RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 ERVV-1B6SEH8 477 aa23.41■■□□□ 1.34
MALAT1-215ENST00000619449 MMP10P09238 476 aa23.41■■□□□ 1.34
MALAT1-215ENST00000619449 POLD1P28340 1107 aa23.41■■□□□ 1.34
MALAT1-215ENST00000619449 DDR1Q08345 913 aa23.41■■□□□ 1.34
MALAT1-215ENST00000619449 NPM2Q86SE8 214 aaKnown RBP23.41■■□□□ 1.34
MALAT1-215ENST00000619449 ARXQ96QS3 562 aa23.41■■□□□ 1.34
MALAT1-215ENST00000619449 CHMP4AQ9BY43 222 aa23.41■■□□□ 1.34
MALAT1-215ENST00000619449 NFIXQ14938 502 aa23.4■■□□□ 1.34
MALAT1-215ENST00000619449 HLFQ16534 295 aa23.4■■□□□ 1.34
MALAT1-215ENST00000619449 COPS6Q7L5N1 327 aa23.4■■□□□ 1.34
MALAT1-215ENST00000619449 XAGE3Q8WTP9 111 aa23.4■■□□□ 1.34
MALAT1-215ENST00000619449 HYPKQ9NX55 129 aa23.4■■□□□ 1.34
MALAT1-215ENST00000619449 POLRMTO00411 1230 aaKnown RBP23.39■■□□□ 1.33
MALAT1-215ENST00000619449 TBC1D9BQ66K14 1250 aa23.39■■□□□ 1.33
MALAT1-215ENST00000619449 NRXN2Q9P2S2 1712 aa23.39■■□□□ 1.33
MALAT1-215ENST00000619449 NUP98P52948 1817 aa23.38■■□□□ 1.33
MALAT1-215ENST00000619449 PHAXQ9H814 394 aaKnown RBP23.37■■□□□ 1.33
MALAT1-215ENST00000619449 GIGYF2Q6Y7W6 1299 aaKnown RBP23.36■■□□□ 1.33
MALAT1-215ENST00000619449 KIF6Q6ZMV9 814 aa23.36■■□□□ 1.33
MALAT1-215ENST00000619449 ATP10DQ9P241 1426 aa23.35■■□□□ 1.33
MALAT1-215ENST00000619449 CACNA1FO60840 1977 aa23.35■■□□□ 1.33
MALAT1-215ENST00000619449 TCERG1O14776 1098 aaKnown RBP23.35■■□□□ 1.33
MALAT1-215ENST00000619449 ZBTB3Q9H5J0 574 aa23.35■■□□□ 1.33
MALAT1-215ENST00000619449 ZNF652Q9Y2D9 606 aa23.35■■□□□ 1.33
MALAT1-215ENST00000619449 AFDNP55196 1824 aaKnown RBP23.34■■□□□ 1.33
MALAT1-215ENST00000619449 AIMP1Q12904 312 aaKnown RBP23.34■■□□□ 1.33
MALAT1-215ENST00000619449 KIF13BQ9NQT8 1826 aa23.33■■□□□ 1.33
MALAT1-215ENST00000619449 G2E3Q7L622 706 aa23.33■■□□□ 1.33
MALAT1-215ENST00000619449 PLBD2Q8NHP8 589 aa23.33■■□□□ 1.33
MALAT1-215ENST00000619449 STK31Q9BXU1 1019 aa23.33■■□□□ 1.33
MALAT1-215ENST00000619449 FHDC1Q9C0D6 1143 aaPredicted RBP23.33■■□□□ 1.33
MALAT1-215ENST00000619449 PARP3Q9Y6F1 533 aa23.33■■□□□ 1.33
MALAT1-215ENST00000619449 C10orf71Q711Q0 1435 aa23.33■■□□□ 1.32
MALAT1-215ENST00000619449 SLC4A2P04920 1241 aa23.32■■□□□ 1.32
MALAT1-215ENST00000619449 ANKRD13DQ6ZTN6 518 aa23.32■■□□□ 1.32
MALAT1-215ENST00000619449 ZNF34Q8IZ26 560 aa23.32■■□□□ 1.32
MALAT1-215ENST00000619449 PPP1R1BQ9UD71 204 aaPredicted RBP23.32■■□□□ 1.32
MALAT1-215ENST00000619449 CARMIL3Q8ND23 1372 aa23.31■■□□□ 1.32
MALAT1-215ENST00000619449 SERPINB2P05120 415 aa23.31■■□□□ 1.32
MALAT1-215ENST00000619449 CT47B1P0C2W7 299 aaPredicted RBP23.31■■□□□ 1.32
MALAT1-215ENST00000619449 BICDL1Q6ZP65 573 aa23.31■■□□□ 1.32
MALAT1-215ENST00000619449 ZNF428Q96B54 188 aa23.31■■□□□ 1.32
MALAT1-215ENST00000619449 SETDB2Q96T68 719 aa23.3■■□□□ 1.32
MALAT1-215ENST00000619449 SYT17Q9BSW7 474 aa23.3■■□□□ 1.32
MALAT1-215ENST00000619449 CD2APQ9Y5K6 639 aa23.3■■□□□ 1.32
MALAT1-215ENST00000619449 UBN2Q6ZU65 1347 aa23.3■■□□□ 1.32
MALAT1-215ENST00000619449 ANKRD36CQ5JPF3 1778 aa23.29■■□□□ 1.32
MALAT1-215ENST00000619449 ARFGEF2Q9Y6D5 1785 aa23.29■■□□□ 1.32
MALAT1-215ENST00000619449 NIP7Q9Y221 180 aaKnown RBP eCLIP23.29■■□□□ 1.32
MALAT1-215ENST00000619449 KIAA1551Q9HCM1 1747 aa23.28■■□□□ 1.32
MALAT1-215ENST00000619449 TCIRG1Q13488 830 aa23.28■■□□□ 1.32
MALAT1-215ENST00000619449 ADCY9O60503 1353 aa23.27■■□□□ 1.32
MALAT1-215ENST00000619449 FLIIQ13045 1269 aa23.27■■□□□ 1.32
MALAT1-215ENST00000619449 MRPL50Q8N5N7 158 aaKnown RBP23.27■■□□□ 1.32
MALAT1-215ENST00000619449 SSH1Q8WYL5 1049 aa23.27■■□□□ 1.32
MALAT1-215ENST00000619449 ALDH1L2Q3SY69 923 aa23.26■■□□□ 1.31
MALAT1-215ENST00000619449 PRR5LQ6MZQ0 368 aa23.26■■□□□ 1.31
MALAT1-215ENST00000619449 ISCA1Q9BUE6 129 aa23.26■■□□□ 1.31
MALAT1-215ENST00000619449 IBTKQ9P2D0 1353 aaPredicted RBP23.26■■□□□ 1.31
MALAT1-215ENST00000619449 HSP90AB3PQ58FF7 597 aa23.25■■□□□ 1.31
MALAT1-215ENST00000619449 KSR2Q6VAB6 950 aa23.25■■□□□ 1.31
MALAT1-215ENST00000619449 PI4KAP2A4QPH2 592 aa23.24■■□□□ 1.31
MALAT1-215ENST00000619449 GPTP24298 496 aa23.24■■□□□ 1.31
MALAT1-215ENST00000619449 TRIM28Q13263 835 aaKnown RBP23.24■■□□□ 1.31
MALAT1-215ENST00000619449 PI4KAP1Q8N8J0 262 aa23.24■■□□□ 1.31
MALAT1-215ENST00000619449 NLGN2Q8NFZ4 835 aa23.24■■□□□ 1.31
MALAT1-215ENST00000619449 DDX58O95786 925 aaKnown RBP23.23■■□□□ 1.31
MALAT1-215ENST00000619449 BRPF1P55201 1214 aaPredicted RBP23.23■■□□□ 1.31
MALAT1-215ENST00000619449 PARP10Q53GL7 1025 aa23.23■■□□□ 1.31
MALAT1-215ENST00000619449 SUSD4Q5VX71 490 aa23.23■■□□□ 1.31
MALAT1-215ENST00000619449 RIC3Q7Z5B4 369 aa23.23■■□□□ 1.31
MALAT1-215ENST00000619449 NLRP10Q86W26 655 aa23.23■■□□□ 1.31
MALAT1-215ENST00000619449 ANKRD31Q8N7Z5 1873 aa23.23■■□□□ 1.31
MALAT1-215ENST00000619449 PXDNLA1KZ92 1463 aa23.23■■□□□ 1.31
MALAT1-215ENST00000619449 NTSR2O95665 410 aa23.22■■□□□ 1.31
MALAT1-215ENST00000619449 RARSP54136 660 aaKnown RBP23.22■■□□□ 1.31
MALAT1-215ENST00000619449 METTL22Q9BUU2 404 aaPredicted RBP23.22■■□□□ 1.31
MALAT1-215ENST00000619449 MAP3K2Q9Y2U5 619 aa23.22■■□□□ 1.31
MALAT1-215ENST00000619449 TGFB2P61812 414 aa23.21■■□□□ 1.31
MALAT1-215ENST00000619449 NBPF5PQ86XG9 351 aaPredicted RBP23.21■■□□□ 1.31
MALAT1-215ENST00000619449 CNBD1Q8NA66 436 aa23.21■■□□□ 1.31
MALAT1-215ENST00000619449 TPTE2Q6XPS3 522 aa23.2■■□□□ 1.3
MALAT1-215ENST00000619449 RIC1Q4ADV7 1423 aa23.19■■□□□ 1.3
MALAT1-215ENST00000619449 KCNA3P22001 575 aa23.19■■□□□ 1.3
MALAT1-215ENST00000619449 FKBP5Q13451 457 aaPredicted RBP23.19■■□□□ 1.3
MALAT1-215ENST00000619449 KLHL34Q8N239 644 aa23.19■■□□□ 1.3
MALAT1-215ENST00000619449 BRIP1Q9BX63 1249 aa23.19■■□□□ 1.3
MALAT1-215ENST00000619449 ABCC12Q96J65 1359 aa23.18■■□□□ 1.3
MALAT1-215ENST00000619449 KLRG2A4D1S0 409 aaPredicted RBP23.18■■□□□ 1.3
MALAT1-215ENST00000619449 ATP5J2-PTCD1G3V325 749 aa23.18■■□□□ 1.3
MALAT1-215ENST00000619449 IGKV5-2P06315 115 aa23.18■■□□□ 1.3
MALAT1-215ENST00000619449 CCDC24Q8N4L8 307 aa23.18■■□□□ 1.3
MALAT1-215ENST00000619449 MYD88Q99836 296 aa23.18■■□□□ 1.3
MALAT1-215ENST00000619449 BCL2L13Q9BXK5 485 aa23.18■■□□□ 1.3
MALAT1-215ENST00000619449 NYXQ9GZU5 481 aa23.18■■□□□ 1.3
MALAT1-215ENST00000619449 N4BP2Q86UW6 1770 aaPredicted RBP23.17■■□□□ 1.3
MALAT1-215ENST00000619449 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
MALAT1-215ENST00000619449 FAM177BA6PVY3 158 aa23.17■■□□□ 1.3
MALAT1-215ENST00000619449 PPP1R42Q7Z4L9 355 aa23.17■■□□□ 1.3
MALAT1-215ENST00000619449 DNAAF4Q8WXU2 420 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms