RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 LMOD3Q0VAK6 560 aa18.49■□□□□ 0.55
C19orf54-206ENST00000596940 CCDC24Q8N4L8 307 aa18.49■□□□□ 0.55
C19orf54-206ENST00000596940 NIP7Q9Y221 180 aaKnown RBP eCLIP18.49■□□□□ 0.55
C19orf54-206ENST00000596940 C21orf2O43822 256 aa18.48■□□□□ 0.55
C19orf54-206ENST00000596940 GTF2E1P29083 439 aaPredicted RBP18.48■□□□□ 0.55
C19orf54-206ENST00000596940 EIF4A1P60842 406 aaKnown RBP18.48■□□□□ 0.55
C19orf54-206ENST00000596940 FSTL1Q12841 308 aa18.48■□□□□ 0.55
C19orf54-206ENST00000596940 DPY19L2Q6NUT2 758 aa18.48■□□□□ 0.55
C19orf54-206ENST00000596940 RRAGCQ9HB90 399 aa18.48■□□□□ 0.55
C19orf54-206ENST00000596940 GLTPD2A6NH11 291 aa18.47■□□□□ 0.55
C19orf54-206ENST00000596940 ERVV-1B6SEH8 477 aa18.47■□□□□ 0.55
C19orf54-206ENST00000596940 BABAM1Q9NWV8 329 aa18.47■□□□□ 0.55
C19orf54-206ENST00000596940 NFKBIEO00221 500 aa18.46■□□□□ 0.55
C19orf54-206ENST00000596940 NPR1P16066 1061 aa18.46■□□□□ 0.55
C19orf54-206ENST00000596940 RIPK4P57078 832 aa18.46■□□□□ 0.55
C19orf54-206ENST00000596940 DDX10Q13206 875 aaKnown RBP18.46■□□□□ 0.55
C19orf54-206ENST00000596940 KIF6Q6ZMV9 814 aa18.46■□□□□ 0.55
C19orf54-206ENST00000596940 AFDNP55196 1824 aaKnown RBP18.46■□□□□ 0.55
C19orf54-206ENST00000596940 SCN7AQ01118 1682 aa18.45■□□□□ 0.54
C19orf54-206ENST00000596940 VEGFAP15692 232 aaPredicted RBP18.45■□□□□ 0.54
C19orf54-206ENST00000596940 PRPF40BQ6NWY9 871 aaKnown RBP18.45■□□□□ 0.54
C19orf54-206ENST00000596940 THUMPD2Q9BTF0 503 aaKnown RBP18.45■□□□□ 0.54
C19orf54-206ENST00000596940 NYXQ9GZU5 481 aa18.45■□□□□ 0.54
C19orf54-206ENST00000596940 TAOK3Q9H2K8 898 aa18.45■□□□□ 0.54
C19orf54-206ENST00000596940 ZNF219Q9P2Y4 722 aaPredicted RBP18.45■□□□□ 0.54
C19orf54-206ENST00000596940 TSPYL4Q9UJ04 414 aa18.45■□□□□ 0.54
C19orf54-206ENST00000596940 RRP7AQ9Y3A4 280 aaKnown RBP18.45■□□□□ 0.54
C19orf54-206ENST00000596940 ERBB4Q15303 1308 aa18.45■□□□□ 0.54
C19orf54-206ENST00000596940 MYBBP1AQ9BQG0 1328 aaKnown RBP18.45■□□□□ 0.54
C19orf54-206ENST00000596940 LTBP3Q9NS15 1303 aa18.45■□□□□ 0.54
C19orf54-206ENST00000596940 KLRG2A4D1S0 409 aaPredicted RBP18.44■□□□□ 0.54
C19orf54-206ENST00000596940 ERFEQ4G0M1 354 aa18.44■□□□□ 0.54
C19orf54-206ENST00000596940 NGEFQ8N5V2 710 aa18.44■□□□□ 0.54
C19orf54-206ENST00000596940 ALDH1B1P30837 517 aa18.43■□□□□ 0.54
C19orf54-206ENST00000596940 SMC1BQ8NDV3 1235 aa18.43■□□□□ 0.54
C19orf54-206ENST00000596940 WDR43Q15061 677 aaKnown RBP eCLIP18.42■□□□□ 0.54
C19orf54-206ENST00000596940 HLFQ16534 295 aa18.42■□□□□ 0.54
C19orf54-206ENST00000596940 MAP3K15Q6ZN16 1313 aa18.42■□□□□ 0.54
C19orf54-206ENST00000596940 FAM177BA6PVY3 158 aa18.41■□□□□ 0.54
C19orf54-206ENST00000596940 MYL6BP14649 208 aa18.41■□□□□ 0.54
C19orf54-206ENST00000596940 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
C19orf54-206ENST00000596940 PRELPP51888 382 aa18.41■□□□□ 0.54
C19orf54-206ENST00000596940 CCDC93Q567U6 631 aa18.41■□□□□ 0.54
C19orf54-206ENST00000596940 RTKN2Q8IZC4 609 aa18.4■□□□□ 0.54
C19orf54-206ENST00000596940 DLEC1Q9Y238 1755 aa18.38■□□□□ 0.53
C19orf54-206ENST00000596940 TTLL7Q6ZT98 887 aa18.38■□□□□ 0.53
C19orf54-206ENST00000596940 C7orf43Q8WVR3 580 aa18.38■□□□□ 0.53
C19orf54-206ENST00000596940 RUNDC1Q96C34 613 aa18.38■□□□□ 0.53
C19orf54-206ENST00000596940 EIF2S2P20042 333 aaKnown RBP18.37■□□□□ 0.53
C19orf54-206ENST00000596940 PARP10Q53GL7 1025 aa18.37■□□□□ 0.53
C19orf54-206ENST00000596940 GIGYF2Q6Y7W6 1299 aaKnown RBP18.37■□□□□ 0.53
C19orf54-206ENST00000596940 ZBTB3Q9H5J0 574 aa18.37■□□□□ 0.53
C19orf54-206ENST00000596940 FKBP4Q02790 459 aaKnown RBP eCLIP18.36■□□□□ 0.53
C19orf54-206ENST00000596940 NEUROD2Q15784 382 aa18.36■□□□□ 0.53
C19orf54-206ENST00000596940 CRY2Q49AN0 593 aa18.36■□□□□ 0.53
C19orf54-206ENST00000596940 GRIPAP1Q4V328 841 aa18.36■□□□□ 0.53
C19orf54-206ENST00000596940 CC2D2BQ6DHV5 1058 aa18.36■□□□□ 0.53
C19orf54-206ENST00000596940 PPP1R42Q7Z4L9 355 aa18.36■□□□□ 0.53
C19orf54-206ENST00000596940 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
C19orf54-206ENST00000596940 IBTKQ9P2D0 1353 aaPredicted RBP18.35■□□□□ 0.53
C19orf54-206ENST00000596940 ZNF34Q8IZ26 560 aa18.35■□□□□ 0.53
C19orf54-206ENST00000596940 DNAJC5GQ8N7S2 189 aa18.35■□□□□ 0.53
C19orf54-206ENST00000596940 RPGRQ92834 1020 aaKnown RBP18.35■□□□□ 0.53
C19orf54-206ENST00000596940 GPTP24298 496 aa18.34■□□□□ 0.53
C19orf54-206ENST00000596940 NUTM1Q86Y26 1132 aa18.34■□□□□ 0.53
C19orf54-206ENST00000596940 CCDC146Q8IYE0 955 aa18.34■□□□□ 0.53
C19orf54-206ENST00000596940 SBF1O95248 1867 aa18.34■□□□□ 0.53
C19orf54-206ENST00000596940 ANKRD31Q8N7Z5 1873 aa18.34■□□□□ 0.53
C19orf54-206ENST00000596940 IQCA1LA6NCM1 817 aa18.33■□□□□ 0.52
C19orf54-206ENST00000596940 CHL1O00533 1208 aa18.33■□□□□ 0.52
C19orf54-206ENST00000596940 HOXA10P31260 410 aaPredicted RBP18.33■□□□□ 0.52
C19orf54-206ENST00000596940 HSP90AB3PQ58FF7 597 aa18.33■□□□□ 0.52
C19orf54-206ENST00000596940 TMX4Q9H1E5 349 aaPredicted RBP18.33■□□□□ 0.52
C19orf54-206ENST00000596940 TNRC6CQ9HCJ0 1690 aaKnown RBP18.32■□□□□ 0.52
C19orf54-206ENST00000596940 PDIA6Q15084 440 aa18.32■□□□□ 0.52
C19orf54-206ENST00000596940 SUSD4Q5VX71 490 aa18.32■□□□□ 0.52
C19orf54-206ENST00000596940 RBM17Q96I25 401 aaKnown RBP18.32■□□□□ 0.52
C19orf54-206ENST00000596940 ADAMTS8Q9UP79 889 aa18.32■□□□□ 0.52
C19orf54-206ENST00000596940 RNF123Q5XPI4 1314 aa18.31■□□□□ 0.52
C19orf54-206ENST00000596940 NLRP3Q96P20 1036 aa18.31■□□□□ 0.52
C19orf54-206ENST00000596940 CRAMP1Q96RY5 1269 aa18.31■□□□□ 0.52
C19orf54-206ENST00000596940 PSMD1Q99460 953 aa18.31■□□□□ 0.52
C19orf54-206ENST00000596940 UTP14AQ9BVJ6 771 aaKnown RBP18.31■□□□□ 0.52
C19orf54-206ENST00000596940 PRKRIP1Q9H875 184 aaPredicted RBP18.31■□□□□ 0.52
C19orf54-206ENST00000596940 LAS1LQ9Y4W2 734 aaKnown RBP18.31■□□□□ 0.52
C19orf54-206ENST00000596940 KDM3BQ7LBC6 1761 aa18.31■□□□□ 0.52
C19orf54-206ENST00000596940 RIC1Q4ADV7 1423 aa18.31■□□□□ 0.52
C19orf54-206ENST00000596940 LAMB4A4D0S4 1761 aa18.3■□□□□ 0.52
C19orf54-206ENST00000596940 UBN2Q6ZU65 1347 aa18.3■□□□□ 0.52
C19orf54-206ENST00000596940 POTECB2RU33 542 aa18.3■□□□□ 0.52
C19orf54-206ENST00000596940 DDNO94850 711 aaPredicted RBP18.3■□□□□ 0.52
C19orf54-206ENST00000596940 HOXB7P09629 217 aa18.3■□□□□ 0.52
C19orf54-206ENST00000596940 LRP10Q7Z4F1 713 aa18.3■□□□□ 0.52
C19orf54-206ENST00000596940 JDP2Q8WYK2 163 aa18.3■□□□□ 0.52
C19orf54-206ENST00000596940 KLRG1Q96E93 195 aa18.3■□□□□ 0.52
C19orf54-206ENST00000596940 DDX21Q9NR30 783 aaKnown RBP eCLIP18.3■□□□□ 0.52
C19orf54-206ENST00000596940 ZNF277Q9NRM2 450 aaPredicted RBP18.3■□□□□ 0.52
C19orf54-206ENST00000596940 COL11A2P13942 1736 aaPredicted RBP18.29■□□□□ 0.52
C19orf54-206ENST00000596940 NTSR2O95665 410 aa18.29■□□□□ 0.52
C19orf54-206ENST00000596940 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms