RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 PDE4AP27815 886 aa19.04■□□□□ 0.64
COPS7B-224ENST00000620578 VSIG10Q8N0Z9 540 aa19.04■□□□□ 0.64
COPS7B-224ENST00000620578 METTL22Q9BUU2 404 aaPredicted RBP19.04■□□□□ 0.64
COPS7B-224ENST00000620578 SMC5Q8IY18 1101 aa19.04■□□□□ 0.64
COPS7B-224ENST00000620578 RGS17Q9UGC6 210 aaPredicted RBP19.04■□□□□ 0.64
COPS7B-224ENST00000620578 THSD7AQ9UPZ6 1657 aa19.03■□□□□ 0.64
COPS7B-224ENST00000620578 NEURL1BA8MQ27 555 aa19.03■□□□□ 0.64
COPS7B-224ENST00000620578 SMARCA5O60264 1052 aaPredicted RBP19.03■□□□□ 0.64
COPS7B-224ENST00000620578 HLFQ16534 295 aa19.03■□□□□ 0.64
COPS7B-224ENST00000620578 LINS1Q8NG48 757 aa19.03■□□□□ 0.64
COPS7B-224ENST00000620578 EXOC6BQ9Y2D4 811 aa19.03■□□□□ 0.64
COPS7B-224ENST00000620578 GNAI3P08754 354 aa19.02■□□□□ 0.64
COPS7B-224ENST00000620578 CRKLP46109 303 aaKnown RBP19.02■□□□□ 0.64
COPS7B-224ENST00000620578 INTS5Q6P9B9 1019 aaKnown RBP19.02■□□□□ 0.64
COPS7B-224ENST00000620578 C16orf71Q8IYS4 520 aaPredicted RBP19.02■□□□□ 0.64
COPS7B-224ENST00000620578 PLBD2Q8NHP8 589 aa19.02■□□□□ 0.64
COPS7B-224ENST00000620578 KAZALD1Q96I82 304 aa19.02■□□□□ 0.64
COPS7B-224ENST00000620578 CHMP4BQ9H444 224 aaKnown RBP19.02■□□□□ 0.63
COPS7B-224ENST00000620578 GCKRQ14397 625 aa19.01■□□□□ 0.63
COPS7B-224ENST00000620578 EPHA10Q5JZY3 1008 aa19.01■□□□□ 0.63
COPS7B-224ENST00000620578 PPP1R42Q7Z4L9 355 aa19.01■□□□□ 0.63
COPS7B-224ENST00000620578 SUCLG2Q96I99 432 aa19.01■□□□□ 0.63
COPS7B-224ENST00000620578 LAMB4A4D0S4 1761 aa19■□□□□ 0.63
COPS7B-224ENST00000620578 NEXNQ0ZGT2 675 aa19■□□□□ 0.63
COPS7B-224ENST00000620578 RPAP2Q8IXW5 612 aaPredicted RBP19■□□□□ 0.63
COPS7B-224ENST00000620578 SYNE4Q8N205 404 aa19■□□□□ 0.63
COPS7B-224ENST00000620578 LINC00116Q8NCU8 138 aa19■□□□□ 0.63
COPS7B-224ENST00000620578 TEX13AQ9BXU3 409 aaPredicted RBP19■□□□□ 0.63
COPS7B-224ENST00000620578 GRM8O00222 908 aa19■□□□□ 0.63
COPS7B-224ENST00000620578 TRIM37O94972 964 aa19■□□□□ 0.63
COPS7B-224ENST00000620578 GPTP24298 496 aa19■□□□□ 0.63
COPS7B-224ENST00000620578 UBE3BQ7Z3V4 1068 aa19■□□□□ 0.63
COPS7B-224ENST00000620578 MYH14Q7Z406 1995 aaKnown RBP18.99■□□□□ 0.63
COPS7B-224ENST00000620578 KRT27Q7Z3Y8 459 aa18.99■□□□□ 0.63
COPS7B-224ENST00000620578 AMIGO3Q86WK7 504 aa18.99■□□□□ 0.63
COPS7B-224ENST00000620578 PXDNLA1KZ92 1463 aa18.99■□□□□ 0.63
COPS7B-224ENST00000620578 POTEAQ6S8J7 498 aa18.99■□□□□ 0.63
COPS7B-224ENST00000620578 OTUD7AQ8TE49 926 aaPredicted RBP18.99■□□□□ 0.63
COPS7B-224ENST00000620578 DCTPP1Q9H773 170 aa18.99■□□□□ 0.63
COPS7B-224ENST00000620578 ATP8B2P98198 1209 aa18.98■□□□□ 0.63
COPS7B-224ENST00000620578 A0A087WZG4 1122 aa18.98■□□□□ 0.63
COPS7B-224ENST00000620578 SRGAP3O43295 1099 aa18.98■□□□□ 0.63
COPS7B-224ENST00000620578 ALDH1L1O75891 902 aa18.98■□□□□ 0.63
COPS7B-224ENST00000620578 NUCB1Q02818 461 aa18.98■□□□□ 0.63
COPS7B-224ENST00000620578 KLHDC4Q8TBB5 520 aa18.98■□□□□ 0.63
COPS7B-224ENST00000620578 BICC1Q9H694 974 aaKnown RBP18.98■□□□□ 0.63
COPS7B-224ENST00000620578 ERBB4Q15303 1308 aa18.97■□□□□ 0.63
COPS7B-224ENST00000620578 CHD1LQ86WJ1 897 aa18.97■□□□□ 0.63
COPS7B-224ENST00000620578 PA2G4Q9UQ80 394 aaKnown RBP18.97■□□□□ 0.63
COPS7B-224ENST00000620578 BRWD3Q6RI45 1802 aa18.97■□□□□ 0.63
COPS7B-224ENST00000620578 CCDC87Q9NVE4 849 aa18.97■□□□□ 0.63
COPS7B-224ENST00000620578 TJP1Q07157 1748 aa18.96■□□□□ 0.63
COPS7B-224ENST00000620578 RBM6P78332 1123 aaKnown RBP18.96■□□□□ 0.63
COPS7B-224ENST00000620578 FBXO41Q8TF61 875 aa18.96■□□□□ 0.63
COPS7B-224ENST00000620578 FAM177BA6PVY3 158 aa18.96■□□□□ 0.63
COPS7B-224ENST00000620578 ZNF772Q68DY9 489 aaPredicted RBP18.96■□□□□ 0.63
COPS7B-224ENST00000620578 DZIP3Q86Y13 1208 aaKnown RBP18.96■□□□□ 0.63
COPS7B-224ENST00000620578 SMARCC1Q92922 1105 aaPredicted RBP18.95■□□□□ 0.62
COPS7B-224ENST00000620578 LRRC4BQ9NT99 713 aa18.95■□□□□ 0.62
COPS7B-224ENST00000620578 ARFGEF2Q9Y6D5 1785 aa18.94■□□□□ 0.62
COPS7B-224ENST00000620578 EIF5P55010 431 aaKnown RBP18.94■□□□□ 0.62
COPS7B-224ENST00000620578 CCNL1Q9UK58 526 aaPredicted RBP18.94■□□□□ 0.62
COPS7B-224ENST00000620578 BTAF1O14981 1849 aa18.94■□□□□ 0.62
COPS7B-224ENST00000620578 KIF6Q6ZMV9 814 aa18.94■□□□□ 0.62
COPS7B-224ENST00000620578 GCC1Q96CN9 775 aa18.94■□□□□ 0.62
COPS7B-224ENST00000620578 FAM89AQ96GI7 184 aa18.94■□□□□ 0.62
COPS7B-224ENST00000620578 CCDC85AQ96PX6 553 aaPredicted RBP18.94■□□□□ 0.62
COPS7B-224ENST00000620578 MAP3K15Q6ZN16 1313 aa18.93■□□□□ 0.62
COPS7B-224ENST00000620578 RXRBP28702 533 aa18.93■□□□□ 0.62
COPS7B-224ENST00000620578 TCIRG1Q13488 830 aa18.93■□□□□ 0.62
COPS7B-224ENST00000620578 TSHZ3Q63HK5 1081 aa18.93■□□□□ 0.62
COPS7B-224ENST00000620578 RBM19Q9Y4C8 960 aaKnown RBP18.93■□□□□ 0.62
COPS7B-224ENST00000620578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.93■□□□□ 0.62
COPS7B-224ENST00000620578 SURF6O75683 361 aaKnown RBP18.92■□□□□ 0.62
COPS7B-224ENST00000620578 IL6STP40189 918 aaPredicted RBP18.92■□□□□ 0.62
COPS7B-224ENST00000620578 IL1RAPL2Q9NP60 686 aa18.92■□□□□ 0.62
COPS7B-224ENST00000620578 SSH3Q8TE77 659 aa18.92■□□□□ 0.62
COPS7B-224ENST00000620578 CASP7P55210 303 aa18.91■□□□□ 0.62
COPS7B-224ENST00000620578 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
COPS7B-224ENST00000620578 SIL1Q9H173 461 aa18.91■□□□□ 0.62
COPS7B-224ENST00000620578 CWC25Q9NXE8 425 aaPredicted RBP18.91■□□□□ 0.62
COPS7B-224ENST00000620578 GIGYF2Q6Y7W6 1299 aaKnown RBP18.91■□□□□ 0.62
COPS7B-224ENST00000620578 N4BP2Q86UW6 1770 aaPredicted RBP18.9■□□□□ 0.62
COPS7B-224ENST00000620578 SBF2Q86WG5 1849 aa18.9■□□□□ 0.62
COPS7B-224ENST00000620578 UTYO14607 1347 aa18.9■□□□□ 0.62
COPS7B-224ENST00000620578 HMMRO75330 724 aa18.9■□□□□ 0.62
COPS7B-224ENST00000620578 ISCA1Q9BUE6 129 aa18.9■□□□□ 0.62
COPS7B-224ENST00000620578 BCL11BQ9C0K0 894 aaPredicted RBP18.9■□□□□ 0.62
COPS7B-224ENST00000620578 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.61
COPS7B-224ENST00000620578 AFDNP55196 1824 aaKnown RBP18.89■□□□□ 0.61
COPS7B-224ENST00000620578 PHF14O94880 888 aa18.89■□□□□ 0.61
COPS7B-224ENST00000620578 POLA2Q14181 598 aa18.89■□□□□ 0.61
COPS7B-224ENST00000620578 FAM196AQ6ZSG2 479 aa18.89■□□□□ 0.61
COPS7B-224ENST00000620578 CHMP3Q9Y3E7 222 aa18.89■□□□□ 0.61
COPS7B-224ENST00000620578 H7C1W4 665 aa18.89■□□□□ 0.61
COPS7B-224ENST00000620578 SRP68Q9UHB9 627 aaKnown RBP18.89■□□□□ 0.61
COPS7B-224ENST00000620578 UBN2Q6ZU65 1347 aa18.88■□□□□ 0.61
COPS7B-224ENST00000620578 GNPATO15228 680 aa18.88■□□□□ 0.61
COPS7B-224ENST00000620578 C8orf34Q49A92 452 aa18.88■□□□□ 0.61
COPS7B-224ENST00000620578 LMBR1LQ6UX01 489 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms