RNA–Protein interactions for RNA: ENST00000592385.5

HDAC5-211, Transcript of histone deacetylase 5, humanhuman

TSL 5

Gene HDAC5, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-211ENST00000592385 LMOD2Q6P5Q4 547 aa18.46■□□□□ 0.55
HDAC5-211ENST00000592385 TTC14Q96N46 770 aa18.46■□□□□ 0.55
HDAC5-211ENST00000592385 ERBB3P21860 1342 aa18.46■□□□□ 0.55
HDAC5-211ENST00000592385 GRM8O00222 908 aa18.46■□□□□ 0.55
HDAC5-211ENST00000592385 NOL8Q76FK4 1167 aaKnown RBP18.46■□□□□ 0.55
HDAC5-211ENST00000592385 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.46■□□□□ 0.55
HDAC5-211ENST00000592385 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.55
HDAC5-211ENST00000592385 WDR33Q9C0J8 1336 aaKnown RBP18.45■□□□□ 0.54
HDAC5-211ENST00000592385 CWF19L2Q2TBE0 894 aaKnown RBP18.45■□□□□ 0.54
HDAC5-211ENST00000592385 CWC27Q6UX04 472 aaKnown RBP18.45■□□□□ 0.54
HDAC5-211ENST00000592385 DIAPH3Q9NSV4 1193 aa18.45■□□□□ 0.54
HDAC5-211ENST00000592385 IFIT2P09913 472 aaKnown RBP18.44■□□□□ 0.54
HDAC5-211ENST00000592385 ABCC6O95255 1503 aa18.44■□□□□ 0.54
HDAC5-211ENST00000592385 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
HDAC5-211ENST00000592385 ERBB4Q15303 1308 aa18.43■□□□□ 0.54
HDAC5-211ENST00000592385 FOXD4L5Q5VV16 416 aaPredicted RBP18.43■□□□□ 0.54
HDAC5-211ENST00000592385 FOXD4L4Q8WXT5 416 aaPredicted RBP18.43■□□□□ 0.54
HDAC5-211ENST00000592385 TMEM63CQ9P1W3 806 aa18.43■□□□□ 0.54
HDAC5-211ENST00000592385 LRSAM1Q6UWE0 723 aa18.43■□□□□ 0.54
HDAC5-211ENST00000592385 EVI5LQ96CN4 794 aa18.43■□□□□ 0.54
HDAC5-211ENST00000592385 RBM27Q9P2N5 1060 aaKnown RBP18.43■□□□□ 0.54
HDAC5-211ENST00000592385 PLEKHG2Q9H7P9 1386 aa18.43■□□□□ 0.54
HDAC5-211ENST00000592385 PRIM1P49642 420 aaKnown RBP18.42■□□□□ 0.54
HDAC5-211ENST00000592385 PDIA6Q15084 440 aa18.42■□□□□ 0.54
HDAC5-211ENST00000592385 RASEFQ8IZ41 740 aa18.42■□□□□ 0.54
HDAC5-211ENST00000592385 CHAMP1Q96JM3 812 aa18.42■□□□□ 0.54
HDAC5-211ENST00000592385 C5P01031 1676 aa18.42■□□□□ 0.54
HDAC5-211ENST00000592385 ZNF790Q6PG37 636 aa18.42■□□□□ 0.54
HDAC5-211ENST00000592385 PROSER2Q86WR7 435 aaPredicted RBP18.42■□□□□ 0.54
HDAC5-211ENST00000592385 SUCLG2Q96I99 432 aa18.42■□□□□ 0.54
HDAC5-211ENST00000592385 RBSNQ9H1K0 784 aa18.42■□□□□ 0.54
HDAC5-211ENST00000592385 LIMCH1Q9UPQ0 1083 aa18.42■□□□□ 0.54
HDAC5-211ENST00000592385 PA2G4Q9UQ80 394 aaKnown RBP18.42■□□□□ 0.54
HDAC5-211ENST00000592385 RAPGEF4Q8WZA2 1011 aa18.41■□□□□ 0.54
HDAC5-211ENST00000592385 KCNB2Q92953 911 aa18.41■□□□□ 0.54
HDAC5-211ENST00000592385 KAZALD1Q96I82 304 aa18.41■□□□□ 0.54
HDAC5-211ENST00000592385 C19orf44Q9H6X5 657 aa18.41■□□□□ 0.54
HDAC5-211ENST00000592385 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
HDAC5-211ENST00000592385 LARP1Q6PKG0 1096 aaKnown RBP18.41■□□□□ 0.54
HDAC5-211ENST00000592385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.41■□□□□ 0.54
HDAC5-211ENST00000592385 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
HDAC5-211ENST00000592385 HIP1O00291 1037 aa18.4■□□□□ 0.54
HDAC5-211ENST00000592385 AK2P54819 239 aa18.4■□□□□ 0.54
HDAC5-211ENST00000592385 AACSQ86V21 672 aa18.4■□□□□ 0.54
HDAC5-211ENST00000592385 TM6SF1Q9BZW5 370 aa18.4■□□□□ 0.54
HDAC5-211ENST00000592385 BICC1Q9H694 974 aaKnown RBP18.4■□□□□ 0.54
HDAC5-211ENST00000592385 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
HDAC5-211ENST00000592385 NSFL1CQ9UNZ2 370 aaKnown RBP18.4■□□□□ 0.54
HDAC5-211ENST00000592385 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.4■□□□□ 0.54
HDAC5-211ENST00000592385 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
HDAC5-211ENST00000592385 G3BP1Q13283 466 aaKnown RBP eCLIP18.4■□□□□ 0.549e-14■■□□□ 12.4
HDAC5-211ENST00000592385 RPAP1Q9BWH6 1393 aaPredicted RBP18.4■□□□□ 0.54
HDAC5-211ENST00000592385 HS1BP3Q53T59 392 aa18.39■□□□□ 0.54
HDAC5-211ENST00000592385 SYAP1Q96A49 352 aaPredicted RBP18.39■□□□□ 0.54
HDAC5-211ENST00000592385 SASH1O94885 1247 aa18.39■□□□□ 0.53
HDAC5-211ENST00000592385 RUFY3Q7L099 469 aa18.39■□□□□ 0.53
HDAC5-211ENST00000592385 IGKV5-2P06315 115 aa18.38■□□□□ 0.53
HDAC5-211ENST00000592385 RIC3Q7Z5B4 369 aa18.38■□□□□ 0.53
HDAC5-211ENST00000592385 TMEM87AQ8NBN3 555 aa18.38■□□□□ 0.53
HDAC5-211ENST00000592385 PDLIM2Q96JY6 352 aa18.38■□□□□ 0.53
HDAC5-211ENST00000592385 TCHHQ07283 1943 aa18.38■□□□□ 0.53
HDAC5-211ENST00000592385 MRC1P22897 1456 aa18.38■□□□□ 0.53
HDAC5-211ENST00000592385 COL18A1P39060 1754 aa18.38■□□□□ 0.53
HDAC5-211ENST00000592385 SYCE3A1L190 88 aa18.38■□□□□ 0.53
HDAC5-211ENST00000592385 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
HDAC5-211ENST00000592385 NEXNQ0ZGT2 675 aa18.38■□□□□ 0.53
HDAC5-211ENST00000592385 VPS53Q5VIR6 699 aa18.38■□□□□ 0.53
HDAC5-211ENST00000592385 PHKG2P15735 406 aa18.37■□□□□ 0.53
HDAC5-211ENST00000592385 CASTP20810 708 aaKnown RBP18.37■□□□□ 0.53
HDAC5-211ENST00000592385 AIMP1Q12904 312 aaKnown RBP18.37■□□□□ 0.53
HDAC5-211ENST00000592385 SNRKQ9NRH2 765 aa18.37■□□□□ 0.53
HDAC5-211ENST00000592385 ZC3H6P61129 1189 aaKnown RBP18.37■□□□□ 0.53
HDAC5-211ENST00000592385 PTH1RQ03431 593 aa18.37■□□□□ 0.53
HDAC5-211ENST00000592385 ZSCAN30Q86W11 494 aa18.37■□□□□ 0.53
HDAC5-211ENST00000592385 EAF2Q96CJ1 260 aaPredicted RBP18.37■□□□□ 0.53
HDAC5-211ENST00000592385 ZSWIM6Q9HCJ5 1215 aa18.37■□□□□ 0.53
HDAC5-211ENST00000592385 NEURL1BA8MQ27 555 aa18.36■□□□□ 0.53
HDAC5-211ENST00000592385 ZSCAN31Q96LW9 406 aaPredicted RBP18.36■□□□□ 0.53
HDAC5-211ENST00000592385 CCDC171Q6TFL3 1326 aa18.36■□□□□ 0.53
HDAC5-211ENST00000592385 NECTIN1Q15223 517 aa18.36■□□□□ 0.53
HDAC5-211ENST00000592385 SH2B1Q9NRF2 756 aaPredicted RBP18.36■□□□□ 0.53
HDAC5-211ENST00000592385 NLRP2Q9NX02 1062 aa18.36■□□□□ 0.53
HDAC5-211ENST00000592385 PHF14O94880 888 aa18.36■□□□□ 0.53
HDAC5-211ENST00000592385 ZSCAN22P10073 491 aaPredicted RBP18.36■□□□□ 0.53
HDAC5-211ENST00000592385 SLC39A6Q13433 755 aa18.36■□□□□ 0.53
HDAC5-211ENST00000592385 METTL22Q9BUU2 404 aaPredicted RBP18.36■□□□□ 0.53
HDAC5-211ENST00000592385 GCKRQ14397 625 aa18.35■□□□□ 0.53
HDAC5-211ENST00000592385 IFNL2Q8IZJ0 200 aa18.35■□□□□ 0.53
HDAC5-211ENST00000592385 SMC3Q9UQE7 1217 aa18.35■□□□□ 0.53
HDAC5-211ENST00000592385 CYP46A1Q9Y6A2 500 aa18.35■□□□□ 0.53
HDAC5-211ENST00000592385 MEGF6O75095 1541 aa18.35■□□□□ 0.53
HDAC5-211ENST00000592385 STX6O43752 255 aa18.35■□□□□ 0.53
HDAC5-211ENST00000592385 ZKSCAN1P17029 563 aaPredicted RBP18.35■□□□□ 0.53
HDAC5-211ENST00000592385 PRPF40BQ6NWY9 871 aaKnown RBP18.35■□□□□ 0.53
HDAC5-211ENST00000592385 USP48Q86UV5 1035 aa18.35■□□□□ 0.53
HDAC5-211ENST00000592385 JAKMIP1Q96N16 626 aaKnown RBP18.35■□□□□ 0.53
HDAC5-211ENST00000592385 PDRG1Q9NUG6 133 aa18.35■□□□□ 0.53
HDAC5-211ENST00000592385 NFATC2IPQ8NCF5 419 aa18.34■□□□□ 0.53
HDAC5-211ENST00000592385 XAGE3Q8WTP9 111 aa18.34■□□□□ 0.53
HDAC5-211ENST00000592385 ATP6V1DQ9Y5K8 247 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms