RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 COL24A1Q17RW2 1714 aa16.72■□□□□ 0.27
SRRM1-223ENST00000600523 DDX58O95786 925 aaKnown RBP16.71■□□□□ 0.27
SRRM1-223ENST00000600523 TM4SF1P30408 202 aa16.71■□□□□ 0.27
SRRM1-223ENST00000600523 EXOSC9Q06265 439 aaKnown RBP16.71■□□□□ 0.27
SRRM1-223ENST00000600523 HSP90AB3PQ58FF7 597 aa16.71■□□□□ 0.27
SRRM1-223ENST00000600523 COPS6Q7L5N1 327 aa16.71■□□□□ 0.27
SRRM1-223ENST00000600523 XAGE3Q8WTP9 111 aa16.71■□□□□ 0.27
SRRM1-223ENST00000600523 SYT17Q9BSW7 474 aa16.71■□□□□ 0.27
SRRM1-223ENST00000600523 CARMIL3Q8ND23 1372 aa16.71■□□□□ 0.27
SRRM1-223ENST00000600523 ANXA1P04083 346 aa16.7■□□□□ 0.26
SRRM1-223ENST00000600523 PDIA6Q15084 440 aa16.7■□□□□ 0.26
SRRM1-223ENST00000600523 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
SRRM1-223ENST00000600523 TSPYL6Q8N831 410 aa16.7■□□□□ 0.26
SRRM1-223ENST00000600523 ZBTB3Q9H5J0 574 aa16.7■□□□□ 0.26
SRRM1-223ENST00000600523 BCL2L12Q9HB09 334 aa16.7■□□□□ 0.26
SRRM1-223ENST00000600523 NIP7Q9Y221 180 aaKnown RBP eCLIP16.7■□□□□ 0.26
SRRM1-223ENST00000600523 SCN7AQ01118 1682 aa16.69■□□□□ 0.26
SRRM1-223ENST00000600523 POLRMTO00411 1230 aaKnown RBP16.69■□□□□ 0.26
SRRM1-223ENST00000600523 SERPINB2P05120 415 aa16.69■□□□□ 0.26
SRRM1-223ENST00000600523 GTF2E1P29083 439 aaPredicted RBP16.69■□□□□ 0.26
SRRM1-223ENST00000600523 SLFN5Q08AF3 891 aa16.69■□□□□ 0.26
SRRM1-223ENST00000600523 PROSER3Q2NL68 480 aa16.69■□□□□ 0.26
SRRM1-223ENST00000600523 TTLL7Q6ZT98 887 aa16.69■□□□□ 0.26
SRRM1-223ENST00000600523 ST5P78524 1137 aa16.68■□□□□ 0.26
SRRM1-223ENST00000600523 DDR1Q08345 913 aa16.68■□□□□ 0.26
SRRM1-223ENST00000600523 ANKRD13DQ6ZTN6 518 aa16.68■□□□□ 0.26
SRRM1-223ENST00000600523 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
SRRM1-223ENST00000600523 NYXQ9GZU5 481 aa16.68■□□□□ 0.26
SRRM1-223ENST00000600523 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
SRRM1-223ENST00000600523 TPTE2Q6XPS3 522 aa16.67■□□□□ 0.26
SRRM1-223ENST00000600523 GIGYF2Q6Y7W6 1299 aaKnown RBP16.67■□□□□ 0.26
SRRM1-223ENST00000600523 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
SRRM1-223ENST00000600523 CNBD1Q8NA66 436 aa16.67■□□□□ 0.26
SRRM1-223ENST00000600523 PLBD2Q8NHP8 589 aa16.67■□□□□ 0.26
SRRM1-223ENST00000600523 VAMP4O75379 141 aa16.66■□□□□ 0.26
SRRM1-223ENST00000600523 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
SRRM1-223ENST00000600523 TGFB2P61812 414 aa16.66■□□□□ 0.26
SRRM1-223ENST00000600523 HLFQ16534 295 aa16.66■□□□□ 0.26
SRRM1-223ENST00000600523 ZNF428Q96B54 188 aa16.66■□□□□ 0.26
SRRM1-223ENST00000600523 BCORQ6W2J9 1755 aa16.66■□□□□ 0.26
SRRM1-223ENST00000600523 PARP10Q53GL7 1025 aa16.65■□□□□ 0.26
SRRM1-223ENST00000600523 LRP10Q7Z4F1 713 aa16.65■□□□□ 0.26
SRRM1-223ENST00000600523 PPP1R42Q7Z4L9 355 aa16.65■□□□□ 0.26
SRRM1-223ENST00000600523 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
SRRM1-223ENST00000600523 ATP10DQ9P241 1426 aa16.64■□□□□ 0.25
SRRM1-223ENST00000600523 CT47B1P0C2W7 299 aaPredicted RBP16.64■□□□□ 0.25
SRRM1-223ENST00000600523 GPTP24298 496 aa16.64■□□□□ 0.25
SRRM1-223ENST00000600523 CDCA7LQ96GN5 454 aa16.64■□□□□ 0.25
SRRM1-223ENST00000600523 C10orf71Q711Q0 1435 aa16.63■□□□□ 0.25
SRRM1-223ENST00000600523 TCERG1O14776 1098 aaKnown RBP16.63■□□□□ 0.25
SRRM1-223ENST00000600523 PDE6BP35913 854 aa16.63■□□□□ 0.25
SRRM1-223ENST00000600523 TCIRG1Q13488 830 aa16.63■□□□□ 0.25
SRRM1-223ENST00000600523 ZBED9Q6R2W3 1325 aa16.63■□□□□ 0.25
SRRM1-223ENST00000600523 FAM177BA6PVY3 158 aa16.62■□□□□ 0.25
SRRM1-223ENST00000600523 NEXNQ0ZGT2 675 aa16.62■□□□□ 0.25
SRRM1-223ENST00000600523 GPR162Q16538 588 aa16.62■□□□□ 0.25
SRRM1-223ENST00000600523 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
SRRM1-223ENST00000600523 BRIP1Q9BX63 1249 aa16.62■□□□□ 0.25
SRRM1-223ENST00000600523 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
SRRM1-223ENST00000600523 H0YIN7 160 aa16.61■□□□□ 0.25
SRRM1-223ENST00000600523 FKBP5Q13451 457 aaPredicted RBP16.61■□□□□ 0.25
SRRM1-223ENST00000600523 PRR5LQ6MZQ0 368 aa16.61■□□□□ 0.25
SRRM1-223ENST00000600523 ZNF34Q8IZ26 560 aa16.61■□□□□ 0.25
SRRM1-223ENST00000600523 NLGN2Q8NFZ4 835 aa16.61■□□□□ 0.25
SRRM1-223ENST00000600523 UTP14AQ9BVJ6 771 aaKnown RBP16.61■□□□□ 0.25
SRRM1-223ENST00000600523 FLIIQ13045 1269 aa16.6■□□□□ 0.25
SRRM1-223ENST00000600523 KSR2Q6VAB6 950 aa16.6■□□□□ 0.25
SRRM1-223ENST00000600523 TRMT2AQ8IZ69 625 aaKnown RBP16.6■□□□□ 0.25
SRRM1-223ENST00000600523 RNF123Q5XPI4 1314 aa16.6■□□□□ 0.25
SRRM1-223ENST00000600523 IBTKQ9P2D0 1353 aaPredicted RBP16.6■□□□□ 0.25
SRRM1-223ENST00000600523 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
SRRM1-223ENST00000600523 HSP90B1P14625 803 aaKnown RBP16.59■□□□□ 0.25
SRRM1-223ENST00000600523 PIM2Q9P1W9 311 aa16.59■□□□□ 0.25
SRRM1-223ENST00000600523 MAP3K2Q9Y2U5 619 aa16.59■□□□□ 0.25
SRRM1-223ENST00000600523 NUP98P52948 1817 aa16.59■□□□□ 0.25
SRRM1-223ENST00000600523 A0A0G2JLW4 131 aa16.58■□□□□ 0.24
SRRM1-223ENST00000600523 PI4KAP2A4QPH2 592 aa16.58■□□□□ 0.24
SRRM1-223ENST00000600523 DPEP1P16444 411 aa16.58■□□□□ 0.24
SRRM1-223ENST00000600523 ALDH1L2Q3SY69 923 aa16.58■□□□□ 0.24
SRRM1-223ENST00000600523 C2CD5Q86YS7 1000 aa16.58■□□□□ 0.24
SRRM1-223ENST00000600523 PI4KAP1Q8N8J0 262 aa16.58■□□□□ 0.24
SRRM1-223ENST00000600523 TRMT112Q9UI30 125 aaKnown RBP16.58■□□□□ 0.24
SRRM1-223ENST00000600523 GRIN3BO60391 1043 aa16.57■□□□□ 0.24
SRRM1-223ENST00000600523 NLRP10Q86W26 655 aa16.57■□□□□ 0.24
SRRM1-223ENST00000600523 MYD88Q99836 296 aa16.57■□□□□ 0.24
SRRM1-223ENST00000600523 METTL22Q9BUU2 404 aaPredicted RBP16.57■□□□□ 0.24
SRRM1-223ENST00000600523 NRXN2Q9P2S2 1712 aa16.56■□□□□ 0.24
SRRM1-223ENST00000600523 UBN2Q6ZU65 1347 aa16.56■□□□□ 0.24
SRRM1-223ENST00000600523 SH3TC1Q8TE82 1336 aa16.56■□□□□ 0.24
SRRM1-223ENST00000600523 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
SRRM1-223ENST00000600523 TRIM28Q13263 835 aaKnown RBP16.56■□□□□ 0.24
SRRM1-223ENST00000600523 SUSD4Q5VX71 490 aa16.56■□□□□ 0.24
SRRM1-223ENST00000600523 CCDC191Q8NCU4 936 aa16.56■□□□□ 0.24
SRRM1-223ENST00000600523 SMC4Q9NTJ3 1288 aa16.56■□□□□ 0.24
SRRM1-223ENST00000600523 CACNA1FO60840 1977 aa16.56■□□□□ 0.24
SRRM1-223ENST00000600523 AFDNP55196 1824 aaKnown RBP16.56■□□□□ 0.24
SRRM1-223ENST00000600523 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
SRRM1-223ENST00000600523 PXDNLA1KZ92 1463 aa16.55■□□□□ 0.24
SRRM1-223ENST00000600523 ERFEQ4G0M1 354 aa16.55■□□□□ 0.24
SRRM1-223ENST00000600523 DALRD3Q5D0E6 543 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms