RNA–Protein interactions for RNA: ENST00000591994.1

RPRD1A-210, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2

Gene RPRD1A, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-210ENST00000591994 SLC9A9Q8IVB4 645 aa4.95□□□□□ -1.62
RPRD1A-210ENST00000591994 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.95□□□□□ -1.62
RPRD1A-210ENST00000591994 ELOA3Q8NG57 546 aa4.95□□□□□ -1.62
RPRD1A-210ENST00000591994 DCDC2BA2VCK2 349 aa4.94□□□□□ -1.62
RPRD1A-210ENST00000591994 ATP9BO43861 1147 aa4.94□□□□□ -1.62
RPRD1A-210ENST00000591994 STAG2Q8N3U4 1231 aa4.94□□□□□ -1.62
RPRD1A-210ENST00000591994 RHPN1Q8TCX5 695 aa4.94□□□□□ -1.62
RPRD1A-210ENST00000591994 ZDHHC1Q8WTX9 485 aa4.94□□□□□ -1.62
RPRD1A-210ENST00000591994 PRDM6Q9NQX0 595 aa4.94□□□□□ -1.62
RPRD1A-210ENST00000591994 ZNF232Q9UNY5 417 aa4.94□□□□□ -1.62
RPRD1A-210ENST00000591994 POTEAQ6S8J7 498 aa4.93□□□□□ -1.62
RPRD1A-210ENST00000591994 FCHSD1Q86WN1 690 aa4.93□□□□□ -1.62
RPRD1A-210ENST00000591994 KLF15Q9UIH9 416 aa4.93□□□□□ -1.62
RPRD1A-210ENST00000591994 ZBTB7BO15156 539 aaPredicted RBP4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 TXLNAP40222 546 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 KCNQ4P56696 695 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 PRRT3Q5FWE3 981 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 CCDC102BQ68D86 513 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 USP3Q9Y6I4 520 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 USP17L3A6NCW0 530 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 USP17L4A6NCW7 530 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 SPATA31C1P0DKV0 1188 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 HDGFL1Q5TGJ6 251 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 USP17L2Q6R6M4 530 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 USP17L1Q7RTZ2 530 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 SIX5Q8N196 739 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 SUV39H2Q9H5I1 410 aa4.92□□□□□ -1.62
RPRD1A-210ENST00000591994 LRRC69Q6ZNQ3 347 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 C14orf37Q86TY3 774 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 TNS4Q8IZW8 715 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 TPCN2Q8NHX9 752 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 TNFRSF25Q93038 417 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 NACC1Q96RE7 527 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 C1QTNF9BB2RNN3 333 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 APBA3O96018 575 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 SYT9Q86SS6 491 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 C7orf43Q8WVR3 580 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 MDFIQ99750 246 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 KCNH4Q9UQ05 1017 aa4.91□□□□□ -1.62
RPRD1A-210ENST00000591994 PARP3Q9Y6F1 533 aa4.9□□□□□ -1.62
RPRD1A-210ENST00000591994 PCBP4P57723 403 aaKnown RBP4.9□□□□□ -1.63
RPRD1A-210ENST00000591994 DEPDC4Q8N2C3 294 aa4.9□□□□□ -1.63
RPRD1A-210ENST00000591994 OGFOD1Q8N543 542 aa4.9□□□□□ -1.63
RPRD1A-210ENST00000591994 POM121Q96HA1 1249 aa4.9□□□□□ -1.63
RPRD1A-210ENST00000591994 PLVAPQ9BX97 442 aa4.9□□□□□ -1.63
RPRD1A-210ENST00000591994 STRN4Q9NRL3 753 aa4.9□□□□□ -1.63
RPRD1A-210ENST00000591994 MKRN1Q9UHC7 482 aaKnown RBP4.9□□□□□ -1.63
RPRD1A-210ENST00000591994 CD163Q86VB7 1156 aa4.89□□□□□ -1.63
RPRD1A-210ENST00000591994 GATA4P43694 442 aa4.89□□□□□ -1.63
RPRD1A-210ENST00000591994 CEP63Q96MT8 703 aa4.89□□□□□ -1.63
RPRD1A-210ENST00000591994 PPP1R12BO60237 982 aaPredicted RBP4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 SPEM2Q0P670 501 aa4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 LARP1Q6PKG0 1096 aaKnown RBP4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 PHACTR1Q9C0D0 580 aa4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 C11orf16Q9NQ32 467 aa4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 SEC13P55735 322 aa4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 CLDN10P78369 228 aa4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 SFSWAPQ12872 951 aaKnown RBP4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 IER5Q5VY09 327 aa4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 TRIM11Q96F44 468 aa4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 SUSD3Q96L08 255 aa4.88□□□□□ -1.63
RPRD1A-210ENST00000591994 POM121CA8CG34 1229 aa4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 TRIM28Q13263 835 aaKnown RBP4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 PCSK7Q16549 785 aa4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 TSPAN10Q9H1Z9 355 aaPredicted RBP4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 BRD7Q9NPI1 651 aa4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 HCN2Q9UL51 889 aa4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 ATAD2Q6PL18 1390 aa4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 SFI1A8K8P3 1242 aa4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 ADH7P40394 386 aa4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 ADAMTS19Q8TE59 1207 aa4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 UCN2Q96RP3 112 aa4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 HCN4Q9Y3Q4 1203 aa4.87□□□□□ -1.63
RPRD1A-210ENST00000591994 FURINP09958 794 aa4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 PROSER2Q86WR7 435 aaPredicted RBP4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 KIAA1024Q9UPX6 916 aa4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 EPB42P16452 691 aa4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 RASA1P20936 1047 aa4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 IGFBP4P22692 258 aa4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 TBCELQ5QJ74 424 aa4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 MICALL1Q8N3F8 863 aa4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 SLC30A3Q99726 388 aa4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 C2orf49Q9BVC5 232 aaPredicted RBP4.86□□□□□ -1.63
RPRD1A-210ENST00000591994 A6NJR5 290 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 C9orf172C9J069 976 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 CHRNA4P43681 627 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 TYRO3Q06418 890 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 RTN1Q16799 776 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 ERICH6Q7L0X2 663 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 ALDH16A1Q8IZ83 802 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 M0R082 166 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 DKK1O94907 266 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 ZNF417Q8TAU3 575 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 ZNF587Q96SQ5 575 aaPredicted RBP4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 STARD13Q9Y3M8 1113 aa4.85□□□□□ -1.63
RPRD1A-210ENST00000591994 ARID4AP29374 1257 aaPredicted RBP4.84□□□□□ -1.63
RPRD1A-210ENST00000591994 BTLAQ7Z6A9 289 aa4.84□□□□□ -1.63
RPRD1A-210ENST00000591994 FNBP4Q8N3X1 1017 aaPredicted RBP4.84□□□□□ -1.63
RPRD1A-210ENST00000591994 SCG3Q8WXD2 468 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms