RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 ZNF594Q96JF6 807 aaPredicted RBP10.98□□□□□ -0.65
LINC00458-206ENST00000607494 MARK1Q9P0L2 795 aa10.98□□□□□ -0.65
LINC00458-206ENST00000607494 ZNF468Q5VIY5 522 aaPredicted RBP10.97□□□□□ -0.65
LINC00458-206ENST00000607494 ERICH6Q7L0X2 663 aa10.97□□□□□ -0.65
LINC00458-206ENST00000607494 C7orf43Q8WVR3 580 aa10.97□□□□□ -0.65
LINC00458-206ENST00000607494 MKRN1Q9UHC7 482 aaKnown RBP10.97□□□□□ -0.65
LINC00458-206ENST00000607494 PRR12Q9ULL5 1215 aa10.97□□□□□ -0.65
LINC00458-206ENST00000607494 SERTM1A2A2V5 107 aa10.96□□□□□ -0.65
LINC00458-206ENST00000607494 SFI1A8K8P3 1242 aa10.96□□□□□ -0.65
LINC00458-206ENST00000607494 TMEM132AQ24JP5 1023 aa10.96□□□□□ -0.65
LINC00458-206ENST00000607494 TSEN2Q8NCE0 465 aaKnown RBP10.96□□□□□ -0.65
LINC00458-206ENST00000607494 HSH2DQ96JZ2 352 aa10.96□□□□□ -0.65
LINC00458-206ENST00000607494 GNB5O14775 395 aa10.95□□□□□ -0.66
LINC00458-206ENST00000607494 ATP1A2P50993 1020 aa10.95□□□□□ -0.66
LINC00458-206ENST00000607494 RHPN1Q8TCX5 695 aa10.95□□□□□ -0.66
LINC00458-206ENST00000607494 HCN4Q9Y3Q4 1203 aa10.95□□□□□ -0.66
LINC00458-206ENST00000607494 SFSWAPQ12872 951 aaKnown RBP10.94□□□□□ -0.66
LINC00458-206ENST00000607494 GLMNQ92990 594 aa10.94□□□□□ -0.66
LINC00458-206ENST00000607494 AVENQ9NQS1 362 aaPredicted RBP10.94□□□□□ -0.66
LINC00458-206ENST00000607494 RAB44Q7Z6P3 723 aaPredicted RBP10.93□□□□□ -0.66
LINC00458-206ENST00000607494 SYT9Q86SS6 491 aa10.93□□□□□ -0.66
LINC00458-206ENST00000607494 SLC30A3Q99726 388 aa10.93□□□□□ -0.66
LINC00458-206ENST00000607494 ADAM23O75077 832 aa10.92□□□□□ -0.66
LINC00458-206ENST00000607494 DKK1O94907 266 aa10.92□□□□□ -0.66
LINC00458-206ENST00000607494 PSMA6P60900 246 aaKnown RBP10.92□□□□□ -0.66
LINC00458-206ENST00000607494 FNBP4Q8N3X1 1017 aaPredicted RBP10.92□□□□□ -0.66
LINC00458-206ENST00000607494 LGR5O75473 907 aa10.91□□□□□ -0.66
LINC00458-206ENST00000607494 PROSER2Q86WR7 435 aaPredicted RBP10.91□□□□□ -0.66
LINC00458-206ENST00000607494 SIX5Q8N196 739 aa10.91□□□□□ -0.66
LINC00458-206ENST00000607494 LARGE2Q8N3Y3 721 aa10.91□□□□□ -0.66
LINC00458-206ENST00000607494 TRIM11Q96F44 468 aa10.91□□□□□ -0.66
LINC00458-206ENST00000607494 PHACTR1Q9C0D0 580 aa10.91□□□□□ -0.66
LINC00458-206ENST00000607494 PALM3A6NDB9 673 aaPredicted RBP10.9□□□□□ -0.66
LINC00458-206ENST00000607494 C21orf2O43822 256 aa10.9□□□□□ -0.66
LINC00458-206ENST00000607494 CHRNA4P43681 627 aa10.9□□□□□ -0.66
LINC00458-206ENST00000607494 BAG6P46379 1132 aa10.9□□□□□ -0.66
LINC00458-206ENST00000607494 LAMC2Q13753 1193 aa10.9□□□□□ -0.66
LINC00458-206ENST00000607494 ZNF280CQ8ND82 737 aa10.9□□□□□ -0.66
LINC00458-206ENST00000607494 NEUROD4Q9HD90 331 aa10.9□□□□□ -0.66
LINC00458-206ENST00000607494 TFIP11Q9UBB9 837 aaKnown RBP10.9□□□□□ -0.66
LINC00458-206ENST00000607494 C1QTNF9BB2RNN3 333 aa10.89□□□□□ -0.67
LINC00458-206ENST00000607494 MAFBQ9Y5Q3 323 aaPredicted RBP10.89□□□□□ -0.67
LINC00458-206ENST00000607494 PPP1R12BO60237 982 aaPredicted RBP10.88□□□□□ -0.67
LINC00458-206ENST00000607494 POTEAQ6S8J7 498 aa10.88□□□□□ -0.67
LINC00458-206ENST00000607494 CD163Q86VB7 1156 aa10.88□□□□□ -0.67
LINC00458-206ENST00000607494 GAS2L2Q8NHY3 880 aa10.88□□□□□ -0.67
LINC00458-206ENST00000607494 MDFIQ99750 246 aa10.88□□□□□ -0.67
LINC00458-206ENST00000607494 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
LINC00458-206ENST00000607494 ELOA3DA6NLF2 546 aaPredicted RBP10.87□□□□□ -0.67
LINC00458-206ENST00000607494 FURINP09958 794 aa10.87□□□□□ -0.67
LINC00458-206ENST00000607494 RASA1P20936 1047 aa10.87□□□□□ -0.67
LINC00458-206ENST00000607494 ELOA3BQ3SY89 546 aa10.87□□□□□ -0.67
LINC00458-206ENST00000607494 ALYREFQ86V81 257 aaKnown RBP10.87□□□□□ -0.67
LINC00458-206ENST00000607494 ELOA3Q8NG57 546 aa10.87□□□□□ -0.67
LINC00458-206ENST00000607494 M0R2N6 131 aa10.86□□□□□ -0.67
LINC00458-206ENST00000607494 HIRAP54198 1017 aaPredicted RBP10.86□□□□□ -0.67
LINC00458-206ENST00000607494 CEP63Q96MT8 703 aa10.86□□□□□ -0.67
LINC00458-206ENST00000607494 BRD7Q9NPI1 651 aa10.86□□□□□ -0.67
LINC00458-206ENST00000607494 NOP53Q9NZM5 478 aaKnown RBP10.86□□□□□ -0.67
LINC00458-206ENST00000607494 TYRO3Q06418 890 aa10.85□□□□□ -0.67
LINC00458-206ENST00000607494 SPEM2Q0P670 501 aa10.85□□□□□ -0.67
LINC00458-206ENST00000607494 C8orf86Q6ZUL3 223 aa10.85□□□□□ -0.67
LINC00458-206ENST00000607494 CHMP7Q8WUX9 453 aaPredicted RBP10.85□□□□□ -0.67
LINC00458-206ENST00000607494 NGLY1Q96IV0 654 aa10.85□□□□□ -0.67
LINC00458-206ENST00000607494 SUSD3Q96L08 255 aa10.85□□□□□ -0.67
LINC00458-206ENST00000607494 PLVAPQ9BX97 442 aa10.85□□□□□ -0.67
LINC00458-206ENST00000607494 CHMP3Q9Y3E7 222 aa10.85□□□□□ -0.67
LINC00458-206ENST00000607494 GPC6Q9Y625 555 aaPredicted RBP10.85□□□□□ -0.67
LINC00458-206ENST00000607494 PIK3R2O00459 728 aa10.84□□□□□ -0.67
LINC00458-206ENST00000607494 CRTC2Q53ET0 693 aaPredicted RBP10.84□□□□□ -0.67
LINC00458-206ENST00000607494 C1orf53Q5VUE5 145 aa10.84□□□□□ -0.67
LINC00458-206ENST00000607494 ALDH16A1Q8IZ83 802 aa10.84□□□□□ -0.67
LINC00458-206ENST00000607494 SCG3Q8WXD2 468 aaKnown RBP10.84□□□□□ -0.67
LINC00458-206ENST00000607494 K7ELQ4 463 aaPredicted RBP10.83□□□□□ -0.68
LINC00458-206ENST00000607494 SIN3BO75182 1162 aa10.83□□□□□ -0.68
LINC00458-206ENST00000607494 STARD13Q9Y3M8 1113 aa10.83□□□□□ -0.68
LINC00458-206ENST00000607494 ATAD2Q6PL18 1390 aa10.82□□□□□ -0.68
LINC00458-206ENST00000607494 C2orf49Q9BVC5 232 aaPredicted RBP10.82□□□□□ -0.68
LINC00458-206ENST00000607494 RBM19Q9Y4C8 960 aaKnown RBP10.82□□□□□ -0.68
LINC00458-206ENST00000607494 FAM229AH3BQW9 127 aa10.81□□□□□ -0.68
LINC00458-206ENST00000607494 ALBP02768 609 aa10.81□□□□□ -0.68
LINC00458-206ENST00000607494 SEC13P55735 322 aa10.81□□□□□ -0.68
LINC00458-206ENST00000607494 ADARB2-AS1A8MUL3 147 aa10.8□□□□□ -0.68
LINC00458-206ENST00000607494 M0R082 166 aa10.8□□□□□ -0.68
LINC00458-206ENST00000607494 ALAS2P22557 587 aa10.8□□□□□ -0.68
LINC00458-206ENST00000607494 ADH7P40394 386 aa10.8□□□□□ -0.68
LINC00458-206ENST00000607494 ZNF417Q8TAU3 575 aa10.8□□□□□ -0.68
LINC00458-206ENST00000607494 TNFRSF25Q93038 417 aa10.8□□□□□ -0.68
LINC00458-206ENST00000607494 CALR3Q96L12 384 aaKnown RBP10.8□□□□□ -0.68
LINC00458-206ENST00000607494 ZNF587Q96SQ5 575 aaPredicted RBP10.8□□□□□ -0.68
LINC00458-206ENST00000607494 PPP1R12CQ9BZL4 782 aa10.8□□□□□ -0.68
LINC00458-206ENST00000607494 KCNH4Q9UQ05 1017 aa10.8□□□□□ -0.68
LINC00458-206ENST00000607494 DPYDQ12882 1025 aa10.79□□□□□ -0.68
LINC00458-206ENST00000607494 ANKIB1Q9P2G1 1089 aa10.79□□□□□ -0.68
LINC00458-206ENST00000607494 PTK7Q13308 1070 aa10.78□□□□□ -0.68
LINC00458-206ENST00000607494 COL9A3Q14050 684 aaPredicted RBP10.78□□□□□ -0.68
LINC00458-206ENST00000607494 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
LINC00458-206ENST00000607494 BHMTQ93088 406 aa10.78□□□□□ -0.68
LINC00458-206ENST00000607494 HINFPQ9BQA5 517 aa10.78□□□□□ -0.68
LINC00458-206ENST00000607494 USP17L15C9J2P7 530 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms