RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 CAMTA2O94983 1202 aa12.13□□□□□ -0.47
FARP1-226ENST00000599040 DCTN1Q14203 1278 aa12.13□□□□□ -0.47
FARP1-226ENST00000599040 NFE2L2Q16236 605 aa12.13□□□□□ -0.47
FARP1-226ENST00000599040 C16orf71Q8IYS4 520 aaPredicted RBP12.13□□□□□ -0.47
FARP1-226ENST00000599040 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
FARP1-226ENST00000599040 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
FARP1-226ENST00000599040 KIF3CO14782 793 aa12.12□□□□□ -0.47
FARP1-226ENST00000599040 HSPA6P17066 643 aa12.12□□□□□ -0.47
FARP1-226ENST00000599040 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
FARP1-226ENST00000599040 LMOD3Q0VAK6 560 aa12.12□□□□□ -0.47
FARP1-226ENST00000599040 PRR5LQ6MZQ0 368 aa12.12□□□□□ -0.47
FARP1-226ENST00000599040 LAMB4A4D0S4 1761 aa12.12□□□□□ -0.47
FARP1-226ENST00000599040 SBF1O95248 1867 aa12.11□□□□□ -0.47
FARP1-226ENST00000599040 TOMM70O94826 608 aa12.11□□□□□ -0.47
FARP1-226ENST00000599040 LMNB1P20700 586 aa12.11□□□□□ -0.47
FARP1-226ENST00000599040 CALD1Q05682 793 aaKnown RBP12.11□□□□□ -0.47
FARP1-226ENST00000599040 NBPF5PQ86XG9 351 aaPredicted RBP12.11□□□□□ -0.47
FARP1-226ENST00000599040 ZNF622Q969S3 477 aaKnown RBP eCLIP12.11□□□□□ -0.47
FARP1-226ENST00000599040 KDM3BQ7LBC6 1761 aa12.1□□□□□ -0.47
FARP1-226ENST00000599040 CCDC27Q2M243 656 aa12.1□□□□□ -0.47
FARP1-226ENST00000599040 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
FARP1-226ENST00000599040 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
FARP1-226ENST00000599040 PLEKHF1Q96S99 279 aa12.1□□□□□ -0.47
FARP1-226ENST00000599040 ANKRD31Q8N7Z5 1873 aa12.1□□□□□ -0.47
FARP1-226ENST00000599040 TNRC6CQ9HCJ0 1690 aaKnown RBP12.1□□□□□ -0.47
FARP1-226ENST00000599040 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
FARP1-226ENST00000599040 E9PSI1 815 aa12.09□□□□□ -0.47
FARP1-226ENST00000599040 TPTE2Q6XPS3 522 aa12.09□□□□□ -0.47
FARP1-226ENST00000599040 WDR63Q8IWG1 891 aa12.09□□□□□ -0.47
FARP1-226ENST00000599040 PIP4K2AP48426 406 aaPredicted RBP12.08□□□□□ -0.48
FARP1-226ENST00000599040 APLP1P51693 650 aa12.08□□□□□ -0.48
FARP1-226ENST00000599040 RASSF7Q02833 373 aa12.08□□□□□ -0.48
FARP1-226ENST00000599040 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
FARP1-226ENST00000599040 STYK1Q6J9G0 422 aa12.08□□□□□ -0.48
FARP1-226ENST00000599040 KIF6Q6ZMV9 814 aa12.08□□□□□ -0.48
FARP1-226ENST00000599040 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
FARP1-226ENST00000599040 MASTLQ96GX5 879 aa12.08□□□□□ -0.48
FARP1-226ENST00000599040 NMRK2Q9NPI5 230 aa12.08□□□□□ -0.48
FARP1-226ENST00000599040 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
FARP1-226ENST00000599040 NIP7Q9Y221 180 aaKnown RBP eCLIP12.08□□□□□ -0.48
FARP1-226ENST00000599040 COL11A2P13942 1736 aaPredicted RBP12.07□□□□□ -0.48
FARP1-226ENST00000599040 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
FARP1-226ENST00000599040 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
FARP1-226ENST00000599040 NYXQ9GZU5 481 aa12.07□□□□□ -0.48
FARP1-226ENST00000599040 MYH16Q9H6N6 1097 aa12.07□□□□□ -0.48
FARP1-226ENST00000599040 BABAM1Q9NWV8 329 aa12.07□□□□□ -0.48
FARP1-226ENST00000599040 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
FARP1-226ENST00000599040 GTF3C3Q9Y5Q9 886 aa12.07□□□□□ -0.48
FARP1-226ENST00000599040 ERBB4Q15303 1308 aa12.07□□□□□ -0.48
FARP1-226ENST00000599040 ARFGEF2Q9Y6D5 1785 aa12.06□□□□□ -0.48
FARP1-226ENST00000599040 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
FARP1-226ENST00000599040 ERVV-1B6SEH8 477 aa12.06□□□□□ -0.48
FARP1-226ENST00000599040 C21orf2O43822 256 aa12.06□□□□□ -0.48
FARP1-226ENST00000599040 SRGNP10124 158 aa12.06□□□□□ -0.48
FARP1-226ENST00000599040 TMPOP42166 694 aaKnown RBP12.06□□□□□ -0.48
FARP1-226ENST00000599040 RIPK4P57078 832 aa12.06□□□□□ -0.48
FARP1-226ENST00000599040 FSTL1Q12841 308 aa12.06□□□□□ -0.48
FARP1-226ENST00000599040 NBPF10Q6P3W6 841 aaKnown RBP12.06□□□□□ -0.48
FARP1-226ENST00000599040 NBPF15Q8N660 670 aa12.06□□□□□ -0.48
FARP1-226ENST00000599040 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
FARP1-226ENST00000599040 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
FARP1-226ENST00000599040 NFKBIEO00221 500 aa12.05□□□□□ -0.48
FARP1-226ENST00000599040 NPR1P16066 1061 aa12.05□□□□□ -0.48
FARP1-226ENST00000599040 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
FARP1-226ENST00000599040 PRPF40BQ6NWY9 871 aaKnown RBP12.05□□□□□ -0.48
FARP1-226ENST00000599040 WWC1Q8IX03 1113 aa12.05□□□□□ -0.48
FARP1-226ENST00000599040 CCDC24Q8N4L8 307 aa12.05□□□□□ -0.48
FARP1-226ENST00000599040 THUMPD2Q9BTF0 503 aaKnown RBP12.05□□□□□ -0.48
FARP1-226ENST00000599040 TAOK3Q9H2K8 898 aa12.05□□□□□ -0.48
FARP1-226ENST00000599040 LTBP3Q9NS15 1303 aa12.05□□□□□ -0.48
FARP1-226ENST00000599040 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
FARP1-226ENST00000599040 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
FARP1-226ENST00000599040 DICER1Q9UPY3 1922 aaKnown RBP12.04□□□□□ -0.48
FARP1-226ENST00000599040 GLTPD2A6NH11 291 aa12.04□□□□□ -0.48
FARP1-226ENST00000599040 RRAGCQ9HB90 399 aa12.04□□□□□ -0.48
FARP1-226ENST00000599040 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
FARP1-226ENST00000599040 RRP7AQ9Y3A4 280 aaKnown RBP12.04□□□□□ -0.48
FARP1-226ENST00000599040 IL16Q14005 1332 aa12.04□□□□□ -0.48
FARP1-226ENST00000599040 MAP3K15Q6ZN16 1313 aa12.04□□□□□ -0.48
FARP1-226ENST00000599040 ZNF521Q96K83 1311 aa12.04□□□□□ -0.48
FARP1-226ENST00000599040 MYL6BP14649 208 aa12.03□□□□□ -0.48
FARP1-226ENST00000599040 VEGFAP15692 232 aaPredicted RBP12.03□□□□□ -0.48
FARP1-226ENST00000599040 ALDH1B1P30837 517 aa12.03□□□□□ -0.48
FARP1-226ENST00000599040 SLFN5Q08AF3 891 aa12.03□□□□□ -0.48
FARP1-226ENST00000599040 ERFEQ4G0M1 354 aa12.03□□□□□ -0.48
FARP1-226ENST00000599040 CCDC93Q567U6 631 aa12.03□□□□□ -0.48
FARP1-226ENST00000599040 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.03□□□□□ -0.48
FARP1-226ENST00000599040 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
FARP1-226ENST00000599040 IBTKQ9P2D0 1353 aaPredicted RBP12.03□□□□□ -0.48
FARP1-226ENST00000599040 NUP98P52948 1817 aa12.02□□□□□ -0.48
FARP1-226ENST00000599040 KLRG2A4D1S0 409 aaPredicted RBP12.02□□□□□ -0.49
FARP1-226ENST00000599040 FAM177BA6PVY3 158 aa12.02□□□□□ -0.49
FARP1-226ENST00000599040 HLFQ16534 295 aa12.02□□□□□ -0.49
FARP1-226ENST00000599040 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
FARP1-226ENST00000599040 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.49
FARP1-226ENST00000599040 SLX4Q8IY92 1834 aa12.02□□□□□ -0.49
FARP1-226ENST00000599040 PPP1R42Q7Z4L9 355 aa12.01□□□□□ -0.49
FARP1-226ENST00000599040 RTKN2Q8IZC4 609 aa12.01□□□□□ -0.49
FARP1-226ENST00000599040 EIF2S2P20042 333 aaKnown RBP12□□□□□ -0.49
FARP1-226ENST00000599040 PRELPP51888 382 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms