RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 CEP85Q6P2H3 762 aa27.52■■■□□ 2
USF2-216ENST00000607959 KRT27Q7Z3Y8 459 aa27.52■■■□□ 2
USF2-216ENST00000607959 LINS1Q8NG48 757 aa27.52■■■□□ 2
USF2-216ENST00000607959 GNAI3P08754 354 aa27.51■■□□□ 1.99
USF2-216ENST00000607959 NBPF7P0C2Y1 421 aaPredicted RBP27.51■■□□□ 1.99
USF2-216ENST00000607959 INTS5Q6P9B9 1019 aaKnown RBP27.51■■□□□ 1.99
USF2-216ENST00000607959 ANKRD44Q8N8A2 993 aa27.51■■□□□ 1.99
USF2-216ENST00000607959 MYD88Q99836 296 aa27.49■■□□□ 1.99
USF2-216ENST00000607959 GNAI2P04899 355 aa27.49■■□□□ 1.99
USF2-216ENST00000607959 SMC5Q8IY18 1101 aa27.49■■□□□ 1.99
USF2-216ENST00000607959 NEURL1BA8MQ27 555 aa27.48■■□□□ 1.99
USF2-216ENST00000607959 LY75O60449 1722 aa27.48■■□□□ 1.99
USF2-216ENST00000607959 IBTKQ9P2D0 1353 aaPredicted RBP27.48■■□□□ 1.99
USF2-216ENST00000607959 CRKLP46109 303 aaKnown RBP27.47■■□□□ 1.99
USF2-216ENST00000607959 KCNQ4P56696 695 aa27.47■■□□□ 1.99
USF2-216ENST00000607959 LRRFIP2Q9Y608 721 aaKnown RBP27.47■■□□□ 1.99
USF2-216ENST00000607959 POTEAQ6S8J7 498 aa27.47■■□□□ 1.99
USF2-216ENST00000607959 RPAP2Q8IXW5 612 aaPredicted RBP27.47■■□□□ 1.99
USF2-216ENST00000607959 ZBTB3Q9H5J0 574 aa27.47■■□□□ 1.99
USF2-216ENST00000607959 UBTFL1P0CB47 393 aaPredicted RBP27.46■■□□□ 1.99
USF2-216ENST00000607959 LINC00116Q8NCU8 138 aa27.45■■□□□ 1.99
USF2-216ENST00000607959 BCL11BQ9C0K0 894 aaPredicted RBP27.45■■□□□ 1.99
USF2-216ENST00000607959 CCDC87Q9NVE4 849 aa27.45■■□□□ 1.99
USF2-216ENST00000607959 ZNF330Q9Y3S2 320 aaPredicted RBP27.45■■□□□ 1.99
USF2-216ENST00000607959 AFDNP55196 1824 aaKnown RBP27.45■■□□□ 1.99
USF2-216ENST00000607959 UTYO14607 1347 aa27.45■■□□□ 1.98
USF2-216ENST00000607959 RXRBP28702 533 aa27.45■■□□□ 1.98
USF2-216ENST00000607959 FAM196AQ6ZSG2 479 aa27.45■■□□□ 1.98
USF2-216ENST00000607959 IL6STP40189 918 aaPredicted RBP27.44■■□□□ 1.98
USF2-216ENST00000607959 PDZRN3Q9UPQ7 1066 aa27.44■■□□□ 1.98
USF2-216ENST00000607959 ATP5J2-PTCD1G3V325 749 aa27.43■■□□□ 1.98
USF2-216ENST00000607959 EIF5P55010 431 aaKnown RBP27.43■■□□□ 1.98
USF2-216ENST00000607959 NEXNQ0ZGT2 675 aa27.43■■□□□ 1.98
USF2-216ENST00000607959 GCKRQ14397 625 aa27.43■■□□□ 1.98
USF2-216ENST00000607959 GRM8O00222 908 aa27.41■■□□□ 1.98
USF2-216ENST00000607959 PNMA6EA0A0J9YXQ4 647 aa27.41■■□□□ 1.98
USF2-216ENST00000607959 KAZALD1Q96I82 304 aa27.41■■□□□ 1.98
USF2-216ENST00000607959 PELP1Q8IZL8 1130 aaKnown RBP27.4■■□□□ 1.98
USF2-216ENST00000607959 C9orf78Q9NZ63 289 aaPredicted RBP27.4■■□□□ 1.98
USF2-216ENST00000607959 MAP3K15Q6ZN16 1313 aa27.4■■□□□ 1.98
USF2-216ENST00000607959 ATP8B2P98198 1209 aa27.39■■□□□ 1.98
USF2-216ENST00000607959 DCTPP1Q9H773 170 aa27.39■■□□□ 1.98
USF2-216ENST00000607959 TAF1LQ8IZX4 1826 aa27.39■■□□□ 1.98
USF2-216ENST00000607959 HLFQ16534 295 aa27.39■■□□□ 1.97
USF2-216ENST00000607959 ISCA1Q9BUE6 129 aa27.38■■□□□ 1.97
USF2-216ENST00000607959 TRIM37O94972 964 aa27.37■■□□□ 1.97
USF2-216ENST00000607959 KIF6Q6ZMV9 814 aa27.37■■□□□ 1.97
USF2-216ENST00000607959 SUCLG2Q96I99 432 aa27.37■■□□□ 1.97
USF2-216ENST00000607959 CASP7P55210 303 aa27.37■■□□□ 1.97
USF2-216ENST00000607959 TCIRG1Q13488 830 aa27.37■■□□□ 1.97
USF2-216ENST00000607959 GCC1Q96CN9 775 aa27.37■■□□□ 1.97
USF2-216ENST00000607959 TBC1D2BQ9UPU7 963 aa27.37■■□□□ 1.97
USF2-216ENST00000607959 NUP98P52948 1817 aa27.37■■□□□ 1.97
USF2-216ENST00000607959 NUCB1Q02818 461 aa27.36■■□□□ 1.97
USF2-216ENST00000607959 JARID2Q92833 1246 aaPredicted RBP27.36■■□□□ 1.97
USF2-216ENST00000607959 CCNL1Q9UK58 526 aaPredicted RBP27.36■■□□□ 1.97
USF2-216ENST00000607959 CNTNAP4Q9C0A0 1308 aa27.35■■□□□ 1.97
USF2-216ENST00000607959 GIGYF2Q6Y7W6 1299 aaKnown RBP27.35■■□□□ 1.97
USF2-216ENST00000607959 DZIP3Q86Y13 1208 aaKnown RBP27.35■■□□□ 1.97
USF2-216ENST00000607959 PDE4AP27815 886 aa27.34■■□□□ 1.97
USF2-216ENST00000607959 RGS3P49796 1198 aa27.34■■□□□ 1.97
USF2-216ENST00000607959 PPP1R42Q7Z4L9 355 aa27.34■■□□□ 1.97
USF2-216ENST00000607959 LRRC4BQ9NT99 713 aa27.34■■□□□ 1.97
USF2-216ENST00000607959 ANKRD36CQ5JPF3 1778 aa27.34■■□□□ 1.97
USF2-216ENST00000607959 POLA2Q14181 598 aa27.33■■□□□ 1.97
USF2-216ENST00000607959 SSH3Q8TE77 659 aa27.33■■□□□ 1.97
USF2-216ENST00000607959 ARXQ96QS3 562 aa27.33■■□□□ 1.97
USF2-216ENST00000607959 MTX1Q13505 466 aa27.33■■□□□ 1.97
USF2-216ENST00000607959 EPHA10Q5JZY3 1008 aa27.33■■□□□ 1.97
USF2-216ENST00000607959 A0A087WZG4 1122 aa27.32■■□□□ 1.96
USF2-216ENST00000607959 ERVV-1B6SEH8 477 aa27.32■■□□□ 1.96
USF2-216ENST00000607959 H7C1W4 665 aa27.32■■□□□ 1.96
USF2-216ENST00000607959 TRIM28Q13263 835 aaKnown RBP27.32■■□□□ 1.96
USF2-216ENST00000607959 CCDC191Q8NCU4 936 aa27.32■■□□□ 1.96
USF2-216ENST00000607959 CWC25Q9NXE8 425 aaPredicted RBP27.32■■□□□ 1.96
USF2-216ENST00000607959 COL15A1P39059 1388 aa27.32■■□□□ 1.96
USF2-216ENST00000607959 HMMRO75330 724 aa27.31■■□□□ 1.96
USF2-216ENST00000607959 RC3H1Q5TC82 1133 aaKnown RBP27.31■■□□□ 1.96
USF2-216ENST00000607959 SMIM5Q71RC9 77 aa27.31■■□□□ 1.96
USF2-216ENST00000607959 UBE3BQ7Z3V4 1068 aa27.31■■□□□ 1.96
USF2-216ENST00000607959 CAMTA2O94983 1202 aa27.31■■□□□ 1.96
USF2-216ENST00000607959 BICC1Q9H694 974 aaKnown RBP27.31■■□□□ 1.96
USF2-216ENST00000607959 AMIGO3Q86WK7 504 aa27.3■■□□□ 1.96
USF2-216ENST00000607959 CHD1LQ86WJ1 897 aa27.29■■□□□ 1.96
USF2-216ENST00000607959 C4BP0C0L5 1744 aa27.29■■□□□ 1.96
USF2-216ENST00000607959 ANKRD45Q5TZF3 282 aa27.29■■□□□ 1.96
USF2-216ENST00000607959 BCORQ6W2J9 1755 aa27.29■■□□□ 1.96
USF2-216ENST00000607959 LNPKQ9C0E8 428 aa27.28■■□□□ 1.96
USF2-216ENST00000607959 SRGAP3O43295 1099 aa27.28■■□□□ 1.96
USF2-216ENST00000607959 PROM2Q8N271 834 aa27.27■■□□□ 1.96
USF2-216ENST00000607959 RPS6KA4O75676 772 aa27.26■■□□□ 1.95
USF2-216ENST00000607959 NLRP10Q86W26 655 aa27.26■■□□□ 1.95
USF2-216ENST00000607959 ZNF34Q8IZ26 560 aa27.26■■□□□ 1.95
USF2-216ENST00000607959 EXOC6BQ9Y2D4 811 aa27.26■■□□□ 1.95
USF2-216ENST00000607959 GPTP24298 496 aa27.26■■□□□ 1.95
USF2-216ENST00000607959 HDAC5Q9UQL6 1122 aa27.26■■□□□ 1.95
USF2-216ENST00000607959 UBN2Q6ZU65 1347 aa27.25■■□□□ 1.95
USF2-216ENST00000607959 RTL5Q5HYW3 569 aaPredicted RBP27.25■■□□□ 1.95
USF2-216ENST00000607959 NPM2Q86SE8 214 aaKnown RBP27.25■■□□□ 1.95
USF2-216ENST00000607959 HSP90AB3PQ58FF7 597 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms