RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 SYT10Q6XYQ8 523 aa11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 UNC5CLQ8IV45 518 aa11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 CCDC191Q8NCU4 936 aa11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 PPFIA3O75145 1194 aa11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 ARGLU1Q9NWB6 273 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 LRRFIP2Q9Y608 721 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 YTHDC2Q9H6S0 1430 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 SIGLEC1Q9BZZ2 1709 aa11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 CCDC69A6NI79 296 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 FYB1O15117 783 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 NRDCO43847 1150 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 LMAN1P49257 510 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 RAD51AP2Q09MP3 1159 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 CCDC144BQ3MJ40 725 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 CCDC144CPQ8IYA2 1237 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 GTF2A1P52655 376 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 ERCC4Q92889 916 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 MYOM2P54296 1465 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 ARHGAP31Q2M1Z3 1444 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 SMC2O95347 1197 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 RBM6P78332 1123 aaKnown RBP11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 RASSF4Q9H2L5 321 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 MRVI1Q9Y6F6 885 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 METP08581 1390 aa11.53□□□□□ -0.56
TNFAIP3-210ENST00000620204 TRIM66O15016 1216 aa11.52□□□□□ -0.56
TNFAIP3-210ENST00000620204 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.56
TNFAIP3-210ENST00000620204 GYS2P54840 703 aa11.52□□□□□ -0.56
TNFAIP3-210ENST00000620204 MCM10Q7L590 875 aa11.52□□□□□ -0.56
TNFAIP3-210ENST00000620204 SNW1Q13573 536 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 ERO1AQ96HE7 468 aa11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 PDRG1Q9NUG6 133 aa11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 EMILIN1Q9Y6C2 1016 aa11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 SURF6O75683 361 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 TPM4P67936 248 aa11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 PRPF40BQ6NWY9 871 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 TTC6Q86TZ1 520 aa11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 NUDT16Q96DE0 195 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 TSPYL1Q9H0U9 437 aa11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 ABCC4O15439 1325 aa11.52□□□□□ -0.57
TNFAIP3-210ENST00000620204 H3BQV1 296 aa11.51□□□□□ -0.57
TNFAIP3-210ENST00000620204 IFFO2Q5TF58 517 aa11.51□□□□□ -0.57
TNFAIP3-210ENST00000620204 FEZ2Q9UHY8 353 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-210ENST00000620204 ARHGEF40Q8TER5 1519 aa11.51□□□□□ -0.57
TNFAIP3-210ENST00000620204 SEC31AO94979 1220 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-210ENST00000620204 LARGE1O95461 756 aa11.51□□□□□ -0.57
TNFAIP3-210ENST00000620204 GNAI2P04899 355 aa11.51□□□□□ -0.57
TNFAIP3-210ENST00000620204 HSP90B1P14625 803 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-210ENST00000620204 HSPA2P54652 639 aa11.51□□□□□ -0.57
TNFAIP3-210ENST00000620204 RASEFQ8IZ41 740 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 DDX11Q96FC9 970 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 ZSWIM4Q9H7M6 989 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 DNAI1Q9UI46 699 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 A2ML1A8K2U0 1454 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 ANAPC15P60006 121 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 RRS1Q15050 365 aaKnown RBP11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 NME9Q86XW9 330 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 TCHHQ07283 1943 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 PIK3C2BO00750 1634 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 RUFY3Q7L099 469 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 ANKLE2Q86XL3 938 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 GOLGA6L1Q8N7Z2 621 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 PREX1Q8TCU6 1659 aa11.5□□□□□ -0.57
TNFAIP3-210ENST00000620204 ANKRD65E5RJM6 399 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 WASLO00401 505 aaPredicted RBP11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 LMOD3Q0VAK6 560 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 LRRC8AQ8IWT6 810 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 STK31Q9BXU1 1019 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 EPC1Q9H2F5 836 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 CCDC171Q6TFL3 1326 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 MYO5BQ9ULV0 1848 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 MSH6P52701 1360 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 TMEM2Q9UHN6 1383 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 CLCN6P51797 869 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 MTMR6Q9Y217 621 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 CYP46A1Q9Y6A2 500 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 RAD50Q92878 1312 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 SDF4Q9BRK5 362 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 IL25Q9H293 177 aa11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 CWC15Q9P013 229 aaKnown RBP11.49□□□□□ -0.57
TNFAIP3-210ENST00000620204 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 ZSCAN26Q16670 478 aa11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 CDC37L1Q7L3B6 337 aa11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 SNX14Q9Y5W7 946 aa11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 NR1I2O75469 434 aa11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 ST5P78524 1137 aa11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 G2E3Q7L622 706 aa11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 LTV1Q96GA3 475 aaPredicted RBP11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 DRC1Q96MC2 740 aa11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 IQSEC2Q5JU85 1478 aa11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 NEXMIFQ5QGS0 1516 aa11.48□□□□□ -0.57
TNFAIP3-210ENST00000620204 PNMA6AP0CW24 399 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 KCNA6P17658 529 aa11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 CYP2C19P33261 490 aa11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 HAP1P54257 671 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 SYCP1Q15431 976 aa11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 KDM5AP29375 1690 aaKnown RBP11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 A0A1W2PP64 1363 aa11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 ISM2Q6H9L7 571 aa11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 TMC6Q7Z403 805 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms