RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.35
GHDC-212ENST00000593209 NBPF7P0C2Y1 421 aaPredicted RBP23.45■■□□□ 1.34
GHDC-212ENST00000593209 TTC5Q8N0Z6 440 aa23.45■■□□□ 1.34
GHDC-212ENST00000593209 DDRGK1Q96HY6 314 aa23.45■■□□□ 1.34
GHDC-212ENST00000593209 FMNL2Q96PY5 1086 aa23.45■■□□□ 1.34
GHDC-212ENST00000593209 TNS1Q9HBL0 1735 aaKnown RBP23.45■■□□□ 1.34
GHDC-212ENST00000593209 BCL9O00512 1426 aa23.45■■□□□ 1.34
GHDC-212ENST00000593209 SNRPA1P09661 255 aaKnown RBP23.45■■□□□ 1.34
GHDC-212ENST00000593209 GSPT1P15170 499 aaKnown RBP23.45■■□□□ 1.34
GHDC-212ENST00000593209 TBC1D32Q96NH3 1257 aa23.45■■□□□ 1.34
GHDC-212ENST00000593209 NHSQ6T4R5 1651 aa23.44■■□□□ 1.34
GHDC-212ENST00000593209 EXOC6BQ9Y2D4 811 aa23.43■■□□□ 1.34
GHDC-212ENST00000593209 IBTKQ9P2D0 1353 aaPredicted RBP23.43■■□□□ 1.34
GHDC-212ENST00000593209 APBB1O00213 710 aa23.43■■□□□ 1.34
GHDC-212ENST00000593209 ALDH1L1O75891 902 aa23.42■■□□□ 1.34
GHDC-212ENST00000593209 SSH3Q8TE77 659 aa23.42■■□□□ 1.34
GHDC-212ENST00000593209 ASAP1Q9ULH1 1129 aa23.42■■□□□ 1.34
GHDC-212ENST00000593209 SOCS7O14512 581 aa23.41■■□□□ 1.34
GHDC-212ENST00000593209 POLA2Q14181 598 aa23.41■■□□□ 1.34
GHDC-212ENST00000593209 MYL6BP14649 208 aa23.4■■□□□ 1.34
GHDC-212ENST00000593209 TTC22Q5TAA0 569 aa23.4■■□□□ 1.34
GHDC-212ENST00000593209 ATG3Q9NT62 314 aa23.4■■□□□ 1.34
GHDC-212ENST00000593209 SALL3Q9BXA9 1300 aa23.4■■□□□ 1.34
GHDC-212ENST00000593209 BTAF1O14981 1849 aa23.4■■□□□ 1.34
GHDC-212ENST00000593209 AIMP1Q12904 312 aaKnown RBP23.4■■□□□ 1.34
GHDC-212ENST00000593209 CWF19L2Q2TBE0 894 aaKnown RBP23.4■■□□□ 1.34
GHDC-212ENST00000593209 XAGE3Q8WTP9 111 aa23.4■■□□□ 1.34
GHDC-212ENST00000593209 PIP4K2AP48426 406 aaPredicted RBP23.39■■□□□ 1.33
GHDC-212ENST00000593209 APBA3O96018 575 aa23.38■■□□□ 1.33
GHDC-212ENST00000593209 PPP1R42Q7Z4L9 355 aa23.38■■□□□ 1.33
GHDC-212ENST00000593209 DEFB132Q7Z7B7 95 aa23.38■■□□□ 1.33
GHDC-212ENST00000593209 BCL11BQ9C0K0 894 aaPredicted RBP23.38■■□□□ 1.33
GHDC-212ENST00000593209 DDX58O95786 925 aaKnown RBP23.38■■□□□ 1.33
GHDC-212ENST00000593209 IGKV5-2P06315 115 aa23.38■■□□□ 1.33
GHDC-212ENST00000593209 MFAP1P55081 439 aaKnown RBP23.38■■□□□ 1.33
GHDC-212ENST00000593209 SF3B2Q13435 895 aaKnown RBP23.38■■□□□ 1.33
GHDC-212ENST00000593209 LINS1Q8NG48 757 aa23.38■■□□□ 1.33
GHDC-212ENST00000593209 PTCD1O75127 700 aaKnown RBP23.37■■□□□ 1.33
GHDC-212ENST00000593209 COPS6Q7L5N1 327 aa23.37■■□□□ 1.33
GHDC-212ENST00000593209 UTYO14607 1347 aa23.37■■□□□ 1.33
GHDC-212ENST00000593209 TJP1Q07157 1748 aa23.36■■□□□ 1.33
GHDC-212ENST00000593209 TBC1D9Q6ZT07 1266 aa23.36■■□□□ 1.33
GHDC-212ENST00000593209 UPF2Q9HAU5 1272 aaKnown RBP23.36■■□□□ 1.33
GHDC-212ENST00000593209 NBPF26B4DH59 902 aa23.35■■□□□ 1.33
GHDC-212ENST00000593209 SLC4A3P48751 1232 aa23.35■■□□□ 1.33
GHDC-212ENST00000593209 NBPF14Q5TI25 921 aa23.35■■□□□ 1.33
GHDC-212ENST00000593209 NBPF10Q6P3W6 841 aaKnown RBP23.35■■□□□ 1.33
GHDC-212ENST00000593209 NBPF15Q8N660 670 aa23.35■■□□□ 1.33
GHDC-212ENST00000593209 BCL11AQ9H165 835 aa23.35■■□□□ 1.33
GHDC-212ENST00000593209 EN1Q05925 392 aaPredicted RBP23.34■■□□□ 1.33
GHDC-212ENST00000593209 MTX1Q13505 466 aa23.34■■□□□ 1.33
GHDC-212ENST00000593209 LRRCC1Q9C099 1032 aa23.34■■□□□ 1.33
GHDC-212ENST00000593209 CCDC125Q86Z20 511 aa23.33■■□□□ 1.33
GHDC-212ENST00000593209 KAZALD1Q96I82 304 aa23.33■■□□□ 1.33
GHDC-212ENST00000593209 OSBPL3Q9H4L5 887 aa23.33■■□□□ 1.33
GHDC-212ENST00000593209 ERBB4Q15303 1308 aa23.33■■□□□ 1.32
GHDC-212ENST00000593209 RIC3Q7Z5B4 369 aa23.33■■□□□ 1.32
GHDC-212ENST00000593209 METTL22Q9BUU2 404 aaPredicted RBP23.33■■□□□ 1.32
GHDC-212ENST00000593209 GRM8O00222 908 aa23.32■■□□□ 1.32
GHDC-212ENST00000593209 SRGAP3O43295 1099 aa23.32■■□□□ 1.32
GHDC-212ENST00000593209 C22orf23Q9BZE7 217 aa23.32■■□□□ 1.32
GHDC-212ENST00000593209 NEURL1BA8MQ27 555 aa23.31■■□□□ 1.32
GHDC-212ENST00000593209 CDC45O75419 566 aa23.31■■□□□ 1.32
GHDC-212ENST00000593209 PDE1AP54750 535 aa23.31■■□□□ 1.32
GHDC-212ENST00000593209 C9orf78Q9NZ63 289 aaPredicted RBP23.31■■□□□ 1.32
GHDC-212ENST00000593209 BAG6P46379 1132 aa23.31■■□□□ 1.32
GHDC-212ENST00000593209 SUCLG2Q96I99 432 aa23.31■■□□□ 1.32
GHDC-212ENST00000593209 SLC4A9Q96Q91 983 aa23.31■■□□□ 1.32
GHDC-212ENST00000593209 RBM42Q9BTD8 480 aaKnown RBP23.31■■□□□ 1.32
GHDC-212ENST00000593209 AK9Q5TCS8 1911 aa23.3■■□□□ 1.32
GHDC-212ENST00000593209 ANKRD13DQ6ZTN6 518 aa23.3■■□□□ 1.32
GHDC-212ENST00000593209 MYD88Q99836 296 aa23.3■■□□□ 1.32
GHDC-212ENST00000593209 SDSP20132 328 aa23.29■■□□□ 1.32
GHDC-212ENST00000593209 EZH2Q15910 746 aaKnown RBP23.29■■□□□ 1.32
GHDC-212ENST00000593209 SURF6O75683 361 aaKnown RBP23.28■■□□□ 1.32
GHDC-212ENST00000593209 GCKRQ14397 625 aa23.28■■□□□ 1.32
GHDC-212ENST00000593209 RAB11FIP3O75154 756 aa23.27■■□□□ 1.32
GHDC-212ENST00000593209 TSHZ3Q63HK5 1081 aa23.27■■□□□ 1.32
GHDC-212ENST00000593209 VSIG10Q8N0Z9 540 aa23.27■■□□□ 1.32
GHDC-212ENST00000593209 A1BGP04217 495 aa23.26■■□□□ 1.31
GHDC-212ENST00000593209 RBM25P49756 843 aaKnown RBP23.26■■□□□ 1.31
GHDC-212ENST00000593209 KCNQ4P56696 695 aa23.26■■□□□ 1.31
GHDC-212ENST00000593209 PALLDQ8WX93 1383 aa23.26■■□□□ 1.31
GHDC-212ENST00000593209 CAMKK2Q96RR4 588 aa23.26■■□□□ 1.31
GHDC-212ENST00000593209 BICC1Q9H694 974 aaKnown RBP23.26■■□□□ 1.31
GHDC-212ENST00000593209 STAP2Q9UGK3 403 aa23.26■■□□□ 1.31
GHDC-212ENST00000593209 MX1P20591 662 aa23.25■■□□□ 1.31
GHDC-212ENST00000593209 NEXNQ0ZGT2 675 aa23.25■■□□□ 1.31
GHDC-212ENST00000593209 DNAJC10Q8IXB1 793 aa23.25■■□□□ 1.31
GHDC-212ENST00000593209 PLBD2Q8NHP8 589 aa23.25■■□□□ 1.31
GHDC-212ENST00000593209 RHPN1Q8TCX5 695 aa23.25■■□□□ 1.31
GHDC-212ENST00000593209 IL1RAPL2Q9NP60 686 aa23.25■■□□□ 1.31
GHDC-212ENST00000593209 TTLL7Q6ZT98 887 aa23.24■■□□□ 1.31
GHDC-212ENST00000593209 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
GHDC-212ENST00000593209 LOC102724428A0A0B4J2F2 783 aa23.23■■□□□ 1.31
GHDC-212ENST00000593209 PLSCR1O15162 318 aa23.23■■□□□ 1.31
GHDC-212ENST00000593209 SIK1P57059 783 aa23.23■■□□□ 1.31
GHDC-212ENST00000593209 EPHA10Q5JZY3 1008 aa23.23■■□□□ 1.31
GHDC-212ENST00000593209 PROM2Q8N271 834 aa23.23■■□□□ 1.31
GHDC-212ENST00000593209 LY75O60449 1722 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms