 ADCY9O60503 1353 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 CCDC171Q6TFL3 1326 aa23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 LTV1Q96GA3 475 aaPredicted RBP23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 PRDM10Q9NQV6 1147 aa23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 CLASRPQ8N2M8 674 aaKnown RBP23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 DDX54Q8TDD1 881 aaKnown RBP23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 TPCN1Q9ULQ1 816 aa23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 HOXB7P09629 217 aa23.33■■□□□ 1.33
PDLIM3-212ENST00000620787 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.32
PDLIM3-212ENST00000620787 FAM200AQ8TCP9 573 aa23.33■■□□□ 1.32
PDLIM3-212ENST00000620787 AMOTL2Q9Y2J4 779 aa23.33■■□□□ 1.32
PDLIM3-212ENST00000620787 GOLGA6L6A8MZA4 724 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 NUTM2GQ5VZR2 741 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 RBM8AQ9Y5S9 174 aaKnown RBP23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 MRVI1Q9Y6F6 885 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 ELP1O95163 1332 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 LTN1O94822 1766 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 KRT85P78386 507 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 CDC37L1Q7L3B6 337 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 LIG1P18858 919 aa23.31■■□□□ 1.32
PDLIM3-212ENST00000620787 MAP3K11Q16584 847 aa23.31■■□□□ 1.32
PDLIM3-212ENST00000620787 LARP1BQ659C4 914 aaKnown RBP23.31■■□□□ 1.32
PDLIM3-212ENST00000620787 CREB3L3Q68CJ9 461 aa23.31■■□□□ 1.32
PDLIM3-212ENST00000620787 EVI5LQ96CN4 794 aa23.31■■□□□ 1.32
PDLIM3-212ENST00000620787 RIOK3O14730 519 aaKnown RBP23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 ANXA1P04083 346 aa23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 NUP62CLQ9H1M0 184 aa23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 ZKSCAN1P17029 563 aaPredicted RBP23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 TYRO3Q06418 890 aa23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 COL9A3Q14050 684 aaPredicted RBP23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 GPATCH3Q96I76 525 aa23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 LGR6Q9HBX8 967 aa23.29■■□□□ 1.32
PDLIM3-212ENST00000620787 KCNQ3O43525 872 aa23.29■■□□□ 1.32
PDLIM3-212ENST00000620787 FERMT3Q86UX7 667 aa23.29■■□□□ 1.32
PDLIM3-212ENST00000620787 MAP4K1Q92918 833 aa23.29■■□□□ 1.32
PDLIM3-212ENST00000620787 PA2G4Q9UQ80 394 aaKnown RBP23.29■■□□□ 1.32
PDLIM3-212ENST00000620787 IFIT2P09913 472 aaKnown RBP23.28■■□□□ 1.32
PDLIM3-212ENST00000620787 ZSCAN20P17040 1043 aaPredicted RBP23.28■■□□□ 1.32
PDLIM3-212ENST00000620787 PPP4R3BQ5MIZ7 849 aa23.28■■□□□ 1.32
PDLIM3-212ENST00000620787 FAM173BQ6P4H8 233 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms