RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ANKRD31Q8N7Z5 1873 aa18.09■□□□□ 0.49
SCAF1-203ENST00000598359 FAM177BA6PVY3 158 aa18.08■□□□□ 0.48
SCAF1-203ENST00000598359 H0YIN7 160 aa18.08■□□□□ 0.48
SCAF1-203ENST00000598359 NPHP1O15259 732 aa18.08■□□□□ 0.48
SCAF1-203ENST00000598359 MYL6BP14649 208 aa18.08■□□□□ 0.48
SCAF1-203ENST00000598359 HLFQ16534 295 aa18.08■□□□□ 0.48
SCAF1-203ENST00000598359 C9orf131Q5VYM1 1079 aa18.08■□□□□ 0.48
SCAF1-203ENST00000598359 CNBD1Q8NA66 436 aa18.08■□□□□ 0.48
SCAF1-203ENST00000598359 RUNDC1Q96C34 613 aa18.08■□□□□ 0.48
SCAF1-203ENST00000598359 DLEC1Q9Y238 1755 aa18.07■□□□□ 0.48
SCAF1-203ENST00000598359 COL11A2P13942 1736 aaPredicted RBP18.07■□□□□ 0.48
SCAF1-203ENST00000598359 ZNF316A6NFI3 1004 aaPredicted RBP18.07■□□□□ 0.48
SCAF1-203ENST00000598359 RASSF7Q02833 373 aa18.07■□□□□ 0.48
SCAF1-203ENST00000598359 TTLL7Q6ZT98 887 aa18.07■□□□□ 0.48
SCAF1-203ENST00000598359 TTLL6Q8N841 843 aa18.07■□□□□ 0.48
SCAF1-203ENST00000598359 ZNF622Q969S3 477 aaKnown RBP eCLIP18.07■□□□□ 0.48
SCAF1-203ENST00000598359 BRIP1Q9BX63 1249 aa18.07■□□□□ 0.48
SCAF1-203ENST00000598359 ZNF219Q9P2Y4 722 aaPredicted RBP18.07■□□□□ 0.48
SCAF1-203ENST00000598359 TRIM35Q9UPQ4 493 aa18.07■□□□□ 0.48
SCAF1-203ENST00000598359 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
SCAF1-203ENST00000598359 CLEC4GQ6UXB4 293 aa18.06■□□□□ 0.48
SCAF1-203ENST00000598359 NBPF5PQ86XG9 351 aaPredicted RBP18.06■□□□□ 0.48
SCAF1-203ENST00000598359 NIP7Q9Y221 180 aaKnown RBP eCLIP18.06■□□□□ 0.48
SCAF1-203ENST00000598359 ZNF652Q9Y2D9 606 aa18.06■□□□□ 0.48
SCAF1-203ENST00000598359 LAS1LQ9Y4W2 734 aaKnown RBP18.06■□□□□ 0.48
SCAF1-203ENST00000598359 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
SCAF1-203ENST00000598359 PDE6BP35913 854 aa18.05■□□□□ 0.48
SCAF1-203ENST00000598359 RNF181Q9P0P0 153 aa18.05■□□□□ 0.48
SCAF1-203ENST00000598359 ST5P78524 1137 aa18.04■□□□□ 0.48
SCAF1-203ENST00000598359 KRT24Q2M2I5 525 aa18.04■□□□□ 0.48
SCAF1-203ENST00000598359 NECTIN2Q92692 538 aa18.04■□□□□ 0.48
SCAF1-203ENST00000598359 ANXA1P04083 346 aa18.03■□□□□ 0.48
SCAF1-203ENST00000598359 PRELPP51888 382 aa18.03■□□□□ 0.48
SCAF1-203ENST00000598359 CCDC184Q52MB2 194 aa18.03■□□□□ 0.48
SCAF1-203ENST00000598359 TNS4Q8IZW8 715 aa18.03■□□□□ 0.48
SCAF1-203ENST00000598359 KLRG1Q96E93 195 aa18.03■□□□□ 0.48
SCAF1-203ENST00000598359 ZBTB3Q9H5J0 574 aa18.03■□□□□ 0.48
SCAF1-203ENST00000598359 PROSER3Q2NL68 480 aa18.02■□□□□ 0.48
SCAF1-203ENST00000598359 JMYQ8N9B5 988 aa18.02■□□□□ 0.48
SCAF1-203ENST00000598359 MAP3K15Q6ZN16 1313 aa18.01■□□□□ 0.47
SCAF1-203ENST00000598359 C21orf2O43822 256 aa18.01■□□□□ 0.47
SCAF1-203ENST00000598359 GPTP24298 496 aa18.01■□□□□ 0.47
SCAF1-203ENST00000598359 HTRA3P83110 453 aa18.01■□□□□ 0.47
SCAF1-203ENST00000598359 PDIA6Q15084 440 aa18.01■□□□□ 0.47
SCAF1-203ENST00000598359 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
SCAF1-203ENST00000598359 NMRK2Q9NPI5 230 aa18.01■□□□□ 0.47
SCAF1-203ENST00000598359 NFKBIEO00221 500 aa18■□□□□ 0.47
SCAF1-203ENST00000598359 CHL1O00533 1208 aa18■□□□□ 0.47
SCAF1-203ENST00000598359 APAF1O14727 1248 aa18■□□□□ 0.47
SCAF1-203ENST00000598359 SRGNP10124 158 aa18■□□□□ 0.47
SCAF1-203ENST00000598359 BABAM1Q9NWV8 329 aa18■□□□□ 0.47
SCAF1-203ENST00000598359 ERVV-1B6SEH8 477 aa17.99■□□□□ 0.47
SCAF1-203ENST00000598359 TPTE2Q6XPS3 522 aa17.99■□□□□ 0.47
SCAF1-203ENST00000598359 LRP10Q7Z4F1 713 aa17.99■□□□□ 0.47
SCAF1-203ENST00000598359 NUTM1Q86Y26 1132 aa17.99■□□□□ 0.47
SCAF1-203ENST00000598359 RGL2O15211 777 aa17.98■□□□□ 0.47
SCAF1-203ENST00000598359 STYK1Q6J9G0 422 aa17.98■□□□□ 0.47
SCAF1-203ENST00000598359 PRPF40BQ6NWY9 871 aaKnown RBP17.98■□□□□ 0.47
SCAF1-203ENST00000598359 RBM46Q8TBY0 533 aaKnown RBP17.98■□□□□ 0.47
SCAF1-203ENST00000598359 MASTLQ96GX5 879 aa17.98■□□□□ 0.47
SCAF1-203ENST00000598359 PDZRN3Q9UPQ7 1066 aa17.98■□□□□ 0.47
SCAF1-203ENST00000598359 SBF1O95248 1867 aa17.98■□□□□ 0.47
SCAF1-203ENST00000598359 CACNA1SQ13698 1873 aa17.98■□□□□ 0.47
SCAF1-203ENST00000598359 NUP98P52948 1817 aa17.98■□□□□ 0.47
SCAF1-203ENST00000598359 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
SCAF1-203ENST00000598359 UBN2Q6ZU65 1347 aa17.98■□□□□ 0.47
SCAF1-203ENST00000598359 ABCC12Q96J65 1359 aa17.97■□□□□ 0.47
SCAF1-203ENST00000598359 GTF2E1P29083 439 aaPredicted RBP17.97■□□□□ 0.47
SCAF1-203ENST00000598359 SLX4Q8IY92 1834 aa17.97■□□□□ 0.47
SCAF1-203ENST00000598359 TNRC6CQ9HCJ0 1690 aaKnown RBP17.96■□□□□ 0.47
SCAF1-203ENST00000598359 LMNB1P20700 586 aa17.96■□□□□ 0.47
SCAF1-203ENST00000598359 AIMP1Q12904 312 aaKnown RBP17.96■□□□□ 0.47
SCAF1-203ENST00000598359 ERFEQ4G0M1 354 aa17.96■□□□□ 0.47
SCAF1-203ENST00000598359 C16orf71Q8IYS4 520 aaPredicted RBP17.96■□□□□ 0.47
SCAF1-203ENST00000598359 CNKSR1Q969H4 720 aa17.96■□□□□ 0.47
SCAF1-203ENST00000598359 SUSD4Q5VX71 490 aa17.95■□□□□ 0.46
SCAF1-203ENST00000598359 OLFM4Q6UX06 510 aa17.95■□□□□ 0.46
SCAF1-203ENST00000598359 KLRG2A4D1S0 409 aaPredicted RBP17.94■□□□□ 0.46
SCAF1-203ENST00000598359 NPR1P16066 1061 aa17.94■□□□□ 0.46
SCAF1-203ENST00000598359 GIGYF2Q6Y7W6 1299 aaKnown RBP17.94■□□□□ 0.46
SCAF1-203ENST00000598359 COPS6Q7L5N1 327 aa17.94■□□□□ 0.46
SCAF1-203ENST00000598359 ZNF34Q8IZ26 560 aa17.94■□□□□ 0.46
SCAF1-203ENST00000598359 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
SCAF1-203ENST00000598359 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
SCAF1-203ENST00000598359 CHPF2Q9P2E5 772 aa17.94■□□□□ 0.46
SCAF1-203ENST00000598359 FSTL1Q12841 308 aa17.93■□□□□ 0.46
SCAF1-203ENST00000598359 ZNF428Q96B54 188 aa17.93■□□□□ 0.46
SCAF1-203ENST00000598359 CFAP44Q96MT7 982 aa17.93■□□□□ 0.46
SCAF1-203ENST00000598359 NYXQ9GZU5 481 aa17.93■□□□□ 0.46
SCAF1-203ENST00000598359 NTSR2O95665 410 aa17.92■□□□□ 0.46
SCAF1-203ENST00000598359 HDGFL1Q5TGJ6 251 aa17.92■□□□□ 0.46
SCAF1-203ENST00000598359 C7orf43Q8WVR3 580 aa17.92■□□□□ 0.46
SCAF1-203ENST00000598359 RRAGCQ9HB90 399 aa17.92■□□□□ 0.46
SCAF1-203ENST00000598359 DDX21Q9NR30 783 aaKnown RBP eCLIP17.92■□□□□ 0.46
SCAF1-203ENST00000598359 TIAM2Q8IVF5 1701 aa17.92■□□□□ 0.46
SCAF1-203ENST00000598359 ARFGEF2Q9Y6D5 1785 aa17.91■□□□□ 0.46
SCAF1-203ENST00000598359 FER1L6Q2WGJ9 1857 aa17.91■□□□□ 0.46
SCAF1-203ENST00000598359 CCDC88AQ3V6T2 1871 aa17.91■□□□□ 0.46
SCAF1-203ENST00000598359 ZNF853P0CG23 659 aa17.91■□□□□ 0.46
SCAF1-203ENST00000598359 DUSP27Q5VZP5 1158 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms