RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 USP42Q9H9J4 1324 aaKnown RBP34.29■■■■□ 3.08
CSPG5-205ENST00000610462 IL2RBP14784 551 aa34.29■■■■□ 3.08
CSPG5-205ENST00000610462 ANKRD13DQ6ZTN6 518 aa34.29■■■■□ 3.08
CSPG5-205ENST00000610462 ERC1Q8IUD2 1116 aa34.29■■■■□ 3.08
CSPG5-205ENST00000610462 ERVV-2B6SEH9 535 aa34.28■■■■□ 3.08
CSPG5-205ENST00000610462 HSP90AA1P07900 732 aaKnown RBP34.28■■■■□ 3.08
CSPG5-205ENST00000610462 ARFGEF2Q9Y6D5 1785 aa34.28■■■■□ 3.08
CSPG5-205ENST00000610462 NKX1-1Q15270 411 aaPredicted RBP34.27■■■■□ 3.08
CSPG5-205ENST00000610462 AFDNP55196 1824 aaKnown RBP34.27■■■■□ 3.08
CSPG5-205ENST00000610462 MYD88Q99836 296 aa34.27■■■■□ 3.08
CSPG5-205ENST00000610462 BICC1Q9H694 974 aaKnown RBP34.27■■■■□ 3.08
CSPG5-205ENST00000610462 MCM4P33991 863 aa34.26■■■■□ 3.08
CSPG5-205ENST00000610462 GCKRQ14397 625 aa34.26■■■■□ 3.08
CSPG5-205ENST00000610462 PAPPAQ13219 1627 aa34.26■■■■□ 3.07
CSPG5-205ENST00000610462 TTC41PQ6P2S7 1318 aa34.26■■■■□ 3.07
CSPG5-205ENST00000610462 CLASRPQ8N2M8 674 aaKnown RBP34.25■■■■□ 3.07
CSPG5-205ENST00000610462 PA2G4Q9UQ80 394 aaKnown RBP34.25■■■■□ 3.07
CSPG5-205ENST00000610462 EVA1CP58658 441 aa34.23■■■■□ 3.07
CSPG5-205ENST00000610462 STRN4Q9NRL3 753 aa34.23■■■■□ 3.07
CSPG5-205ENST00000610462 ERBB4Q15303 1308 aa34.23■■■■□ 3.07
CSPG5-205ENST00000610462 ST18O60284 1047 aa34.23■■■■□ 3.07
CSPG5-205ENST00000610462 PIP4K2AP48426 406 aaPredicted RBP34.23■■■■□ 3.07
CSPG5-205ENST00000610462 MCCP23508 829 aa34.21■■■■□ 3.07
CSPG5-205ENST00000610462 CNTROBQ8N137 903 aa34.21■■■■□ 3.07
CSPG5-205ENST00000610462 EPB41L2O43491 1005 aaKnown RBP34.2■■■■□ 3.07
CSPG5-205ENST00000610462 FOXD4L1Q9NU39 408 aa34.2■■■■□ 3.07
CSPG5-205ENST00000610462 KCPQ6ZWJ8 1503 aa34.2■■■■□ 3.07
CSPG5-205ENST00000610462 GLRX3O76003 335 aaKnown RBP34.19■■■■□ 3.06
CSPG5-205ENST00000610462 ANO2Q9NQ90 1003 aa34.19■■■■□ 3.06
CSPG5-205ENST00000610462 MAP4K4O95819 1239 aaPredicted RBP34.19■■■■□ 3.06
CSPG5-205ENST00000610462 RAB3GAP1Q15042 981 aa34.18■■■■□ 3.06
CSPG5-205ENST00000610462 G3BP1Q13283 466 aaKnown RBP eCLIP34.18■■■■□ 3.06
CSPG5-205ENST00000610462 PLBD2Q8NHP8 589 aa34.18■■■■□ 3.06
CSPG5-205ENST00000610462 ANAPC15P60006 121 aa34.17■■■■□ 3.06
CSPG5-205ENST00000610462 DDX54Q8TDD1 881 aaKnown RBP34.17■■■■□ 3.06
CSPG5-205ENST00000610462 GPATCH3Q96I76 525 aa34.16■■■■□ 3.06
CSPG5-205ENST00000610462 ECHDC1Q9NTX5 307 aa34.16■■■■□ 3.06
CSPG5-205ENST00000610462 IFIT2P09913 472 aaKnown RBP34.16■■■■□ 3.06
CSPG5-205ENST00000610462 COL15A1P39059 1388 aa34.15■■■■□ 3.06
CSPG5-205ENST00000610462 SASH1O94885 1247 aa34.15■■■■□ 3.06
CSPG5-205ENST00000610462 TNPO1Q92973 898 aaKnown RBP34.15■■■■□ 3.06
CSPG5-205ENST00000610462 NBPF26B4DH59 902 aa34.14■■■■□ 3.06
CSPG5-205ENST00000610462 NBPF14Q5TI25 921 aa34.14■■■■□ 3.06
CSPG5-205ENST00000610462 NBPF10Q6P3W6 841 aaKnown RBP34.14■■■■□ 3.06
CSPG5-205ENST00000610462 NBPF15Q8N660 670 aa34.14■■■■□ 3.06
CSPG5-205ENST00000610462 IL17RAQ96F46 866 aa34.14■■■■□ 3.06
CSPG5-205ENST00000610462 TOGARAM1Q9Y4F4 1720 aa34.14■■■■□ 3.05
CSPG5-205ENST00000610462 EPHA10Q5JZY3 1008 aa34.13■■■■□ 3.05
CSPG5-205ENST00000610462 TNS2Q63HR2 1409 aa34.13■■■■□ 3.05
CSPG5-205ENST00000610462 AACSQ86V21 672 aa34.13■■■■□ 3.05
CSPG5-205ENST00000610462 NUP188Q5SRE5 1749 aa34.13■■■■□ 3.05
CSPG5-205ENST00000610462 IL25Q9H293 177 aa34.12■■■■□ 3.05
CSPG5-205ENST00000610462 DDX11L8A8MPP1 907 aa34.11■■■■□ 3.05
CSPG5-205ENST00000610462 SGSM2O43147 1006 aa34.11■■■■□ 3.05
CSPG5-205ENST00000610462 PALD1Q9ULE6 856 aa34.1■■■■□ 3.05
CSPG5-205ENST00000610462 ATP5J2-PTCD1G3V325 749 aa34.08■■■■□ 3.05
CSPG5-205ENST00000610462 PTCD1O75127 700 aaKnown RBP34.08■■■■□ 3.05
CSPG5-205ENST00000610462 NEK4P51957 841 aa34.08■■■■□ 3.05
CSPG5-205ENST00000610462 UBE3BQ7Z3V4 1068 aa34.08■■■■□ 3.05
CSPG5-205ENST00000610462 EAF2Q96CJ1 260 aaPredicted RBP34.08■■■■□ 3.05
CSPG5-205ENST00000610462 GBP4Q96PP9 640 aa34.08■■■■□ 3.05
CSPG5-205ENST00000610462 COL14A1Q05707 1796 aaKnown RBP34.07■■■■□ 3.05
CSPG5-205ENST00000610462 RABL6Q3YEC7 729 aaPredicted RBP34.07■■■■□ 3.04
CSPG5-205ENST00000610462 SIL1Q9H173 461 aa34.07■■■■□ 3.04
CSPG5-205ENST00000610462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.07■■■■□ 3.04
CSPG5-205ENST00000610462 A0A087WZG4 1122 aa34.07■■■■□ 3.04
CSPG5-205ENST00000610462 COPRSQ9NQ92 184 aa34.07■■■■□ 3.04
CSPG5-205ENST00000610462 MCM2P49736 904 aa34.06■■■■□ 3.04
CSPG5-205ENST00000610462 HSPA4P34932 840 aa34.05■■■■□ 3.04
CSPG5-205ENST00000610462 CASP7P55210 303 aa34.05■■■■□ 3.04
CSPG5-205ENST00000610462 JARID2Q92833 1246 aaPredicted RBP34.05■■■■□ 3.04
CSPG5-205ENST00000610462 BTG4Q9NY30 223 aa34.05■■■■□ 3.04
CSPG5-205ENST00000610462 A1BGP04217 495 aa34.05■■■■□ 3.04
CSPG5-205ENST00000610462 RFX5P48382 616 aaPredicted RBP34.05■■■■□ 3.04
CSPG5-205ENST00000610462 KLHDC4Q8TBB5 520 aa34.05■■■■□ 3.04
CSPG5-205ENST00000610462 CWC22Q9HCG8 908 aaKnown RBP34.05■■■■□ 3.04
CSPG5-205ENST00000610462 RAD50Q92878 1312 aa34.04■■■■□ 3.04
CSPG5-205ENST00000610462 TTLL7Q6ZT98 887 aa34.03■■■■□ 3.04
CSPG5-205ENST00000610462 EVI5LQ96CN4 794 aa34.03■■■■□ 3.04
CSPG5-205ENST00000610462 TMOD3Q9NYL9 352 aa34.03■■■■□ 3.04
CSPG5-205ENST00000610462 ROBO1Q9Y6N7 1651 aa34.03■■■■□ 3.04
CSPG5-205ENST00000610462 LSG1Q9H089 658 aaKnown RBP34.02■■■■□ 3.04
CSPG5-205ENST00000610462 CCDC8Q9H0W5 538 aaPredicted RBP34.02■■■■□ 3.04
CSPG5-205ENST00000610462 DIAPH3Q9NSV4 1193 aa34.02■■■■□ 3.04
CSPG5-205ENST00000610462 TRAK2O60296 914 aa34.02■■■■□ 3.04
CSPG5-205ENST00000610462 IL27Q8NEV9 243 aa34.02■■■■□ 3.04
CSPG5-205ENST00000610462 RUFY2Q8WXA3 655 aa34.02■■■■□ 3.04
CSPG5-205ENST00000610462 TJP1Q07157 1748 aa34.01■■■■□ 3.04
CSPG5-205ENST00000610462 CWC27Q6UX04 472 aaKnown RBP34.01■■■■□ 3.04
CSPG5-205ENST00000610462 H7C1W4 665 aa34■■■■□ 3.03
CSPG5-205ENST00000610462 SSFA2P28290 1259 aa34■■■■□ 3.03
CSPG5-205ENST00000610462 PTPN12Q05209 780 aaKnown RBP34■■■■□ 3.03
CSPG5-205ENST00000610462 COL22A1Q8NFW1 1626 aaPredicted RBP34■■■■□ 3.03
CSPG5-205ENST00000610462 NUCB2P80303 420 aa34■■■■□ 3.03
CSPG5-205ENST00000610462 ITGB4P16144 1822 aa33.99■■■■□ 3.03
CSPG5-205ENST00000610462 CLEC17AQ6ZS10 378 aa33.99■■■■□ 3.03
CSPG5-205ENST00000610462 KIAA1211Q6ZU35 1233 aa33.99■■■■□ 3.03
CSPG5-205ENST00000610462 AHDC1Q5TGY3 1603 aaPredicted RBP33.99■■■■□ 3.03
CSPG5-205ENST00000610462 TLR7Q9NYK1 1049 aaKnown RBP33.99■■■■□ 3.03
CSPG5-205ENST00000610462 CWC25Q9NXE8 425 aaPredicted RBP33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms