RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 ZNF652Q9Y2D9 606 aa28.7■■■□□ 2.18
TRAF4-217ENST00000618771 CLEC4GQ6UXB4 293 aa28.69■■■□□ 2.18
TRAF4-217ENST00000618771 RBM46Q8TBY0 533 aaKnown RBP28.69■■■□□ 2.18
TRAF4-217ENST00000618771 BABAM1Q9NWV8 329 aa28.69■■■□□ 2.18
TRAF4-217ENST00000618771 NUP98P52948 1817 aa28.69■■■□□ 2.18
TRAF4-217ENST00000618771 PRR5LQ6MZQ0 368 aa28.68■■■□□ 2.18
TRAF4-217ENST00000618771 COL11A2P13942 1736 aaPredicted RBP28.68■■■□□ 2.18
TRAF4-217ENST00000618771 KDM2BQ8NHM5 1336 aa28.68■■■□□ 2.18
TRAF4-217ENST00000618771 C2CD5Q86YS7 1000 aa28.67■■■□□ 2.18
TRAF4-217ENST00000618771 CNBD1Q8NA66 436 aa28.67■■■□□ 2.18
TRAF4-217ENST00000618771 SBF1O95248 1867 aa28.67■■■□□ 2.18
TRAF4-217ENST00000618771 RGL2O15211 777 aa28.66■■■□□ 2.18
TRAF4-217ENST00000618771 NPHP1O15259 732 aa28.66■■■□□ 2.18
TRAF4-217ENST00000618771 TRIM35Q9UPQ4 493 aa28.66■■■□□ 2.18
TRAF4-217ENST00000618771 ZNF316A6NFI3 1004 aaPredicted RBP28.65■■■□□ 2.18
TRAF4-217ENST00000618771 H0YIN7 160 aa28.65■■■□□ 2.18
TRAF4-217ENST00000618771 CCDC24Q8N4L8 307 aa28.65■■■□□ 2.18
TRAF4-217ENST00000618771 BRIP1Q9BX63 1249 aa28.65■■■□□ 2.18
TRAF4-217ENST00000618771 NGEFQ8N5V2 710 aa28.64■■■□□ 2.18
TRAF4-217ENST00000618771 RRAGCQ9HB90 399 aa28.64■■■□□ 2.18
TRAF4-217ENST00000618771 CACNA1SQ13698 1873 aa28.63■■■□□ 2.17
TRAF4-217ENST00000618771 PDE6BP35913 854 aa28.63■■■□□ 2.17
TRAF4-217ENST00000618771 ERBB4Q15303 1308 aa28.63■■■□□ 2.17
TRAF4-217ENST00000618771 WDR90Q96KV7 1748 aa28.63■■■□□ 2.17
TRAF4-217ENST00000618771 ST5P78524 1137 aa28.62■■■□□ 2.17
TRAF4-217ENST00000618771 RASSF7Q02833 373 aa28.62■■■□□ 2.17
TRAF4-217ENST00000618771 PDZRN3Q9UPQ7 1066 aa28.62■■■□□ 2.17
TRAF4-217ENST00000618771 MYL6BP14649 208 aa28.61■■■□□ 2.17
TRAF4-217ENST00000618771 HTRA3P83110 453 aa28.61■■■□□ 2.17
TRAF4-217ENST00000618771 FSTL1Q12841 308 aa28.61■■■□□ 2.17
TRAF4-217ENST00000618771 NBPF5PQ86XG9 351 aaPredicted RBP28.61■■■□□ 2.17
TRAF4-217ENST00000618771 TTLL6Q8N841 843 aa28.61■■■□□ 2.17
TRAF4-217ENST00000618771 NIP7Q9Y221 180 aaKnown RBP eCLIP28.61■■■□□ 2.17
TRAF4-217ENST00000618771 HLFQ16534 295 aa28.6■■■□□ 2.17
TRAF4-217ENST00000618771 CHL1O00533 1208 aa28.59■■■□□ 2.17
TRAF4-217ENST00000618771 KIF6Q6ZMV9 814 aa28.59■■■□□ 2.17
TRAF4-217ENST00000618771 LAS1LQ9Y4W2 734 aaKnown RBP28.59■■■□□ 2.17
TRAF4-217ENST00000618771 MAP3K15Q6ZN16 1313 aa28.59■■■□□ 2.17
TRAF4-217ENST00000618771 ARFGEF2Q9Y6D5 1785 aa28.58■■■□□ 2.17
TRAF4-217ENST00000618771 CCDC88AQ3V6T2 1871 aa28.58■■■□□ 2.17
TRAF4-217ENST00000618771 ERVV-1B6SEH8 477 aa28.58■■■□□ 2.17
TRAF4-217ENST00000618771 EIF2S2P20042 333 aaKnown RBP28.58■■■□□ 2.17
TRAF4-217ENST00000618771 TNRC6CQ9HCJ0 1690 aaKnown RBP28.58■■■□□ 2.16
TRAF4-217ENST00000618771 TTLL7Q6ZT98 887 aa28.57■■■□□ 2.16
TRAF4-217ENST00000618771 ZNF622Q969S3 477 aaKnown RBP eCLIP28.57■■■□□ 2.16
TRAF4-217ENST00000618771 APAF1O14727 1248 aa28.56■■■□□ 2.16
TRAF4-217ENST00000618771 CCDC184Q52MB2 194 aa28.55■■■□□ 2.16
TRAF4-217ENST00000618771 TPTE2Q6XPS3 522 aa28.55■■■□□ 2.16
TRAF4-217ENST00000618771 LMNB1P20700 586 aa28.54■■■□□ 2.16
TRAF4-217ENST00000618771 KLRG1Q96E93 195 aa28.54■■■□□ 2.16
TRAF4-217ENST00000618771 SLX4Q8IY92 1834 aa28.54■■■□□ 2.16
TRAF4-217ENST00000618771 ZC3H4Q9UPT8 1303 aaKnown RBP28.53■■■□□ 2.16
TRAF4-217ENST00000618771 FAM177BA6PVY3 158 aa28.53■■■□□ 2.16
TRAF4-217ENST00000618771 PRELPP51888 382 aa28.53■■■□□ 2.16
TRAF4-217ENST00000618771 PDIA6Q15084 440 aa28.53■■■□□ 2.16
TRAF4-217ENST00000618771 ZBTB3Q9H5J0 574 aa28.53■■■□□ 2.16
TRAF4-217ENST00000618771 SRGNP10124 158 aa28.52■■■□□ 2.16
TRAF4-217ENST00000618771 KRT24Q2M2I5 525 aa28.52■■■□□ 2.16
TRAF4-217ENST00000618771 LRP10Q7Z4F1 713 aa28.52■■■□□ 2.16
TRAF4-217ENST00000618771 CFAP44Q96MT7 982 aa28.52■■■□□ 2.16
TRAF4-217ENST00000618771 FER1L6Q2WGJ9 1857 aa28.52■■■□□ 2.16
TRAF4-217ENST00000618771 ANP32CO43423 234 aa28.51■■■□□ 2.15
TRAF4-217ENST00000618771 PROSER3Q2NL68 480 aa28.51■■■□□ 2.15
TRAF4-217ENST00000618771 STYK1Q6J9G0 422 aa28.51■■■□□ 2.15
TRAF4-217ENST00000618771 SMC1BQ8NDV3 1235 aa28.51■■■□□ 2.15
TRAF4-217ENST00000618771 NECTIN2Q92692 538 aa28.51■■■□□ 2.15
TRAF4-217ENST00000618771 ANKRD36CQ5JPF3 1778 aa28.5■■■□□ 2.15
TRAF4-217ENST00000618771 ANXA1P04083 346 aa28.5■■■□□ 2.15
TRAF4-217ENST00000618771 MASTLQ96GX5 879 aa28.5■■■□□ 2.15
TRAF4-217ENST00000618771 GLTPD2A6NH11 291 aa28.49■■■□□ 2.15
TRAF4-217ENST00000618771 CNKSR1Q969H4 720 aa28.49■■■□□ 2.15
TRAF4-217ENST00000618771 GTF2E1P29083 439 aaPredicted RBP28.48■■■□□ 2.15
TRAF4-217ENST00000618771 NYXQ9GZU5 481 aa28.48■■■□□ 2.15
TRAF4-217ENST00000618771 TIAM2Q8IVF5 1701 aa28.47■■■□□ 2.15
TRAF4-217ENST00000618771 NFKBIEO00221 500 aa28.47■■■□□ 2.15
TRAF4-217ENST00000618771 VEGFAP15692 232 aaPredicted RBP28.47■■■□□ 2.15
TRAF4-217ENST00000618771 GPTP24298 496 aa28.47■■■□□ 2.15
TRAF4-217ENST00000618771 CALD1Q05682 793 aaKnown RBP28.47■■■□□ 2.15
TRAF4-217ENST00000618771 GIGYF2Q6Y7W6 1299 aaKnown RBP28.47■■■□□ 2.15
TRAF4-217ENST00000618771 MBIPQ9NS73 344 aa28.47■■■□□ 2.15
TRAF4-217ENST00000618771 IBTKQ9P2D0 1353 aaPredicted RBP28.47■■■□□ 2.15
TRAF4-217ENST00000618771 UBN2Q6ZU65 1347 aa28.46■■■□□ 2.15
TRAF4-217ENST00000618771 DICER1Q9UPY3 1922 aaKnown RBP28.46■■■□□ 2.15
TRAF4-217ENST00000618771 C21orf2O43822 256 aa28.46■■■□□ 2.15
TRAF4-217ENST00000618771 HOXB7P09629 217 aa28.46■■■□□ 2.15
TRAF4-217ENST00000618771 PRPF40BQ6NWY9 871 aaKnown RBP28.46■■■□□ 2.15
TRAF4-217ENST00000618771 JMYQ8N9B5 988 aa28.46■■■□□ 2.15
TRAF4-217ENST00000618771 ZNF219Q9P2Y4 722 aaPredicted RBP28.46■■■□□ 2.15
TRAF4-217ENST00000618771 KLRG2A4D1S0 409 aaPredicted RBP28.45■■■□□ 2.14
TRAF4-217ENST00000618771 ZNF853P0CG23 659 aa28.45■■■□□ 2.14
TRAF4-217ENST00000618771 ZNF34Q8IZ26 560 aa28.45■■■□□ 2.14
TRAF4-217ENST00000618771 MRS2Q9HD23 443 aa28.45■■■□□ 2.14
TRAF4-217ENST00000618771 DDX21Q9NR30 783 aaKnown RBP eCLIP28.45■■■□□ 2.14
TRAF4-217ENST00000618771 IFT57Q9NWB7 429 aa28.45■■■□□ 2.14
TRAF4-217ENST00000618771 ABCC12Q96J65 1359 aa28.45■■■□□ 2.14
TRAF4-217ENST00000618771 NPR1P16066 1061 aa28.44■■■□□ 2.14
TRAF4-217ENST00000618771 HDGFL1Q5TGJ6 251 aa28.44■■■□□ 2.14
TRAF4-217ENST00000618771 NUTM1Q86Y26 1132 aa28.44■■■□□ 2.14
TRAF4-217ENST00000618771 PCNTO95613 3336 aa28.44■■■□□ 2.14
TRAF4-217ENST00000618771 GNAI1P63096 354 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms