RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 SOGA3Q5TF21 947 aa20.15■□□□□ 0.82
XRCC1-209ENST00000599693 PRPF40BQ6NWY9 871 aaKnown RBP20.15■□□□□ 0.82
XRCC1-209ENST00000599693 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
XRCC1-209ENST00000599693 CEMIPQ8WUJ3 1361 aa20.15■□□□□ 0.82
XRCC1-209ENST00000599693 SRGNP10124 158 aa20.14■□□□□ 0.81
XRCC1-209ENST00000599693 DDNO94850 711 aaPredicted RBP20.13■□□□□ 0.81
XRCC1-209ENST00000599693 MASTLQ96GX5 879 aa20.13■□□□□ 0.81
XRCC1-209ENST00000599693 NPC1L1Q9UHC9 1359 aa20.12■□□□□ 0.81
XRCC1-209ENST00000599693 SCN4AP35499 1836 aa20.12■□□□□ 0.81
XRCC1-209ENST00000599693 POTEIP0CG38 1075 aa20.12■□□□□ 0.81
XRCC1-209ENST00000599693 POTEJP0CG39 1038 aa20.12■□□□□ 0.81
XRCC1-209ENST00000599693 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
XRCC1-209ENST00000599693 MKRN1Q9UHC7 482 aaKnown RBP20.12■□□□□ 0.81
XRCC1-209ENST00000599693 IQCA1LA6NCM1 817 aa20.1■□□□□ 0.81
XRCC1-209ENST00000599693 KCNQ3O43525 872 aa20.1■□□□□ 0.81
XRCC1-209ENST00000599693 BTBD11A6QL63 1104 aa20.09■□□□□ 0.81
XRCC1-209ENST00000599693 LDHDQ86WU2 507 aa20.09■□□□□ 0.81
XRCC1-209ENST00000599693 L3MBTL3Q96JM7 780 aaPredicted RBP20.09■□□□□ 0.81
XRCC1-209ENST00000599693 CNTNAP1P78357 1384 aa20.08■□□□□ 0.81
XRCC1-209ENST00000599693 CCDC93Q567U6 631 aa20.08■□□□□ 0.81
XRCC1-209ENST00000599693 CLEC4GQ6UXB4 293 aa20.08■□□□□ 0.81
XRCC1-209ENST00000599693 NBPF5PQ86XG9 351 aaPredicted RBP20.08■□□□□ 0.81
XRCC1-209ENST00000599693 CCER1Q8TC90 406 aaPredicted RBP20.08■□□□□ 0.81
XRCC1-209ENST00000599693 C7orf43Q8WVR3 580 aa20.08■□□□□ 0.81
XRCC1-209ENST00000599693 PASKQ96RG2 1323 aa20.07■□□□□ 0.8
XRCC1-209ENST00000599693 PIP4K2AP48426 406 aaPredicted RBP20.07■□□□□ 0.8
XRCC1-209ENST00000599693 TAF1DQ9H5J8 278 aaPredicted RBP20.07■□□□□ 0.8
XRCC1-209ENST00000599693 ZNF652Q9Y2D9 606 aa20.07■□□□□ 0.8
XRCC1-209ENST00000599693 USP16Q9Y5T5 823 aa20.07■□□□□ 0.8
XRCC1-209ENST00000599693 NPR1P16066 1061 aa20.06■□□□□ 0.8
XRCC1-209ENST00000599693 PRKAR2BP31323 418 aa20.06■□□□□ 0.8
XRCC1-209ENST00000599693 PHACTR3Q96KR7 559 aa20.06■□□□□ 0.8
XRCC1-209ENST00000599693 FKBP4Q02790 459 aaKnown RBP eCLIP20.05■□□□□ 0.8
XRCC1-209ENST00000599693 CNGB1Q14028 1251 aaPredicted RBP20.05■□□□□ 0.8
XRCC1-209ENST00000599693 RSPH6AQ9H0K4 717 aa20.05■□□□□ 0.8
XRCC1-209ENST00000599693 ADAMTSL1Q8N6G6 1762 aa20.04■□□□□ 0.8
XRCC1-209ENST00000599693 PRAMEF22A3QJZ6 481 aa20.04■□□□□ 0.8
XRCC1-209ENST00000599693 KLRG2A4D1S0 409 aaPredicted RBP20.04■□□□□ 0.8
XRCC1-209ENST00000599693 FOXN1O15353 648 aa20.04■□□□□ 0.8
XRCC1-209ENST00000599693 ZNF541Q9H0D2 1346 aa20.03■□□□□ 0.8
XRCC1-209ENST00000599693 RGL2O15211 777 aa20.03■□□□□ 0.8
XRCC1-209ENST00000599693 SNRPA1P09661 255 aaKnown RBP20.03■□□□□ 0.8
XRCC1-209ENST00000599693 TMEM88BA6NKF7 163 aa20.02■□□□□ 0.8
XRCC1-209ENST00000599693 TPTE2Q6XPS3 522 aa20.02■□□□□ 0.8
XRCC1-209ENST00000599693 ZNF277Q9NRM2 450 aaPredicted RBP20.02■□□□□ 0.8
XRCC1-209ENST00000599693 ITGBL1O95965 494 aaPredicted RBP20.01■□□□□ 0.79
XRCC1-209ENST00000599693 EAPPQ56P03 285 aaPredicted RBP20.01■□□□□ 0.79
XRCC1-209ENST00000599693 RTKN2Q8IZC4 609 aa20.01■□□□□ 0.79
XRCC1-209ENST00000599693 CFAP53Q96M91 514 aa20.01■□□□□ 0.79
XRCC1-209ENST00000599693 PRDM10Q9NQV6 1147 aa20.01■□□□□ 0.79
XRCC1-209ENST00000599693 HACL1Q9UJ83 578 aa20.01■□□□□ 0.79
XRCC1-209ENST00000599693 NIP7Q9Y221 180 aaKnown RBP eCLIP20.01■□□□□ 0.79
XRCC1-209ENST00000599693 LAMB4A4D0S4 1761 aa20■□□□□ 0.79
XRCC1-209ENST00000599693 OLFM4Q6UX06 510 aa20■□□□□ 0.79
XRCC1-209ENST00000599693 NBPF26B4DH59 902 aa19.99■□□□□ 0.79
XRCC1-209ENST00000599693 VEGFBP49765 207 aa19.99■□□□□ 0.79
XRCC1-209ENST00000599693 NBPF10Q6P3W6 841 aaKnown RBP19.99■□□□□ 0.79
XRCC1-209ENST00000599693 MCM10Q7L590 875 aa19.99■□□□□ 0.79
XRCC1-209ENST00000599693 NBPF15Q8N660 670 aa19.99■□□□□ 0.79
XRCC1-209ENST00000599693 RTF1Q92541 710 aaKnown RBP19.99■□□□□ 0.79
XRCC1-209ENST00000599693 AIDAQ96BJ3 306 aa19.99■□□□□ 0.79
XRCC1-209ENST00000599693 EPHX2P34913 555 aa19.98■□□□□ 0.79
XRCC1-209ENST00000599693 CTCFP49711 727 aaPredicted RBP19.98■□□□□ 0.79
XRCC1-209ENST00000599693 CLEC11AQ9Y240 323 aa19.98■□□□□ 0.79
XRCC1-209ENST00000599693 NUDCQ9Y266 331 aa19.98■□□□□ 0.79
XRCC1-209ENST00000599693 SNED1Q8TER0 1413 aa19.97■□□□□ 0.79
XRCC1-209ENST00000599693 FAM177BA6PVY3 158 aa19.97■□□□□ 0.79
XRCC1-209ENST00000599693 FZD9O00144 591 aa19.97■□□□□ 0.79
XRCC1-209ENST00000599693 ALDH1B1P30837 517 aa19.97■□□□□ 0.79
XRCC1-209ENST00000599693 IARSP41252 1262 aaKnown RBP19.97■□□□□ 0.79
XRCC1-209ENST00000599693 RNF123Q5XPI4 1314 aa19.97■□□□□ 0.79
XRCC1-209ENST00000599693 PNMA8AQ86V59 439 aaPredicted RBP19.96■□□□□ 0.79
XRCC1-209ENST00000599693 SYNE4Q8N205 404 aa19.96■□□□□ 0.79
XRCC1-209ENST00000599693 U2AF1L5P0DN76 240 aaPredicted RBP19.95■□□□□ 0.78
XRCC1-209ENST00000599693 U2AF1Q01081 240 aaKnown RBP eCLIP19.95■□□□□ 0.78
XRCC1-209ENST00000599693 HLFQ16534 295 aa19.95■□□□□ 0.78
XRCC1-209ENST00000599693 GPC2Q8N158 579 aa19.95■□□□□ 0.78
XRCC1-209ENST00000599693 WBP1LQ9NX94 342 aa19.95■□□□□ 0.78
XRCC1-209ENST00000599693 RASSF10A6NK89 507 aa19.94■□□□□ 0.78
XRCC1-209ENST00000599693 HTATSF1O43719 755 aaKnown RBP19.94■□□□□ 0.78
XRCC1-209ENST00000599693 GTF2E1P29083 439 aaPredicted RBP19.94■□□□□ 0.78
XRCC1-209ENST00000599693 DCTN1Q14203 1278 aa19.94■□□□□ 0.78
XRCC1-209ENST00000599693 CNTROBQ8N137 903 aa19.94■□□□□ 0.78
XRCC1-209ENST00000599693 PSMD1Q99460 953 aa19.94■□□□□ 0.78
XRCC1-209ENST00000599693 ABCC12Q96J65 1359 aa19.94■□□□□ 0.78
XRCC1-209ENST00000599693 NUP98P52948 1817 aa19.93■□□□□ 0.78
XRCC1-209ENST00000599693 CRY2Q49AN0 593 aa19.93■□□□□ 0.78
XRCC1-209ENST00000599693 MAP1SQ66K74 1059 aaPredicted RBP19.93■□□□□ 0.78
XRCC1-209ENST00000599693 COL4A5P29400 1685 aa19.92■□□□□ 0.78
XRCC1-209ENST00000599693 JDP2Q8WYK2 163 aa19.92■□□□□ 0.78
XRCC1-209ENST00000599693 NYXQ9GZU5 481 aa19.92■□□□□ 0.78
XRCC1-209ENST00000599693 KDM3BQ7LBC6 1761 aa19.92■□□□□ 0.78
XRCC1-209ENST00000599693 LTBP1Q14766 1721 aa19.91■□□□□ 0.78
XRCC1-209ENST00000599693 LBX1P52954 281 aa19.91■□□□□ 0.78
XRCC1-209ENST00000599693 TAF7Q15545 349 aaPredicted RBP19.91■□□□□ 0.78
XRCC1-209ENST00000599693 DEFB115Q30KQ5 88 aa19.91■□□□□ 0.78
XRCC1-209ENST00000599693 CC2D2BQ6DHV5 1058 aa19.91■□□□□ 0.78
XRCC1-209ENST00000599693 RIC1Q4ADV7 1423 aa19.91■□□□□ 0.78
XRCC1-209ENST00000599693 EIF6P56537 245 aaKnown RBP19.9■□□□□ 0.78
XRCC1-209ENST00000599693 IBTKQ9P2D0 1353 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms