RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 METTL22Q9BUU2 404 aaPredicted RBP4.23□□□□□ -1.73
LIG4-205ENST00000614526 CCDC8Q9H0W5 538 aaPredicted RBP4.23□□□□□ -1.73
LIG4-205ENST00000614526 LRP10Q7Z4F1 713 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 SYNE4Q8N205 404 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 TBC1D2BQ9UPU7 963 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 FAM208AQ9UK61 1670 aaKnown RBP4.23□□□□□ -1.73
LIG4-205ENST00000614526 ALDH1L1O75891 902 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 SLC4A9Q96Q91 983 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 TBC1D2Q9BYX2 928 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 NDUFB9Q9Y6M9 179 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 LMO7Q8WWI1 1683 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 ROBO1Q9Y6N7 1651 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 IBTKQ9P2D0 1353 aaPredicted RBP4.23□□□□□ -1.73
LIG4-205ENST00000614526 G3BP1Q13283 466 aaKnown RBP eCLIP4.22□□□□□ -1.73
LIG4-205ENST00000614526 NKX1-1Q15270 411 aaPredicted RBP4.22□□□□□ -1.73
LIG4-205ENST00000614526 LMBR1LQ6UX01 489 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 PTF1AQ7RTS3 328 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 POLA2Q14181 598 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 AACSQ86V21 672 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 MARCH10Q8NA82 808 aaPredicted RBP4.22□□□□□ -1.73
LIG4-205ENST00000614526 FAM89AQ96GI7 184 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 ZNF594Q96JF6 807 aaPredicted RBP4.22□□□□□ -1.73
LIG4-205ENST00000614526 ZBTB1Q9Y2K1 713 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 IFIT2P09913 472 aaKnown RBP4.22□□□□□ -1.73
LIG4-205ENST00000614526 BECN1Q14457 450 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 HLFQ16534 295 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 NOL8Q76FK4 1167 aaKnown RBP4.22□□□□□ -1.73
LIG4-205ENST00000614526 CLASRPQ8N2M8 674 aaKnown RBP4.22□□□□□ -1.73
LIG4-205ENST00000614526 PLBD2Q8NHP8 589 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 KIF1BPQ96EK5 621 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 TLR7Q9NYK1 1049 aaKnown RBP4.22□□□□□ -1.73
LIG4-205ENST00000614526 KDM3BQ7LBC6 1761 aa4.22□□□□□ -1.73
LIG4-205ENST00000614526 SASH1O94885 1247 aa4.21□□□□□ -1.73
LIG4-205ENST00000614526 CD2BP2O95400 341 aaKnown RBP4.21□□□□□ -1.73
LIG4-205ENST00000614526 EDC3Q96F86 508 aaKnown RBP4.21□□□□□ -1.73
LIG4-205ENST00000614526 IL25Q9H293 177 aa4.21□□□□□ -1.73
LIG4-205ENST00000614526 BOLA2Q9H3K6 86 aa4.21□□□□□ -1.73
LIG4-205ENST00000614526 ANO2Q9NQ90 1003 aa4.21□□□□□ -1.73
LIG4-205ENST00000614526 SPATA31A1Q5TZJ5 1347 aa4.21□□□□□ -1.73
LIG4-205ENST00000614526 STARD3NLO95772 234 aa4.21□□□□□ -1.74
LIG4-205ENST00000614526 ATP6V1AP38606 617 aa4.21□□□□□ -1.74
LIG4-205ENST00000614526 MEX3CQ5U5Q3 659 aaKnown RBP4.21□□□□□ -1.74
LIG4-205ENST00000614526 CASC1Q6TDU7 716 aa4.21□□□□□ -1.74
LIG4-205ENST00000614526 EAF2Q96CJ1 260 aaPredicted RBP4.21□□□□□ -1.74
LIG4-205ENST00000614526 RAB11FIP3O75154 756 aa4.21□□□□□ -1.74
LIG4-205ENST00000614526 CWC27Q6UX04 472 aaKnown RBP4.21□□□□□ -1.74
LIG4-205ENST00000614526 NEUROD6Q96NK8 337 aa4.21□□□□□ -1.74
LIG4-205ENST00000614526 CWC25Q9NXE8 425 aaPredicted RBP4.21□□□□□ -1.74
LIG4-205ENST00000614526 CRYBG1Q9Y4K1 1723 aa4.21□□□□□ -1.74
LIG4-205ENST00000614526 LTBP4Q8N2S1 1624 aa4.21□□□□□ -1.74
LIG4-205ENST00000614526 DTNBO60941 627 aa4.21□□□□□ -1.74
LIG4-205ENST00000614526 HSP90AA1P07900 732 aaKnown RBP4.21□□□□□ -1.74
LIG4-205ENST00000614526 TFCP2Q12800 502 aa4.21□□□□□ -1.74
LIG4-205ENST00000614526 KIF6Q6ZMV9 814 aa4.21□□□□□ -1.74
LIG4-205ENST00000614526 SCN11AQ9UI33 1791 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 FRAT2O75474 233 aaPredicted RBP4.2□□□□□ -1.74
LIG4-205ENST00000614526 CHGBP05060 677 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 TIMM10P62072 90 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 HSCBQ8IWL3 235 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 PI4K2BQ8TCG2 481 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 KIF2CQ99661 725 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 USP26Q9BXU7 913 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 PUS3Q9BZE2 481 aaKnown RBP4.2□□□□□ -1.74
LIG4-205ENST00000614526 USP21Q9UK80 565 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 SALL3Q9BXA9 1300 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 VIRMAQ69YN4 1812 aaKnown RBP4.2□□□□□ -1.74
LIG4-205ENST00000614526 ERC2O15083 957 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 CYP19A1P11511 503 aaPredicted RBP4.2□□□□□ -1.74
LIG4-205ENST00000614526 CHMLP26374 656 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 HSPA1LP34931 641 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 PTPN12Q05209 780 aaKnown RBP4.2□□□□□ -1.74
LIG4-205ENST00000614526 LRRC24Q50LG9 513 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 HSP90AB4PQ58FF6 505 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 BICDL1Q6ZP65 573 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 LARP6Q9BRS8 491 aaKnown RBP4.2□□□□□ -1.74
LIG4-205ENST00000614526 SPATA31A5Q5VU36 1347 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 SPATA31A7Q8IWB4 1347 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 EP400Q96L91 3159 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 NHSL1Q5SYE7 1610 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 C5P01031 1676 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 RBM25P49756 843 aaKnown RBP4.2□□□□□ -1.74
LIG4-205ENST00000614526 TCIRG1Q13488 830 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 MTX1Q13505 466 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 NFKBIBQ15653 356 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 DZIP3Q86Y13 1208 aaKnown RBP4.2□□□□□ -1.74
LIG4-205ENST00000614526 DNAJC2Q99543 621 aaKnown RBP4.2□□□□□ -1.74
LIG4-205ENST00000614526 OSBPL3Q9H4L5 887 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 HDAC5Q9UQL6 1122 aa4.2□□□□□ -1.74
LIG4-205ENST00000614526 PXDNLA1KZ92 1463 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 LOC102724428A0A0B4J2F2 783 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 H7C1W4 665 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 SIK1P57059 783 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 FOXO4P98177 505 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 ITPK1Q13572 414 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 SLFNL1Q499Z3 407 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 TAF7LQ5H9L4 462 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 CCDC24Q8N4L8 307 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 DBNDD2Q9BQY9 259 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 ESYT1Q9BSJ8 1104 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 UPF3BQ9BZI7 483 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms