RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	FKBP5	Q13451	457 aa	Predicted RBP	13.72	□□□□□ -0.21
SUPT5H-216	ENST00000599335	USP19	O94966	1318 aa		13.72	□□□□□ -0.21
SUPT5H-216	ENST00000599335	NRK	Q7Z2Y5	1582 aa		13.71	□□□□□ -0.21
SUPT5H-216	ENST00000599335	AMOT	Q4VCS5	1084 aa		13.71	□□□□□ -0.21
SUPT5H-216	ENST00000599335	TBC1D32	Q96NH3	1257 aa		13.71	□□□□□ -0.22
SUPT5H-216	ENST00000599335	ASAP1	Q9ULH1	1129 aa		13.71	□□□□□ -0.22
SUPT5H-216	ENST00000599335	MSL1	Q68DK7	614 aa		13.7	□□□□□ -0.22
SUPT5H-216	ENST00000599335	PTF1A	Q7RTS3	328 aa		13.7	□□□□□ -0.22
SUPT5H-216	ENST00000599335	MSN	P26038	577 aa	Known RBP	13.7	□□□□□ -0.22
SUPT5H-216	ENST00000599335	BAG6	P46379	1132 aa		13.7	□□□□□ -0.22
SUPT5H-216	ENST00000599335	CCDC24	Q8N4L8	307 aa		13.7	□□□□□ -0.22
SUPT5H-216	ENST00000599335	DCC	P43146	1447 aa		13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	PRAMEF22	A3QJZ6	481 aa		13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	TRIM6-TRIM34	B2RNG4	842 aa		13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	TNNT1	P13805	278 aa		13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	TRIM34	Q9BYJ4	488 aa		13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	CCNL1	Q9UK58	526 aa	Predicted RBP	13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	G2E3	Q7L622	706 aa		13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	MEIS3	Q99687	375 aa		13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	ABCC4	O15439	1325 aa		13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	BRPF1	P55201	1214 aa	Predicted RBP	13.69	□□□□□ -0.22
SUPT5H-216	ENST00000599335	HSP90AB1	P08238	724 aa	Known RBP	13.68	□□□□□ -0.22
SUPT5H-216	ENST00000599335	VPS72	Q15906	364 aa		13.68	□□□□□ -0.22
SUPT5H-216	ENST00000599335	HSCB	Q8IWL3	235 aa		13.68	□□□□□ -0.22
SUPT5H-216	ENST00000599335	AK7	Q96M32	723 aa		13.68	□□□□□ -0.22
SUPT5H-216	ENST00000599335	NWD1	Q149M9	1564 aa		13.68	□□□□□ -0.22
SUPT5H-216	ENST00000599335	NCOA3	Q9Y6Q9	1424 aa		13.68	□□□□□ -0.22
SUPT5H-216	ENST00000599335	CYP27B1	O15528	508 aa		13.68	□□□□□ -0.22
SUPT5H-216	ENST00000599335	HSP90AB3P	Q58FF7	597 aa		13.68	□□□□□ -0.22
SUPT5H-216	ENST00000599335	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.68	□□□□□ -0.22
SUPT5H-216	ENST00000599335	SMARCA5	O60264	1052 aa	Predicted RBP	13.67	□□□□□ -0.22
SUPT5H-216	ENST00000599335	SSR1	P43307	286 aa	Known RBP	13.67	□□□□□ -0.22
SUPT5H-216	ENST00000599335	CBX1	P83916	185 aa		13.67	□□□□□ -0.22
SUPT5H-216	ENST00000599335	HDGFL1	Q5TGJ6	251 aa		13.67	□□□□□ -0.22
SUPT5H-216	ENST00000599335	SIRT2	Q8IXJ6	389 aa		13.67	□□□□□ -0.22
SUPT5H-216	ENST00000599335	MARCH10	Q8NA82	808 aa	Predicted RBP	13.67	□□□□□ -0.22
SUPT5H-216	ENST00000599335	TBC1D2	Q9BYX2	928 aa		13.67	□□□□□ -0.22
SUPT5H-216	ENST00000599335	TBC1D2B	Q9UPU7	963 aa		13.67	□□□□□ -0.22
SUPT5H-216	ENST00000599335	SPATA31A1	Q5TZJ5	1347 aa		13.67	□□□□□ -0.22
SUPT5H-216	ENST00000599335	FAM196A	Q6ZSG2	479 aa		13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	JARID2	Q92833	1246 aa	Predicted RBP	13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	GPT	P24298	496 aa		13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	EP400NL	Q6ZTU2	488 aa		13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	ZBTB3	Q9H5J0	574 aa		13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	PCDH11X	Q9BZA7	1347 aa		13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	PCDH11Y	Q9BZA8	1340 aa		13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	LTBP4	Q8N2S1	1624 aa		13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	TAF7	Q15545	349 aa	Predicted RBP	13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	CCDC30	Q5VVM6	783 aa		13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	FOXD4L1	Q9NU39	408 aa		13.66	□□□□□ -0.22
SUPT5H-216	ENST00000599335	GNPAT	O15228	680 aa		13.65	□□□□□ -0.22
SUPT5H-216	ENST00000599335	HMMR	O75330	724 aa		13.65	□□□□□ -0.22
SUPT5H-216	ENST00000599335	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.65	□□□□□ -0.22
SUPT5H-216	ENST00000599335	KDR	P35968	1356 aa		13.65	□□□□□ -0.22
SUPT5H-216	ENST00000599335	MMP14	P50281	582 aa		13.65	□□□□□ -0.22
SUPT5H-216	ENST00000599335	ROBO1	Q9Y6N7	1651 aa		13.65	□□□□□ -0.22
SUPT5H-216	ENST00000599335	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.65	□□□□□ -0.23
SUPT5H-216	ENST00000599335	PTPRC	P08575	1304 aa		13.64	□□□□□ -0.23
SUPT5H-216	ENST00000599335	SPATA31A5	Q5VU36	1347 aa		13.64	□□□□□ -0.23
SUPT5H-216	ENST00000599335	SPATA31A7	Q8IWB4	1347 aa		13.64	□□□□□ -0.23
SUPT5H-216	ENST00000599335	CCDC66	A2RUB6	948 aa		13.64	□□□□□ -0.23
SUPT5H-216	ENST00000599335	PHKG2	P15735	406 aa		13.64	□□□□□ -0.23
SUPT5H-216	ENST00000599335	INTS3	Q68E01	1043 aa	Known RBP	13.64	□□□□□ -0.23
SUPT5H-216	ENST00000599335	MED1	Q15648	1581 aa	Predicted RBP	13.64	□□□□□ -0.23
SUPT5H-216	ENST00000599335	NFAT5	O94916	1531 aa		13.64	□□□□□ -0.23
SUPT5H-216	ENST00000599335	LOC102724159	A0A0B4J2E5	919 aa		13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	PWP2	Q15269	919 aa	Known RBP	13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	ILDR2	Q71H61	639 aa		13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	DNAJC10	Q8IXB1	793 aa		13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	AKAP4	Q5JQC9	854 aa		13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	RIC3	Q7Z5B4	369 aa		13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	FLII	Q13045	1269 aa		13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	BMP2KL	Q5H9B9	411 aa		13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	DCAF5	Q96JK2	942 aa		13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	MAP3K5	Q99683	1374 aa		13.63	□□□□□ -0.23
SUPT5H-216	ENST00000599335	RNMT	O43148	476 aa	Known RBP	13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	A1BG	P04217	495 aa		13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	SEMA3F	Q13275	785 aa		13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	PXDN	Q92626	1479 aa		13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	R3HDM1	Q15032	1099 aa	Known RBP	13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	PHAX	Q9H814	394 aa	Known RBP	13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	EXOC6B	Q9Y2D4	811 aa		13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	CCT4	P50991	539 aa	Known RBP	13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	CEP85	Q6P2H3	762 aa		13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	TBC1D9	Q6ZT07	1266 aa		13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	ANKRD44	Q8N8A2	993 aa		13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.62	□□□□□ -0.23
SUPT5H-216	ENST00000599335	ZBTB7A	O95365	584 aa		13.61	□□□□□ -0.23
SUPT5H-216	ENST00000599335	EZH2	Q15910	746 aa	Known RBP	13.61	□□□□□ -0.23
SUPT5H-216	ENST00000599335	PIGB	Q92521	554 aa		13.61	□□□□□ -0.23
SUPT5H-216	ENST00000599335	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.61	□□□□□ -0.23
SUPT5H-216	ENST00000599335	ZNF496	Q96IT1	587 aa	Predicted RBP	13.61	□□□□□ -0.23
SUPT5H-216	ENST00000599335	CDC45	O75419	566 aa		13.61	□□□□□ -0.23
SUPT5H-216	ENST00000599335	STARD3NL	O95772	234 aa		13.61	□□□□□ -0.23
SUPT5H-216	ENST00000599335	GNAI2	P04899	355 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms