RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 PRC1O43663 620 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 RAB3IPQ96QF0 476 aaPredicted RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 CENPJQ9HC77 1338 aaPredicted RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 LRSAM1Q6UWE0 723 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 TAOK1Q7L7X3 1001 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 IFT122Q9HBG6 1241 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 CWC25Q9NXE8 425 aaPredicted RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 CAPZA3Q96KX2 299 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 SPAG5Q96R06 1193 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 DDX23Q9BUQ8 820 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 DTNBO60941 627 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 DDX58O95786 925 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 ZNF165P49910 485 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 LMOD2Q6P5Q4 547 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 CACNA2D3Q8IZS8 1091 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 HSPA8P11142 646 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 PPP6R1Q9UPN7 881 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 ARHGAP10A1A4S6 786 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 PLVAPQ9BX97 442 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 FAM184BQ9ULE4 1060 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 HOMER2Q9NSB8 354 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 SPECC1L-ADORA2AF8WAN1 911 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 SURF6O75683 361 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 CDKL5O76039 1030 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 SLC4A2P04920 1241 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 HNRNPH2P55795 449 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 RNASELQ05823 741 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 EID1Q9Y6B2 187 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 NDC80O14777 642 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 PFDN1O60925 122 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 GNAI2P04899 355 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 TBC1D31Q96DN5 1066 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 SEC62Q99442 399 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 H7C1D1 291 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 SMC6Q96SB8 1091 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 CABS1Q96KC9 395 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 SLFN5Q08AF3 891 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 ZNF287Q9HBT7 754 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 KRT85P78386 507 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 STX6O43752 255 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 C6orf118Q5T5N4 469 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 SHANK2Q9UPX8 1470 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 CCT4P50991 539 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 SNW1Q13573 536 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 TFIP11Q9UBB9 837 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 CLUAP1Q96AJ1 413 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 SART3Q15020 963 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 CCDC170Q8IYT3 715 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 NACAP1Q9BZK3 213 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 SIL1Q9H173 461 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 NKTRP30414 1462 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 LRRD1A4D1F6 860 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 K7ELQ4 463 aaPredicted RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 NEBLO76041 1014 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 POTEDQ86YR6 584 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 CHMP7Q8WUX9 453 aaPredicted RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 MOV10L1Q9BXT6 1211 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 HDAC1Q13547 482 aaPredicted RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 VCX3BQ9H321 246 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 VCX3AQ9NNX9 186 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 PPP1R2P41236 205 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 VAV2P52735 878 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 MAP3K9P80192 1104 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 FKBP15Q5T1M5 1219 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 CCDC183Q5T5S1 534 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 TMTC1Q8IUR5 882 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 STK24Q9Y6E0 443 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 RASSF8Q8NHQ8 419 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 SH3GL3Q99963 347 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 GNL3LQ9NVN8 582 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 FSD2A1L4K1 749 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 G3V3G9 751 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 SSBP05455 408 aaKnown RBP eCLIP3.88□□□□□ -1.79
NEB-218ENST00000603639 DESP17661 470 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 DCAF8Q5TAQ9 597 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 MYRIPQ8NFW9 859 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 FOXD4L1Q9NU39 408 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 H0Y626 953 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 HIP1RO75146 1068 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 TRIM16O95361 564 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 RRP1P56182 461 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 RIOK1Q9BRS2 568 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 NOB1Q9ULX3 412 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 NLRP5P59047 1200 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 LARP1Q6PKG0 1096 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 MICALL1Q8N3F8 863 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 L3MBTL2Q969R5 705 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 MAK16Q9BXY0 300 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 SENP3Q9H4L4 574 aaPredicted RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 SOGA1O94964 1423 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 ANKRD24Q8TF21 1146 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 GOLGA1Q92805 767 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 LUC7L2Q9Y383 392 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 ANAPC15P60006 121 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 KRR1Q13601 381 aaKnown RBP3.88□□□□□ -1.79
NEB-218ENST00000603639 USP48Q86UV5 1035 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 SMARCC2Q8TAQ2 1214 aa3.88□□□□□ -1.79
NEB-218ENST00000603639 ANKRD27Q96NW4 1050 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms