RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 G2E3Q7L622 706 aa16.01■□□□□ 0.15
ZNF548-210ENST00000600442 DNAAF4Q8WXU2 420 aa16.01■□□□□ 0.15
ZNF548-210ENST00000600442 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
ZNF548-210ENST00000600442 SRCIN1Q9C0H9 1055 aa16.01■□□□□ 0.15
ZNF548-210ENST00000600442 ATG3Q9NT62 314 aa16.01■□□□□ 0.15
ZNF548-210ENST00000600442 CCNL1Q9UK58 526 aaPredicted RBP16.01■□□□□ 0.15
ZNF548-210ENST00000600442 TNNQ9UQP3 1299 aa16.01■□□□□ 0.15
ZNF548-210ENST00000600442 CEP350Q5VT06 3117 aa16.01■□□□□ 0.15
ZNF548-210ENST00000600442 RIC3Q7Z5B4 369 aa16■□□□□ 0.15
ZNF548-210ENST00000600442 COL23A1Q86Y22 540 aaPredicted RBP16■□□□□ 0.15
ZNF548-210ENST00000600442 PXDNLA1KZ92 1463 aa15.99■□□□□ 0.15
ZNF548-210ENST00000600442 MSH5O43196 834 aa15.99■□□□□ 0.15
ZNF548-210ENST00000600442 MYL6BP14649 208 aa15.99■□□□□ 0.15
ZNF548-210ENST00000600442 YBX3P16989 372 aaKnown RBP eCLIP15.99■□□□□ 0.15
ZNF548-210ENST00000600442 HDAC1Q13547 482 aaPredicted RBP15.99■□□□□ 0.15
ZNF548-210ENST00000600442 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
ZNF548-210ENST00000600442 ASAP1Q9ULH1 1129 aa15.99■□□□□ 0.15
ZNF548-210ENST00000600442 USP16Q9Y5T5 823 aa15.99■□□□□ 0.15
ZNF548-210ENST00000600442 PI4KAP2A4QPH2 592 aa15.98■□□□□ 0.15
ZNF548-210ENST00000600442 GRIN3BO60391 1043 aa15.98■□□□□ 0.15
ZNF548-210ENST00000600442 HMMRO75330 724 aa15.98■□□□□ 0.15
ZNF548-210ENST00000600442 ALDH1L1O75891 902 aa15.98■□□□□ 0.15
ZNF548-210ENST00000600442 PI4KAP1Q8N8J0 262 aa15.98■□□□□ 0.15
ZNF548-210ENST00000600442 ZBTB47Q9UFB7 747 aaPredicted RBP15.98■□□□□ 0.15
ZNF548-210ENST00000600442 CACNA1FO60840 1977 aa15.97■□□□□ 0.15
ZNF548-210ENST00000600442 F6X3S4 739 aa15.97■□□□□ 0.15
ZNF548-210ENST00000600442 GNAI2P04899 355 aa15.97■□□□□ 0.15
ZNF548-210ENST00000600442 AIMP1Q12904 312 aaKnown RBP15.97■□□□□ 0.15
ZNF548-210ENST00000600442 ANKRD13DQ6ZTN6 518 aa15.97■□□□□ 0.15
ZNF548-210ENST00000600442 RPAP2Q8IXW5 612 aaPredicted RBP15.97■□□□□ 0.15
ZNF548-210ENST00000600442 TAF1LQ8IZX4 1826 aa15.96■□□□□ 0.15
ZNF548-210ENST00000600442 PRAMEF22A3QJZ6 481 aa15.96■□□□□ 0.15
ZNF548-210ENST00000600442 UBTFL1P0CB47 393 aaPredicted RBP15.96■□□□□ 0.15
ZNF548-210ENST00000600442 COPS6Q7L5N1 327 aa15.96■□□□□ 0.15
ZNF548-210ENST00000600442 XAGE3Q8WTP9 111 aa15.96■□□□□ 0.15
ZNF548-210ENST00000600442 MAP3K2Q9Y2U5 619 aa15.96■□□□□ 0.15
ZNF548-210ENST00000600442 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.14
ZNF548-210ENST00000600442 C5P01031 1676 aa15.95■□□□□ 0.14
ZNF548-210ENST00000600442 PDIA6Q15084 440 aa15.95■□□□□ 0.14
ZNF548-210ENST00000600442 MSL1Q68DK7 614 aa15.95■□□□□ 0.14
ZNF548-210ENST00000600442 KIF6Q6ZMV9 814 aa15.95■□□□□ 0.14
ZNF548-210ENST00000600442 LINS1Q8NG48 757 aa15.95■□□□□ 0.14
ZNF548-210ENST00000600442 C9orf78Q9NZ63 289 aaPredicted RBP15.95■□□□□ 0.14
ZNF548-210ENST00000600442 PCDHB15Q9Y5E8 787 aa15.95■□□□□ 0.14
ZNF548-210ENST00000600442 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
ZNF548-210ENST00000600442 ATP10DQ9P241 1426 aa15.94■□□□□ 0.14
ZNF548-210ENST00000600442 PLBD2Q8NHP8 589 aa15.94■□□□□ 0.14
ZNF548-210ENST00000600442 GCC1Q96CN9 775 aa15.94■□□□□ 0.14
ZNF548-210ENST00000600442 KCPQ6ZWJ8 1503 aa15.94■□□□□ 0.14
ZNF548-210ENST00000600442 ANXA1P04083 346 aa15.93■□□□□ 0.14
ZNF548-210ENST00000600442 PROSER3Q2NL68 480 aa15.93■□□□□ 0.14
ZNF548-210ENST00000600442 BEND3Q5T5X7 828 aa15.93■□□□□ 0.14
ZNF548-210ENST00000600442 ITGB4P16144 1822 aa15.92■□□□□ 0.14
ZNF548-210ENST00000600442 IBTKQ9P2D0 1353 aaPredicted RBP15.92■□□□□ 0.14
ZNF548-210ENST00000600442 LOC102724428A0A0B4J2F2 783 aa15.92■□□□□ 0.14
ZNF548-210ENST00000600442 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
ZNF548-210ENST00000600442 SIK1P57059 783 aa15.92■□□□□ 0.14
ZNF548-210ENST00000600442 DNAJC10Q8IXB1 793 aa15.92■□□□□ 0.14
ZNF548-210ENST00000600442 METTL22Q9BUU2 404 aaPredicted RBP15.92■□□□□ 0.14
ZNF548-210ENST00000600442 CD2APQ9Y5K6 639 aa15.92■□□□□ 0.14
ZNF548-210ENST00000600442 PALLDQ8WX93 1383 aa15.91■□□□□ 0.14
ZNF548-210ENST00000600442 A1BGP04217 495 aa15.91■□□□□ 0.14
ZNF548-210ENST00000600442 IFFO2Q5TF58 517 aa15.91■□□□□ 0.14
ZNF548-210ENST00000600442 ADCY9O60503 1353 aa15.9■□□□□ 0.14
ZNF548-210ENST00000600442 IGHDP01880 384 aa15.9■□□□□ 0.14
ZNF548-210ENST00000600442 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
ZNF548-210ENST00000600442 HSP90AB3PQ58FF7 597 aa15.9■□□□□ 0.14
ZNF548-210ENST00000600442 ANKRD44Q8N8A2 993 aa15.9■□□□□ 0.14
ZNF548-210ENST00000600442 FLAD1Q8NFF5 587 aa15.9■□□□□ 0.14
ZNF548-210ENST00000600442 MEIS3Q99687 375 aa15.9■□□□□ 0.14
ZNF548-210ENST00000600442 TOGARAM1Q9Y4F4 1720 aa15.89■□□□□ 0.13
ZNF548-210ENST00000600442 IL6STP40189 918 aaPredicted RBP15.89■□□□□ 0.13
ZNF548-210ENST00000600442 ZNF330Q9Y3S2 320 aaPredicted RBP15.89■□□□□ 0.13
ZNF548-210ENST00000600442 UBR2Q8IWV8 1755 aa15.89■□□□□ 0.13
ZNF548-210ENST00000600442 LAMB4A4D0S4 1761 aa15.88■□□□□ 0.13
ZNF548-210ENST00000600442 A0A087WZG4 1122 aa15.88■□□□□ 0.13
ZNF548-210ENST00000600442 NBPF26B4DH59 902 aa15.88■□□□□ 0.13
ZNF548-210ENST00000600442 NBPF10Q6P3W6 841 aaKnown RBP15.88■□□□□ 0.13
ZNF548-210ENST00000600442 NBPF15Q8N660 670 aa15.88■□□□□ 0.13
ZNF548-210ENST00000600442 USP44Q9H0E7 712 aa15.88■□□□□ 0.13
ZNF548-210ENST00000600442 CCDC87Q9NVE4 849 aa15.88■□□□□ 0.13
ZNF548-210ENST00000600442 UBR3Q6ZT12 1888 aa15.88■□□□□ 0.13
ZNF548-210ENST00000600442 GRM8O00222 908 aa15.87■□□□□ 0.13
ZNF548-210ENST00000600442 SMC5Q8IY18 1101 aa15.87■□□□□ 0.13
ZNF548-210ENST00000600442 MYD88Q99836 296 aa15.87■□□□□ 0.13
ZNF548-210ENST00000600442 C1orf115Q9H7X2 142 aa15.87■□□□□ 0.13
ZNF548-210ENST00000600442 GPBP1L1Q9HC44 474 aaPredicted RBP15.87■□□□□ 0.13
ZNF548-210ENST00000600442 C4BP0C0L5 1744 aa15.87■□□□□ 0.13
ZNF548-210ENST00000600442 HSP90AB4PQ58FF6 505 aa15.86■□□□□ 0.13
ZNF548-210ENST00000600442 CEP85Q6P2H3 762 aa15.86■□□□□ 0.13
ZNF548-210ENST00000600442 LRP10Q7Z4F1 713 aa15.86■□□□□ 0.13
ZNF548-210ENST00000600442 NEURL1BA8MQ27 555 aa15.85■□□□□ 0.13
ZNF548-210ENST00000600442 ERVV-1B6SEH8 477 aa15.85■□□□□ 0.13
ZNF548-210ENST00000600442 AMIGO3Q86WK7 504 aa15.85■□□□□ 0.13
ZNF548-210ENST00000600442 CCDC191Q8NCU4 936 aa15.85■□□□□ 0.13
ZNF548-210ENST00000600442 ZNF526Q8TF50 670 aaPredicted RBP15.85■□□□□ 0.13
ZNF548-210ENST00000600442 CWC25Q9NXE8 425 aaPredicted RBP15.85■□□□□ 0.13
ZNF548-210ENST00000600442 LRRFIP2Q9Y608 721 aaKnown RBP15.85■□□□□ 0.13
ZNF548-210ENST00000600442 HSP90B1P14625 803 aaKnown RBP15.84■□□□□ 0.13
ZNF548-210ENST00000600442 CRKLP46109 303 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms