RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ZBTB3Q9H5J0 574 aa22.13■■□□□ 1.13
SREK1-216ENST00000612404 NEXNQ0ZGT2 675 aa22.12■■□□□ 1.13
SREK1-216ENST00000612404 MYD88Q99836 296 aa22.11■■□□□ 1.13
SREK1-216ENST00000612404 METTL22Q9BUU2 404 aaPredicted RBP22.11■■□□□ 1.13
SREK1-216ENST00000612404 N4BP2Q86UW6 1770 aaPredicted RBP22.11■■□□□ 1.13
SREK1-216ENST00000612404 ATP10DQ9P241 1426 aa22.11■■□□□ 1.13
SREK1-216ENST00000612404 CNTNAP4Q9C0A0 1308 aa22.11■■□□□ 1.13
SREK1-216ENST00000612404 ARFGEF2Q9Y6D5 1785 aa22.11■■□□□ 1.13
SREK1-216ENST00000612404 MEIS3Q99687 375 aa22.1■■□□□ 1.13
SREK1-216ENST00000612404 LRRC4BQ9NT99 713 aa22.1■■□□□ 1.13
SREK1-216ENST00000612404 RREB1Q92766 1687 aa22.1■■□□□ 1.13
SREK1-216ENST00000612404 EIF5P55010 431 aaKnown RBP22.1■■□□□ 1.13
SREK1-216ENST00000612404 SLC27A3Q5K4L6 730 aa22.1■■□□□ 1.13
SREK1-216ENST00000612404 CWF19L2Q2TBE0 894 aaKnown RBP22.09■■□□□ 1.13
SREK1-216ENST00000612404 LINS1Q8NG48 757 aa22.09■■□□□ 1.13
SREK1-216ENST00000612404 C1orf115Q9H7X2 142 aa22.09■■□□□ 1.13
SREK1-216ENST00000612404 TAF1LQ8IZX4 1826 aa22.09■■□□□ 1.13
SREK1-216ENST00000612404 DZIP3Q86Y13 1208 aaKnown RBP22.09■■□□□ 1.13
SREK1-216ENST00000612404 TBC1D2BQ9UPU7 963 aa22.09■■□□□ 1.13
SREK1-216ENST00000612404 RC3H1Q5TC82 1133 aaKnown RBP22.08■■□□□ 1.13
SREK1-216ENST00000612404 PCDHB15Q9Y5E8 787 aa22.08■■□□□ 1.13
SREK1-216ENST00000612404 ALDH1L1O75891 902 aa22.07■■□□□ 1.12
SREK1-216ENST00000612404 MAP3K15Q6ZN16 1313 aa22.07■■□□□ 1.12
SREK1-216ENST00000612404 NUP188Q5SRE5 1749 aa22.07■■□□□ 1.12
SREK1-216ENST00000612404 PLSCR1O15162 318 aa22.07■■□□□ 1.12
SREK1-216ENST00000612404 GNPATO15228 680 aa22.07■■□□□ 1.12
SREK1-216ENST00000612404 IGKV5-2P06315 115 aa22.07■■□□□ 1.12
SREK1-216ENST00000612404 TXNRD1Q16881 649 aa22.07■■□□□ 1.12
SREK1-216ENST00000612404 TNS1Q9HBL0 1735 aaKnown RBP22.06■■□□□ 1.12
SREK1-216ENST00000612404 ATP5J2-PTCD1G3V325 749 aa22.06■■□□□ 1.12
SREK1-216ENST00000612404 USP44Q9H0E7 712 aa22.06■■□□□ 1.12
SREK1-216ENST00000612404 COL15A1P39059 1388 aa22.06■■□□□ 1.12
SREK1-216ENST00000612404 NEURL1BA8MQ27 555 aa22.06■■□□□ 1.12
SREK1-216ENST00000612404 GNAI3P08754 354 aa22.06■■□□□ 1.12
SREK1-216ENST00000612404 C4BP0C0L5 1744 aa22.05■■□□□ 1.12
SREK1-216ENST00000612404 AK7Q96M32 723 aa22.05■■□□□ 1.12
SREK1-216ENST00000612404 C9orf78Q9NZ63 289 aaPredicted RBP22.05■■□□□ 1.12
SREK1-216ENST00000612404 PROM2Q8N271 834 aa22.04■■□□□ 1.12
SREK1-216ENST00000612404 RPS6KA4O75676 772 aa22.04■■□□□ 1.12
SREK1-216ENST00000612404 UBTFL1P0CB47 393 aaPredicted RBP22.04■■□□□ 1.12
SREK1-216ENST00000612404 RTCBQ9Y3I0 505 aaKnown RBP22.04■■□□□ 1.12
SREK1-216ENST00000612404 HLFQ16534 295 aa22.03■■□□□ 1.12
SREK1-216ENST00000612404 SMIM5Q71RC9 77 aa22.03■■□□□ 1.12
SREK1-216ENST00000612404 A0A087WZG4 1122 aa22.03■■□□□ 1.12
SREK1-216ENST00000612404 GIGYF2Q6Y7W6 1299 aaKnown RBP22.03■■□□□ 1.12
SREK1-216ENST00000612404 AFDNP55196 1824 aaKnown RBP22.02■■□□□ 1.12
SREK1-216ENST00000612404 ERVV-1B6SEH8 477 aa22.02■■□□□ 1.12
SREK1-216ENST00000612404 GNAI2P04899 355 aa22.02■■□□□ 1.12
SREK1-216ENST00000612404 NBPF7P0C2Y1 421 aaPredicted RBP22.02■■□□□ 1.12
SREK1-216ENST00000612404 TCIRG1Q13488 830 aa22.02■■□□□ 1.12
SREK1-216ENST00000612404 GCKRQ14397 625 aa22.02■■□□□ 1.12
SREK1-216ENST00000612404 GRM8O00222 908 aa22.01■■□□□ 1.11
SREK1-216ENST00000612404 SF3B2Q13435 895 aaKnown RBP22■■□□□ 1.11
SREK1-216ENST00000612404 HSP90AB3PQ58FF7 597 aa22■■□□□ 1.11
SREK1-216ENST00000612404 PHF14O94880 888 aa22■■□□□ 1.11
SREK1-216ENST00000612404 CAMTA2O94983 1202 aa22■■□□□ 1.11
SREK1-216ENST00000612404 IGHDP01880 384 aa22■■□□□ 1.11
SREK1-216ENST00000612404 HMGB2P26583 209 aaKnown RBP22■■□□□ 1.11
SREK1-216ENST00000612404 RWDD1Q9H446 243 aaPredicted RBP22■■□□□ 1.11
SREK1-216ENST00000612404 CWC25Q9NXE8 425 aaPredicted RBP22■■□□□ 1.11
SREK1-216ENST00000612404 LRRFIP2Q9Y608 721 aaKnown RBP22■■□□□ 1.11
SREK1-216ENST00000612404 GPTP24298 496 aa21.98■■□□□ 1.11
SREK1-216ENST00000612404 AMIGO3Q86WK7 504 aa21.98■■□□□ 1.11
SREK1-216ENST00000612404 CCDC191Q8NCU4 936 aa21.98■■□□□ 1.11
SREK1-216ENST00000612404 NUP98P52948 1817 aa21.98■■□□□ 1.11
SREK1-216ENST00000612404 ISCA1Q9BUE6 129 aa21.98■■□□□ 1.11
SREK1-216ENST00000612404 EN1Q05925 392 aaPredicted RBP21.97■■□□□ 1.11
SREK1-216ENST00000612404 CENPQQ7L2Z9 268 aaPredicted RBP21.97■■□□□ 1.11
SREK1-216ENST00000612404 TRAPPC3LQ5T215 181 aa21.97■■□□□ 1.11
SREK1-216ENST00000612404 CEP85Q6P2H3 762 aa21.97■■□□□ 1.11
SREK1-216ENST00000612404 JARID2Q92833 1246 aaPredicted RBP21.97■■□□□ 1.11
SREK1-216ENST00000612404 ARHGEF1Q92888 912 aaKnown RBP21.97■■□□□ 1.11
SREK1-216ENST00000612404 RGPD3A6NKT7 1758 aaPredicted RBP21.96■■□□□ 1.11
SREK1-216ENST00000612404 RGPD4Q7Z3J3 1758 aa21.96■■□□□ 1.11
SREK1-216ENST00000612404 UBE3BQ7Z3V4 1068 aa21.96■■□□□ 1.11
SREK1-216ENST00000612404 HDAC5Q9UQL6 1122 aa21.96■■□□□ 1.11
SREK1-216ENST00000612404 ZNF652Q9Y2D9 606 aa21.96■■□□□ 1.11
SREK1-216ENST00000612404 IBTKQ9P2D0 1353 aaPredicted RBP21.96■■□□□ 1.11
SREK1-216ENST00000612404 UTYO14607 1347 aa21.96■■□□□ 1.11
SREK1-216ENST00000612404 KDM2BQ8NHM5 1336 aa21.96■■□□□ 1.11
SREK1-216ENST00000612404 ZPR1O75312 459 aa21.95■■□□□ 1.11
SREK1-216ENST00000612404 HDAC1Q13547 482 aaPredicted RBP21.95■■□□□ 1.11
SREK1-216ENST00000612404 SIRT2Q8IXJ6 389 aa21.95■■□□□ 1.11
SREK1-216ENST00000612404 RPAP2Q8IXW5 612 aaPredicted RBP21.95■■□□□ 1.11
SREK1-216ENST00000612404 RFC4P35249 363 aa21.95■■□□□ 1.1
SREK1-216ENST00000612404 TRIM28Q13263 835 aaKnown RBP21.95■■□□□ 1.1
SREK1-216ENST00000612404 EZH2Q15910 746 aaKnown RBP21.95■■□□□ 1.1
SREK1-216ENST00000612404 RTL5Q5HYW3 569 aaPredicted RBP21.95■■□□□ 1.1
SREK1-216ENST00000612404 ANKRD44Q8N8A2 993 aa21.95■■□□□ 1.1
SREK1-216ENST00000612404 NARFQ9UHQ1 456 aa21.95■■□□□ 1.1
SREK1-216ENST00000612404 ANKRD36CQ5JPF3 1778 aa21.95■■□□□ 1.1
SREK1-216ENST00000612404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.94■■□□□ 1.1
SREK1-216ENST00000612404 BAG6P46379 1132 aa21.94■■□□□ 1.1
SREK1-216ENST00000612404 SRP68Q9UHB9 627 aaKnown RBP21.94■■□□□ 1.1
SREK1-216ENST00000612404 UBR3Q6ZT12 1888 aa21.94■■□□□ 1.1
SREK1-216ENST00000612404 BCORQ6W2J9 1755 aa21.94■■□□□ 1.1
SREK1-216ENST00000612404 USPL1Q5W0Q7 1092 aa21.94■■□□□ 1.1
SREK1-216ENST00000612404 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
SREK1-216ENST00000612404 CAMKK2Q96RR4 588 aa21.94■■□□□ 1.1
SREK1-216ENST00000612404 ADRA2BP18089 450 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms