RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 PNMA6EA0A0J9YXQ4 647 aa15.71■□□□□ 0.11
CLTCL1-210ENST00000617926 ONECUT3O60422 494 aaPredicted RBP15.71■□□□□ 0.11
CLTCL1-210ENST00000617926 NEK4P51957 841 aa15.71■□□□□ 0.11
CLTCL1-210ENST00000617926 LRSAM1Q6UWE0 723 aa15.71■□□□□ 0.11
CLTCL1-210ENST00000617926 WDR17Q8IZU2 1322 aa15.7■□□□□ 0.1
CLTCL1-210ENST00000617926 PRIM1P49642 420 aaKnown RBP15.7■□□□□ 0.1
CLTCL1-210ENST00000617926 ERBB3P21860 1342 aa15.7■□□□□ 0.1
CLTCL1-210ENST00000617926 GNAT3A8MTJ3 354 aa15.7■□□□□ 0.1
CLTCL1-210ENST00000617926 RRP9O43818 475 aaKnown RBP15.7■□□□□ 0.1
CLTCL1-210ENST00000617926 NCLP19338 710 aaKnown RBP15.7■□□□□ 0.1
CLTCL1-210ENST00000617926 FKBP5Q13451 457 aaPredicted RBP15.7■□□□□ 0.1
CLTCL1-210ENST00000617926 SEPT12Q8IYM1 358 aa15.7■□□□□ 0.1
CLTCL1-210ENST00000617926 TMEM63CQ9P1W3 806 aa15.7■□□□□ 0.1
CLTCL1-210ENST00000617926 PALD1Q9ULE6 856 aa15.7■□□□□ 0.1
CLTCL1-210ENST00000617926 PARP4Q9UKK3 1724 aaKnown RBP15.69■□□□□ 0.1
CLTCL1-210ENST00000617926 OFD1O75665 1012 aa15.69■□□□□ 0.1
CLTCL1-210ENST00000617926 AMPHP49418 695 aa15.69■□□□□ 0.1
CLTCL1-210ENST00000617926 TERF1P54274 439 aa15.69■□□□□ 0.1
CLTCL1-210ENST00000617926 SSH3Q8TE77 659 aa15.69■□□□□ 0.1
CLTCL1-210ENST00000617926 RBM27Q9P2N5 1060 aaKnown RBP15.69■□□□□ 0.1
CLTCL1-210ENST00000617926 TSHZ3Q63HK5 1081 aa15.68■□□□□ 0.1
CLTCL1-210ENST00000617926 NOL7Q9UMY1 257 aaKnown RBP15.68■□□□□ 0.1
CLTCL1-210ENST00000617926 LRRFIP2Q9Y608 721 aaKnown RBP15.68■□□□□ 0.1
CLTCL1-210ENST00000617926 ZNF500O60304 480 aaPredicted RBP15.67■□□□□ 0.1
CLTCL1-210ENST00000617926 RAB11FIP3O75154 756 aa15.67■□□□□ 0.1
CLTCL1-210ENST00000617926 HOXC9P31274 260 aa15.67■□□□□ 0.1
CLTCL1-210ENST00000617926 TOM1L2Q6ZVM7 507 aa15.67■□□□□ 0.1
CLTCL1-210ENST00000617926 IP6K1Q92551 441 aa15.67■□□□□ 0.1
CLTCL1-210ENST00000617926 MSNP26038 577 aaKnown RBP15.67■□□□□ 0.1
CLTCL1-210ENST00000617926 POLA2Q14181 598 aa15.67■□□□□ 0.1
CLTCL1-210ENST00000617926 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.67■□□□□ 0.1
CLTCL1-210ENST00000617926 USP44Q9H0E7 712 aa15.67■□□□□ 0.1
CLTCL1-210ENST00000617926 ANO2Q9NQ90 1003 aa15.67■□□□□ 0.1
CLTCL1-210ENST00000617926 A0A0G2JS52 829 aa15.66■□□□□ 0.1
CLTCL1-210ENST00000617926 CSB-PGBD3P0DP91 1061 aa15.66■□□□□ 0.1
CLTCL1-210ENST00000617926 HSPA4P34932 840 aa15.66■□□□□ 0.1
CLTCL1-210ENST00000617926 ANKRD24Q8TF21 1146 aa15.66■□□□□ 0.1
CLTCL1-210ENST00000617926 NSFL1CQ9UNZ2 370 aaKnown RBP15.66■□□□□ 0.1
CLTCL1-210ENST00000617926 CEMIPQ8WUJ3 1361 aa15.66■□□□□ 0.1
CLTCL1-210ENST00000617926 UBTFL1P0CB47 393 aaPredicted RBP15.65■□□□□ 0.1
CLTCL1-210ENST00000617926 MCM5P33992 734 aa15.65■□□□□ 0.1
CLTCL1-210ENST00000617926 TAF7Q15545 349 aaPredicted RBP15.65■□□□□ 0.1
CLTCL1-210ENST00000617926 BARGINQ6ZT62 677 aa15.65■□□□□ 0.1
CLTCL1-210ENST00000617926 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
CLTCL1-210ENST00000617926 TRIM6-TRIM34B2RNG4 842 aa15.64■□□□□ 0.09
CLTCL1-210ENST00000617926 TMEM87AQ8NBN3 555 aa15.64■□□□□ 0.09
CLTCL1-210ENST00000617926 RILPL2Q969X0 211 aa15.64■□□□□ 0.09
CLTCL1-210ENST00000617926 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.64■□□□□ 0.09
CLTCL1-210ENST00000617926 RAD50Q92878 1312 aa15.64■□□□□ 0.09
CLTCL1-210ENST00000617926 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
CLTCL1-210ENST00000617926 DISP2A7MBM2 1401 aa15.64■□□□□ 0.09
CLTCL1-210ENST00000617926 SYCE3A1L190 88 aa15.63■□□□□ 0.09
CLTCL1-210ENST00000617926 LTV1Q96GA3 475 aaPredicted RBP15.63■□□□□ 0.09
CLTCL1-210ENST00000617926 CHAMP1Q96JM3 812 aa15.63■□□□□ 0.09
CLTCL1-210ENST00000617926 CARD10Q9BWT7 1032 aa15.63■□□□□ 0.09
CLTCL1-210ENST00000617926 THRAP3Q9Y2W1 955 aaKnown RBP15.63■□□□□ 0.09
CLTCL1-210ENST00000617926 HOXB7P09629 217 aa15.63■□□□□ 0.09
CLTCL1-210ENST00000617926 KIAA1211Q6ZU35 1233 aa15.63■□□□□ 0.09
CLTCL1-210ENST00000617926 PI4K2BQ8TCG2 481 aa15.63■□□□□ 0.09
CLTCL1-210ENST00000617926 SYAP1Q96A49 352 aaPredicted RBP15.63■□□□□ 0.09
CLTCL1-210ENST00000617926 RPAP1Q9BWH6 1393 aaPredicted RBP15.63■□□□□ 0.09
CLTCL1-210ENST00000617926 WDR33Q9C0J8 1336 aaKnown RBP15.62■□□□□ 0.09
CLTCL1-210ENST00000617926 HSP90AA2PQ14568 343 aaPredicted RBP15.62■□□□□ 0.09
CLTCL1-210ENST00000617926 KRT27Q7Z3Y8 459 aa15.62■□□□□ 0.09
CLTCL1-210ENST00000617926 UPF1Q92900 1129 aaKnown RBP eCLIP15.62■□□□□ 0.09
CLTCL1-210ENST00000617926 IL25Q9H293 177 aa15.62■□□□□ 0.09
CLTCL1-210ENST00000617926 ZKSCAN5Q9Y2L8 839 aa15.62■□□□□ 0.09
CLTCL1-210ENST00000617926 TCHHQ07283 1943 aa15.61■□□□□ 0.09
CLTCL1-210ENST00000617926 SGSM2O43147 1006 aa15.61■□□□□ 0.09
CLTCL1-210ENST00000617926 FAM182BQ5T319 152 aa15.61■□□□□ 0.09
CLTCL1-210ENST00000617926 NLRP2Q9NX02 1062 aa15.61■□□□□ 0.09
CLTCL1-210ENST00000617926 HDGFL1Q5TGJ6 251 aa15.6■□□□□ 0.09
CLTCL1-210ENST00000617926 TTC14Q96N46 770 aa15.6■□□□□ 0.09
CLTCL1-210ENST00000617926 TSPY26PQ9H489 355 aa15.6■□□□□ 0.09
CLTCL1-210ENST00000617926 CCDC39Q9UFE4 941 aa15.6■□□□□ 0.09
CLTCL1-210ENST00000617926 PHF14O94880 888 aa15.6■□□□□ 0.09
CLTCL1-210ENST00000617926 PPP1R42Q7Z4L9 355 aa15.6■□□□□ 0.09
CLTCL1-210ENST00000617926 KLHL34Q8N239 644 aa15.6■□□□□ 0.09
CLTCL1-210ENST00000617926 RHPN1Q8TCX5 695 aa15.6■□□□□ 0.09
CLTCL1-210ENST00000617926 KIF1BPQ96EK5 621 aa15.6■□□□□ 0.09
CLTCL1-210ENST00000617926 SHANK3Q9BYB0 1731 aa15.59■□□□□ 0.09
CLTCL1-210ENST00000617926 FOXD4L5Q5VV16 416 aaPredicted RBP15.59■□□□□ 0.09
CLTCL1-210ENST00000617926 FOXD4L4Q8WXT5 416 aaPredicted RBP15.59■□□□□ 0.09
CLTCL1-210ENST00000617926 NECTIN2Q92692 538 aa15.59■□□□□ 0.09
CLTCL1-210ENST00000617926 UPF3BQ9BZI7 483 aaKnown RBP15.59■□□□□ 0.09
CLTCL1-210ENST00000617926 LSG1Q9H089 658 aaKnown RBP15.59■□□□□ 0.09
CLTCL1-210ENST00000617926 OVOS2A0A0G2JMS6 1433 aa15.58■□□□□ 0.09
CLTCL1-210ENST00000617926 CHMP4AQ9BY43 222 aa15.58■□□□□ 0.08
CLTCL1-210ENST00000617926 IL1RAPL2Q9NP60 686 aa15.58■□□□□ 0.08
CLTCL1-210ENST00000617926 SIPA1L3O60292 1781 aaPredicted RBP15.58■□□□□ 0.08
CLTCL1-210ENST00000617926 NUTM1Q86Y26 1132 aa15.57■□□□□ 0.08
CLTCL1-210ENST00000617926 CNTROBQ8N137 903 aa15.57■□□□□ 0.08
CLTCL1-210ENST00000617926 PHAXQ9H814 394 aaKnown RBP15.57■□□□□ 0.08
CLTCL1-210ENST00000617926 SNX14Q9Y5W7 946 aa15.57■□□□□ 0.08
CLTCL1-210ENST00000617926 TNS1Q9HBL0 1735 aaKnown RBP15.57■□□□□ 0.08
CLTCL1-210ENST00000617926 TTC41PQ6P2S7 1318 aa15.57■□□□□ 0.08
CLTCL1-210ENST00000617926 SBF2Q86WG5 1849 aa15.57■□□□□ 0.08
CLTCL1-210ENST00000617926 NCAPD2Q15021 1401 aa15.57■□□□□ 0.08
CLTCL1-210ENST00000617926 MEGF6O75095 1541 aa15.57■□□□□ 0.08
CLTCL1-210ENST00000617926 SURF6O75683 361 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms